Definition | Methanococcus aeolicus Nankai-3, complete genome. |
---|---|
Accession | NC_009635 |
Length | 1,569,500 |
Click here to switch to the map view.
The map label for this gene is 150400708
Identifier: 150400708
GI number: 150400708
Start: 299392
End: 299733
Strand: Direct
Name: 150400708
Synonym: Maeo_0273
Alternate gene names: NA
Gene position: 299392-299733 (Clockwise)
Preceding gene: 150400707
Following gene: 150400709
Centisome position: 19.08
GC content: 34.21
Gene sequence:
>342_bases ATGACAAATTATCATGTAACATTACAAGCGCCTTATATTGTGAAGAATATTGAAGATGTTGAAGATGCCCTTGGTGTGGC GATATCGCATATAGGAAAAATATTGAATAAAAAAGGAATGGAATATGTGGATATAGATGTTGGGTTAACCATATGTCCAA AATGTGGAGAACCTATTGATTGTGTTTTGGTGGTTGCAAGAACAGCGATTGTAGGAATATTGTTGTCTATGAAAATATTC AATGCCGAATCATCAGAACATGCTGTTAGGATTGCAAAATCATCATTAGGTAGAACTTTAAAAGACATCCCACTTGAAAT TGTGGACGTAGTAGAAATCTAA
Upstream 100 bases:
>100_bases AATCAAAGATTTTGAATTTTCCTTCGGAAAATATGTCAATATTGTTGGTCATTGTGAATAAATTTTTTGAACATATTATA AATTAAATTGGTGAGATTAA
Downstream 100 bases:
>100_bases AAATATGGATGTTATATTATATTATATTATATTATATATTAATTAAAGATTCAATATAAATATATAACATATTTTGGGAA GGGGGCGAAACGATGGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MTNYHVTLQAPYIVKNIEDVEDALGVAISHIGKILNKKGMEYVDIDVGLTICPKCGEPIDCVLVVARTAIVGILLSMKIF NAESSEHAVRIAKSSLGRTLKDIPLEIVDVVEI
Sequences:
>Translated_113_residues MTNYHVTLQAPYIVKNIEDVEDALGVAISHIGKILNKKGMEYVDIDVGLTICPKCGEPIDCVLVVARTAIVGILLSMKIF NAESSEHAVRIAKSSLGRTLKDIPLEIVDVVEI >Mature_112_residues TNYHVTLQAPYIVKNIEDVEDALGVAISHIGKILNKKGMEYVDIDVGLTICPKCGEPIDCVLVVARTAIVGILLSMKIFN AESSEHAVRIAKSSLGRTLKDIPLEIVDVVEI
Specific function: Unknown
COG id: COG1885
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0212 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y273_META3 (A6UTP0)
Other databases:
- EMBL: CP000743 - RefSeq: YP_001324474.1 - STRING: A6UTP0 - GeneID: 5327030 - GenomeReviews: CP000743_GR - KEGG: mae:Maeo_0273 - eggNOG: arNOG11587 - HOGENOM: HBG497080 - OMA: AHFESAF - ProtClustDB: PRK03922 - BioCyc: MAEO419665:MAEO_0273-MONOMER - HAMAP: MF_01223 - InterPro: IPR007564 - PIRSF: PIRSF016934 - ProDom: PD020367
Pfam domain/function: PF04475 DUF555
EC number: NA
Molecular weight: Translated: 12288; Mature: 12156
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNYHVTLQAPYIVKNIEDVEDALGVAISHIGKILNKKGMEYVDIDVGLTICPKCGEPID CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEECCCCCCCHH CVLVVARTAIVGILLSMKIFNAESSEHAVRIAKSSLGRTLKDIPLEIVDVVEI HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHCCHHHHHEECC >Mature Secondary Structure TNYHVTLQAPYIVKNIEDVEDALGVAISHIGKILNKKGMEYVDIDVGLTICPKCGEPID CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEECCCCCCCHH CVLVVARTAIVGILLSMKIFNAESSEHAVRIAKSSLGRTLKDIPLEIVDVVEI HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHCCHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA