Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is rpl34e

Identifier: 150401551

GI number: 150401551

Start: 1172336

End: 1172605

Strand: Reverse

Name: rpl34e

Synonym: Maeo_1128

Alternate gene names: 150401551

Gene position: 1172605-1172336 (Counterclockwise)

Preceding gene: 150401552

Following gene: 150401550

Centisome position: 74.71

GC content: 37.04

Gene sequence:

>270_bases
ATGCCTGCTCCAAGATTTAAGTCAGGTTCATTCAAAAAAATTTCAAAAAGAGGTCCTGGAAACAAAACTCTCACACACCA
CAGAAGAAGTAAAGTTTCAAAAGCTAAATGTGGTGCATGTGGAGCTCTCCTTAACGGAGTTCCAAGAGGACGAAAAATAG
AGATAGCAAAACTTTCAAAGACAGAGAAAAGACCAGAGAGACCATATGGTGGATTTTTATGTCCAAAATGTCTCAAAAGG
TTAATGATTGAGAAAGCAAGAAACTTATAG

Upstream 100 bases:

>100_bases
AAGGAGCTCCACCAATACCAGCAAAATATTTATATACTATAATTGCATACTAAATATACCATTTTAATACAAATTAAATG
AAACACAAAGAGGTTATAAT

Downstream 100 bases:

>100_bases
GGTGCGATAATGATAATAACTATTGGAGGACTTCCGGGAACTGGAACCACAACCATAGCAAAGCTAATATCTGAAAAATA
TAATTTAAATCATGTTTGTG

Product: 50S ribosomal protein L34e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MPAPRFKSGSFKKISKRGPGNKTLTHHRRSKVSKAKCGACGALLNGVPRGRKIEIAKLSKTEKRPERPYGGFLCPKCLKR
LMIEKARNL

Sequences:

>Translated_89_residues
MPAPRFKSGSFKKISKRGPGNKTLTHHRRSKVSKAKCGACGALLNGVPRGRKIEIAKLSKTEKRPERPYGGFLCPKCLKR
LMIEKARNL
>Mature_88_residues
PAPRFKSGSFKKISKRGPGNKTLTHHRRSKVSKAKCGACGALLNGVPRGRKIEIAKLSKTEKRPERPYGGFLCPKCLKRL
MIEKARNL

Specific function: Unknown

COG id: COG2174

COG function: function code J; Ribosomal protein L34E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L34e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL34_META3 (A6UW33)

Other databases:

- EMBL:   CP000743
- RefSeq:   YP_001325317.1
- STRING:   A6UW33
- GeneID:   5327334
- GenomeReviews:   CP000743_GR
- KEGG:   mae:Maeo_1128
- eggNOG:   arNOG12906
- HOGENOM:   HBG553083
- OMA:   RRKYVRT
- ProtClustDB:   PRK04059
- BioCyc:   MAEO419665:MAEO_1128-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00349
- InterPro:   IPR008195
- PANTHER:   PTHR10759
- PRINTS:   PR01250

Pfam domain/function: PF01199 Ribosomal_L34e

EC number: NA

Molecular weight: Translated: 9917; Mature: 9786

Theoretical pI: Translated: 11.75; Mature: 11.75

Prosite motif: PS01145 RIBOSOMAL_L34E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAPRFKSGSFKKISKRGPGNKTLTHHRRSKVSKAKCGACGALLNGVPRGRKIEIAKLSK
CCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHCCCC
TEKRPERPYGGFLCPKCLKRLMIEKARNL
CCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PAPRFKSGSFKKISKRGPGNKTLTHHRRSKVSKAKCGACGALLNGVPRGRKIEIAKLSK
CCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHCCCC
TEKRPERPYGGFLCPKCLKRLMIEKARNL
CCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA