Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
---|---|
Accession | NC_009636 |
Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is cysZ [C]
Identifier: 150398603
GI number: 150398603
Start: 3621988
End: 3622740
Strand: Direct
Name: cysZ [C]
Synonym: Smed_3414
Alternate gene names: 150398603
Gene position: 3621988-3622740 (Clockwise)
Preceding gene: 150398599
Following gene: 150398604
Centisome position: 95.77
GC content: 62.55
Gene sequence:
>753_bases ATGATATTCGATGCGGCGCGCCTTGCCTTCGCCAATCTCTTTGCGACGGAGACGCGCACGGTCTTCTGGAAGGTCATTGG GTTGACGTTGCTGGCGCTCGTCGCACTCTGGTTCGCGCTGCGCGAAGTTTTCGTCTGGCTTGCTCTGCCCTGGATCGATG CACTCATGCCGGGCACACCCGACTGGGCGGGATGGCTCACTTTCGTTGTCGGATTATTCGCAAGTCTCGGCCTCGCACTC GCACTGGCGCTGCTGCTGGCGCCGGTGACGGCGCTGATTGCCGGCTTCTTTCTCGACGATGTGGCCGAGGTGGTCGAGAA GCGTGATTATCCCGCCGAGGCGCCCGGCACGCCGCTGCCTCTGGTAGAGGCGATCACCGGTTCGGCGAAATTCCTCGGAG TCGTCGTTCTCGGCAATATCGTCGCGTTGTTCCTGTTGTTGGTGCCGGGCGTCAATATCGTCGCCTTCTTCCTCGTCAAC GGCTATCTGCTCGGCCGCGAATTCTTCGAGTTCGCCGCCATGCGCCATCGTCCGCCTGCGGAGGCGCGCCTCTTCCGCGC CAAGCATCGCTCGACGGTGTTTCTCGCCGGCCTCTTGCTGGCGGCGTTCCTTGCCGTGCCTCTGCTTAATCTGCTGACGC CGCTCTTTGCCGCGGGGATGATGGTACACCTGCACAAGATGCTTTCAACGCGAGACCCCGACTTTGCGGGCACCGCAACT GCGGGTGCGCGGGGATTGAAGTCGACGGCATGA
Upstream 100 bases:
>100_bases GGAAACGATCGTCGCGGGAAAACCGCTTCACTTGCCTTGTGCCTTTCAACCGCTCTGCCTACATGCCTTTCGGTTCAACT CATCGGCCAGGGAGACGGAC
Downstream 100 bases:
>100_bases AGCAATCGCCGAGGGCCTTGAACAGAGGCGCGCGGACGCTGCCTTGACACGCGACGGCGTGTCGTCATTCTGCGCCCGAC CTCTACAGCGCCGTGCGTCT
Product: CysZ-like protein
Products: NA
Alternate protein names: Carbamoyl-Phosphate Synthase Large Chain; CysZ Protein
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MIFDAARLAFANLFATETRTVFWKVIGLTLLALVALWFALREVFVWLALPWIDALMPGTPDWAGWLTFVVGLFASLGLAL ALALLLAPVTALIAGFFLDDVAEVVEKRDYPAEAPGTPLPLVEAITGSAKFLGVVVLGNIVALFLLLVPGVNIVAFFLVN GYLLGREFFEFAAMRHRPPAEARLFRAKHRSTVFLAGLLLAAFLAVPLLNLLTPLFAAGMMVHLHKMLSTRDPDFAGTAT AGARGLKSTA
Sequences:
>Translated_250_residues MIFDAARLAFANLFATETRTVFWKVIGLTLLALVALWFALREVFVWLALPWIDALMPGTPDWAGWLTFVVGLFASLGLAL ALALLLAPVTALIAGFFLDDVAEVVEKRDYPAEAPGTPLPLVEAITGSAKFLGVVVLGNIVALFLLLVPGVNIVAFFLVN GYLLGREFFEFAAMRHRPPAEARLFRAKHRSTVFLAGLLLAAFLAVPLLNLLTPLFAAGMMVHLHKMLSTRDPDFAGTAT AGARGLKSTA >Mature_250_residues MIFDAARLAFANLFATETRTVFWKVIGLTLLALVALWFALREVFVWLALPWIDALMPGTPDWAGWLTFVVGLFASLGLAL ALALLLAPVTALIAGFFLDDVAEVVEKRDYPAEAPGTPLPLVEAITGSAKFLGVVVLGNIVALFLLLVPGVNIVAFFLVN GYLLGREFFEFAAMRHRPPAEARLFRAKHRSTVFLAGLLLAAFLAVPLLNLLTPLFAAGMMVHLHKMLSTRDPDFAGTAT AGARGLKSTA
Specific function: Possibly Involved In Sulfate Transport. [C]
COG id: COG2981
COG function: function code E; Uncharacterized protein involved in cysteine biosynthesis
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26976; Mature: 26976
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFDAARLAFANLFATETRTVFWKVIGLTLLALVALWFALREVFVWLALPWIDALMPGTP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DWAGWLTFVVGLFASLGLALALALLLAPVTALIAGFFLDDVAEVVEKRDYPAEAPGTPLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH LVEAITGSAKFLGVVVLGNIVALFLLLVPGVNIVAFFLVNGYLLGREFFEFAAMRHRPPA HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH EARLFRAKHRSTVFLAGLLLAAFLAVPLLNLLTPLFAAGMMVHLHKMLSTRDPDFAGTAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH AGARGLKSTA HHHCCCCCCC >Mature Secondary Structure MIFDAARLAFANLFATETRTVFWKVIGLTLLALVALWFALREVFVWLALPWIDALMPGTP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DWAGWLTFVVGLFASLGLALALALLLAPVTALIAGFFLDDVAEVVEKRDYPAEAPGTPLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH LVEAITGSAKFLGVVVLGNIVALFLLLVPGVNIVAFFLVNGYLLGREFFEFAAMRHRPPA HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH EARLFRAKHRSTVFLAGLLLAAFLAVPLLNLLTPLFAAGMMVHLHKMLSTRDPDFAGTAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH AGARGLKSTA HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA