Definition | Methanococcus aeolicus Nankai-3, complete genome. |
---|---|
Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is ybaR [H]
Identifier: 150401528
GI number: 150401528
Start: 1149372
End: 1150997
Strand: Reverse
Name: ybaR [H]
Synonym: Maeo_1105
Alternate gene names: 150401528
Gene position: 1150997-1149372 (Counterclockwise)
Preceding gene: 150401529
Following gene: 150401527
Centisome position: 73.34
GC content: 36.1
Gene sequence:
>1626_bases ATGACAGAAGAAAAAATACATACAAGTCAAACAAAAGAATTAAATAATAAATTGGTGGAGTTAGTAATTCCAAAAGATGG AAGTCTTAAAAATGATATATTGTCCGGATTAACCGTGGCATTGGCATTGGTTCCCGAGGCAATAGCATTTTCATTTATAT TGGGCATCGACCCAACAATAGGGCTTTATGCCGCATTTATGATGGGATTAATAGCTTCAATAGTGGGCGGTCGTCCGGGA ATGATTAGTGGTGCAACTGGTGCAGTAGCCGTAATATTTGCACCCCTTGTAATTCACCAAGTTCAAGTTGCAGGAATGGA AAGTGCATTGGGCTATTTATTTGTTGCAGTAGCACTTATGGGAATTATTCAAATAATTATGGGGATTTTGCGAGTTGGTA AGTTTGTTAGAATGATACCCCATCCTGTTATGCTGGGTTTTGTTAATGGTCTTGCCATAATTATATTCATGTCCCAGCTT GGGCAATTTTATGGCGCAGATGGTAATTTACTACCTATGCCTATTTTATTAATTATGCTTGTTCTTATTGCAATAACAAT GATCATAAGTAAATTTTTGCCCAAAATTACAAAGGCAGTCCCTGCTACGCTGGTGGCAATTATCGTAGTTACAATTATAT CTTATTTCTTAAATCAAGCTGGATATACAGTTCTCACTGTGCTTGATTTTGTAAAAATGATAGAGCCAACTAAATCAACA CTTGCAGCTTCTATTCCTTCATTCTCTATTCCACATATTCCATTTACAATGGATACATTTAAAACCATACTTCCATACTC AATTTTGGCGGCTGCTGTTGGTTTAATAGAGTCCCTTATGACATTGAGGTTAATTGACGAACTCACAGAAACAAGGGGGA GAAGTAATAGGGAATGTATCGGTCAAGGTTTGGCAAATTTGGTAAATGGATTTTTCGGTGGAATGGGGGGCTGTGCCATG ATTGGTCAAAGTATGATAAATATTCGTGCAGGGGGTAGGGGGCGAGTCTCTGGAATTGCGGCGGCTTTATTTCTACTGGC ATTTATTGTATGGGGAGCTCCCCTTATAGAAATGATACCACTTGCTGCCCTTGTGGGTGTAATGTTTATGGTAGTAATTG GAACATTTGAATGGTCTAGTCTCCGTATATTAAAGAAAATACCTCTATCTGATGCAATTATTATTGCACTGGTTTCTATT ATGACTGTGGTATTTGATTTAGCTATTGCAGTATTTGCGGGAATAATATTGGCAGCTATTATGTTTGCATGGGAACGGGG GAAAGATATATGGGCACACACAGAATCTATGAAAAATAAAAAAGTATATAGGCTTCACGGTCCGCTTTTCTTTGCATCGG TCACTAAATTTAAGGATTTATTTGATTTTAAAAATGATCCTGTTGATGTGGTTATCGATTTTGAAAAATCTAGGGTTTAT GACCATTCTGGAATTGAGGCAATAAATAATATTGCTGAAAAATATGCCCAATATGGTAAAAAATTGCATCTTCTTAATTT AAGTGAAGACTGTCAAAAATTAATTAAAAAGGCAGATAATATTGTGGAAGTTAGTATTCTTGATAATTTAATATGGCATG TTGCTGATGATAAATTAGATAACTAA
Upstream 100 bases:
>100_bases AATGATGTTAAATATTATGGATTTGACTAAAAATAATGTAAAAGTTAAAAAACTAAATAAATAAATAAATAAATAAATAA ATTAAATATGGTATTAAACA
Downstream 100 bases:
>100_bases TACAATGACTTAATAATTTTAATTAATTATATAAAAGATATTTATAAAATAAGATAAGTGAAAATAATGAGTTTAAAAGG AATATTATCCCATATTAAAG
Product: sulphate transporter
Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 541; Mature: 540
Protein sequence:
>541_residues MTEEKIHTSQTKELNNKLVELVIPKDGSLKNDILSGLTVALALVPEAIAFSFILGIDPTIGLYAAFMMGLIASIVGGRPG MISGATGAVAVIFAPLVIHQVQVAGMESALGYLFVAVALMGIIQIIMGILRVGKFVRMIPHPVMLGFVNGLAIIIFMSQL GQFYGADGNLLPMPILLIMLVLIAITMIISKFLPKITKAVPATLVAIIVVTIISYFLNQAGYTVLTVLDFVKMIEPTKST LAASIPSFSIPHIPFTMDTFKTILPYSILAAAVGLIESLMTLRLIDELTETRGRSNRECIGQGLANLVNGFFGGMGGCAM IGQSMINIRAGGRGRVSGIAAALFLLAFIVWGAPLIEMIPLAALVGVMFMVVIGTFEWSSLRILKKIPLSDAIIIALVSI MTVVFDLAIAVFAGIILAAIMFAWERGKDIWAHTESMKNKKVYRLHGPLFFASVTKFKDLFDFKNDPVDVVIDFEKSRVY DHSGIEAINNIAEKYAQYGKKLHLLNLSEDCQKLIKKADNIVEVSILDNLIWHVADDKLDN
Sequences:
>Translated_541_residues MTEEKIHTSQTKELNNKLVELVIPKDGSLKNDILSGLTVALALVPEAIAFSFILGIDPTIGLYAAFMMGLIASIVGGRPG MISGATGAVAVIFAPLVIHQVQVAGMESALGYLFVAVALMGIIQIIMGILRVGKFVRMIPHPVMLGFVNGLAIIIFMSQL GQFYGADGNLLPMPILLIMLVLIAITMIISKFLPKITKAVPATLVAIIVVTIISYFLNQAGYTVLTVLDFVKMIEPTKST LAASIPSFSIPHIPFTMDTFKTILPYSILAAAVGLIESLMTLRLIDELTETRGRSNRECIGQGLANLVNGFFGGMGGCAM IGQSMINIRAGGRGRVSGIAAALFLLAFIVWGAPLIEMIPLAALVGVMFMVVIGTFEWSSLRILKKIPLSDAIIIALVSI MTVVFDLAIAVFAGIILAAIMFAWERGKDIWAHTESMKNKKVYRLHGPLFFASVTKFKDLFDFKNDPVDVVIDFEKSRVY DHSGIEAINNIAEKYAQYGKKLHLLNLSEDCQKLIKKADNIVEVSILDNLIWHVADDKLDN >Mature_540_residues TEEKIHTSQTKELNNKLVELVIPKDGSLKNDILSGLTVALALVPEAIAFSFILGIDPTIGLYAAFMMGLIASIVGGRPGM ISGATGAVAVIFAPLVIHQVQVAGMESALGYLFVAVALMGIIQIIMGILRVGKFVRMIPHPVMLGFVNGLAIIIFMSQLG QFYGADGNLLPMPILLIMLVLIAITMIISKFLPKITKAVPATLVAIIVVTIISYFLNQAGYTVLTVLDFVKMIEPTKSTL AASIPSFSIPHIPFTMDTFKTILPYSILAAAVGLIESLMTLRLIDELTETRGRSNRECIGQGLANLVNGFFGGMGGCAMI GQSMINIRAGGRGRVSGIAAALFLLAFIVWGAPLIEMIPLAALVGVMFMVVIGTFEWSSLRILKKIPLSDAIIIALVSIM TVVFDLAIAVFAGIILAAIMFAWERGKDIWAHTESMKNKKVYRLHGPLFFASVTKFKDLFDFKNDPVDVVIDFEKSRVYD HSGIEAINNIAEKYAQYGKKLHLLNLSEDCQKLIKKADNIVEVSILDNLIWHVADDKLDN
Specific function: Possible Sulfate Transporter. [C]
COG id: COG0659
COG function: function code P; Sulfate permease and related transporters (MFS superfamily)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 STAS domain [H]
Homologues:
Organism=Homo sapiens, GI47131207, Length=539, Percent_Identity=21.3358070500928, Blast_Score=89, Evalue=2e-17, Organism=Homo sapiens, GI20336272, Length=539, Percent_Identity=21.3358070500928, Blast_Score=89, Evalue=2e-17, Organism=Homo sapiens, GI94721259, Length=476, Percent_Identity=21.4285714285714, Blast_Score=87, Evalue=6e-17, Organism=Homo sapiens, GI94721255, Length=476, Percent_Identity=21.4285714285714, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI94721253, Length=476, Percent_Identity=21.4285714285714, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI94721257, Length=476, Percent_Identity=21.4285714285714, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI262206105, Length=433, Percent_Identity=21.9399538106236, Blast_Score=83, Evalue=7e-16, Organism=Homo sapiens, GI262206075, Length=433, Percent_Identity=21.9399538106236, Blast_Score=83, Evalue=7e-16, Organism=Homo sapiens, GI262206069, Length=433, Percent_Identity=21.9399538106236, Blast_Score=83, Evalue=7e-16, Organism=Homo sapiens, GI262206063, Length=433, Percent_Identity=21.9399538106236, Blast_Score=83, Evalue=7e-16, Organism=Homo sapiens, GI4505697, Length=521, Percent_Identity=22.8406909788868, Blast_Score=80, Evalue=6e-15, Organism=Homo sapiens, GI100913030, Length=541, Percent_Identity=21.2569316081331, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI20336282, Length=584, Percent_Identity=20.8904109589041, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI16306483, Length=584, Percent_Identity=20.8904109589041, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI4557535, Length=503, Percent_Identity=22.0675944333996, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI16418457, Length=395, Percent_Identity=24.0506329113924, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI301601599, Length=395, Percent_Identity=24.0506329113924, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI87081859, Length=520, Percent_Identity=28.6538461538462, Blast_Score=162, Evalue=5e-41, Organism=Caenorhabditis elegans, GI17551690, Length=589, Percent_Identity=22.9202037351443, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17566848, Length=563, Percent_Identity=22.202486678508, Blast_Score=83, Evalue=3e-16, Organism=Caenorhabditis elegans, GI193203292, Length=494, Percent_Identity=19.6356275303644, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI86564196, Length=499, Percent_Identity=21.4428857715431, Blast_Score=75, Evalue=9e-14, Organism=Caenorhabditis elegans, GI86565215, Length=426, Percent_Identity=22.5352112676056, Blast_Score=73, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6325260, Length=481, Percent_Identity=20.7900207900208, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI24647160, Length=550, Percent_Identity=21.2727272727273, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI21355087, Length=550, Percent_Identity=21.2727272727273, Blast_Score=87, Evalue=4e-17, Organism=Drosophila melanogaster, GI21358229, Length=386, Percent_Identity=24.3523316062176, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI24649801, Length=570, Percent_Identity=20.5263157894737, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI85815873, Length=469, Percent_Identity=23.0277185501066, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI19922482, Length=352, Percent_Identity=23.8636363636364, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24663084, Length=128, Percent_Identity=30.46875, Blast_Score=70, Evalue=5e-12, Organism=Drosophila melanogaster, GI21357695, Length=128, Percent_Identity=30.46875, Blast_Score=70, Evalue=5e-12, Organism=Drosophila melanogaster, GI24651449, Length=139, Percent_Identity=30.2158273381295, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018045 - InterPro: IPR002645 - InterPro: IPR001902 - InterPro: IPR011547 [H]
Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]
EC number: NA
Molecular weight: Translated: 58727; Mature: 58596
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEEKIHTSQTKELNNKLVELVIPKDGSLKNDILSGLTVALALVPEAIAFSFILGIDPTI CCCCHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH GLYAAFMMGLIASIVGGRPGMISGATGAVAVIFAPLVIHQVQVAGMESALGYLFVAVALM HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIIQIIMGILRVGKFVRMIPHPVMLGFVNGLAIIIFMSQLGQFYGADGNLLPMPILLIML HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH VLIAITMIISKFLPKITKAVPATLVAIIVVTIISYFLNQAGYTVLTVLDFVKMIEPTKST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHH LAASIPSFSIPHIPFTMDTFKTILPYSILAAAVGLIESLMTLRLIDELTETRGRSNRECI HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH GQGLANLVNGFFGGMGGCAMIGQSMINIRAGGRGRVSGIAAALFLLAFIVWGAPLIEMIP HHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH LAALVGVMFMVVIGTFEWSSLRILKKIPLSDAIIIALVSIMTVVFDLAIAVFAGIILAAI HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MFAWERGKDIWAHTESMKNKKVYRLHGPLFFASVTKFKDLFDFKNDPVDVVIDFEKSRVY HHHHHCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECHHHHCC DHSGIEAINNIAEKYAQYGKKLHLLNLSEDCQKLIKKADNIVEVSILDNLIWHVADDKLD CHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCC N C >Mature Secondary Structure TEEKIHTSQTKELNNKLVELVIPKDGSLKNDILSGLTVALALVPEAIAFSFILGIDPTI CCCHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH GLYAAFMMGLIASIVGGRPGMISGATGAVAVIFAPLVIHQVQVAGMESALGYLFVAVALM HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIIQIIMGILRVGKFVRMIPHPVMLGFVNGLAIIIFMSQLGQFYGADGNLLPMPILLIML HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH VLIAITMIISKFLPKITKAVPATLVAIIVVTIISYFLNQAGYTVLTVLDFVKMIEPTKST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHH LAASIPSFSIPHIPFTMDTFKTILPYSILAAAVGLIESLMTLRLIDELTETRGRSNRECI HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH GQGLANLVNGFFGGMGGCAMIGQSMINIRAGGRGRVSGIAAALFLLAFIVWGAPLIEMIP HHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH LAALVGVMFMVVIGTFEWSSLRILKKIPLSDAIIIALVSIMTVVFDLAIAVFAGIILAAI HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MFAWERGKDIWAHTESMKNKKVYRLHGPLFFASVTKFKDLFDFKNDPVDVVIDFEKSRVY HHHHHCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECHHHHCC DHSGIEAINNIAEKYAQYGKKLHLLNLSEDCQKLIKKADNIVEVSILDNLIWHVADDKLD CHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]
Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9274029; 9384377 [H]