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The map label for this gene is yteT [H]

Identifier: 150398524

GI number: 150398524

Start: 3533307

End: 3534596

Strand: Direct

Name: yteT [H]

Synonym: Smed_3335

Alternate gene names: 150398524

Gene position: 3533307-3534596 (Clockwise)

Preceding gene: 150398523

Following gene: 150398525

Centisome position: 93.43

GC content: 61.09

Gene sequence:

>1290_bases
ATGGACAACAAGCGTCGCTTTGCGCTGGTCGGCACCGGCAATCGCGGAACCACCATGTGGGGCAAGGATCTTCTCGCCGG
ATGGCGCGGACTTGTCGACCTCGTCGCCATTGCGGACACCAACTCGCTCAGGGCCGAGCGCGCCCGGACGATGATCGCAA
CCAATGCGCCGATCTATGACAGTGTCGATTCGATGCTTGCCGAAACGCGCCCCGATCTCGTCATAGTCTGTACGCCTGAC
GATACGCATGACGACATCGTCGTGCGTGCGCTCGAATCGGGTGCCGACGTCATCACCGAAAAACCGATGTCGACCACGGT
TGAGAAGATCCGGCGGATTCTCGAAGCCGAGAAGCGCACCGGCCGACGGGTGGATGTGTCCTTCAACTACCGTTTTGCGC
CGACGGCGGCACGCATAAAGGAACTCCTGAACGCCGGTGAGATCGGCCGCATCACCTCCGTAGACTTCCATTGGTATCTG
GATACAAGGCACGGCGCCGATTATTTCCGCCGCTGGCATGCCTATGCGGAACGCTCGGGAAGCCTTTTCGTGCACAAGGC
GACCCACCATTTCGACCTCCTGAACTGGTATCTGGACAGCGATCCGGACTCCGTCGGTGCCTTTGCCGACCTGCAGATGT
ACGGCCGCAAGGGACCGTTTCGCGGGCCGCGCTGCAAGCTCTGTCCCCACAAGAGCGAGTGCGACTTCTATCTCGACCTC
GAAGCCGATCCGTTTCTCGACGCGCTCTACGAGGAACCCTCCGAAATCGACGGCTATTTCCGCGACGGTTGCGTCTTTCG
AGAGGACATCGACATACCGGACACGATGGTTGCGAATATCCGGTATCGCAACGACGTCCACGTTTCCTATTCGCTCAACA
CCTTCCAGCCGATCGAGGGCCACCACATCGCCTTCAACGGAACGAAGGGCAGGATAGAGCTTCGCCAGTACGAAGATCAG
CCGTGGGAGGCGCCGCCGGAAGACGTAATCCTGCTCGTCCGCAATTTCCCCAAGGGCAAGGCTGCGGTGGAGCGCATCAC
GGTTCCGCATTCCGCCGGCGGCCACTACGGCGGCGACGATAGACTTCGAAATACGCTCTTCAAGCCGGGCGCGACCGATC
CTTTGGGGCAGCGCGCAGGGGCCCGGGCGGGTGCCATGTCCGTGCTTTGCGGCATTGCCGCTCTGGAGAGCGCCCGCAAG
GGCAAGGTTGTGCGGCTTGCCGATTTAATGCCGGAATTGTTCGTGGAGGAGACGCAGGCGGTAAGCAGGCTTGCGGCGAA
TGGCGCATAG

Upstream 100 bases:

>100_bases
TTCGCCAAGTCCGATCTCAAACATGTATGATAAATTTACATGTAAGTACCGCTGCCGCGGAGAGCGGCGTCACCCCGAAA
CAGAATTGCACGAGGGAATG

Downstream 100 bases:

>100_bases
AACGCCAGCAAACTTTTTTCCTCTTGAACCTCTAGTCGCTAGAGGAGTTAGCCTGCTCTTGGTTTCGAAGGAGCAGATAA
TGACAGGCATATTTCGGGAA

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MDNKRRFALVGTGNRGTTMWGKDLLAGWRGLVDLVAIADTNSLRAERARTMIATNAPIYDSVDSMLAETRPDLVIVCTPD
DTHDDIVVRALESGADVITEKPMSTTVEKIRRILEAEKRTGRRVDVSFNYRFAPTAARIKELLNAGEIGRITSVDFHWYL
DTRHGADYFRRWHAYAERSGSLFVHKATHHFDLLNWYLDSDPDSVGAFADLQMYGRKGPFRGPRCKLCPHKSECDFYLDL
EADPFLDALYEEPSEIDGYFRDGCVFREDIDIPDTMVANIRYRNDVHVSYSLNTFQPIEGHHIAFNGTKGRIELRQYEDQ
PWEAPPEDVILLVRNFPKGKAAVERITVPHSAGGHYGGDDRLRNTLFKPGATDPLGQRAGARAGAMSVLCGIAALESARK
GKVVRLADLMPELFVEETQAVSRLAANGA

Sequences:

>Translated_429_residues
MDNKRRFALVGTGNRGTTMWGKDLLAGWRGLVDLVAIADTNSLRAERARTMIATNAPIYDSVDSMLAETRPDLVIVCTPD
DTHDDIVVRALESGADVITEKPMSTTVEKIRRILEAEKRTGRRVDVSFNYRFAPTAARIKELLNAGEIGRITSVDFHWYL
DTRHGADYFRRWHAYAERSGSLFVHKATHHFDLLNWYLDSDPDSVGAFADLQMYGRKGPFRGPRCKLCPHKSECDFYLDL
EADPFLDALYEEPSEIDGYFRDGCVFREDIDIPDTMVANIRYRNDVHVSYSLNTFQPIEGHHIAFNGTKGRIELRQYEDQ
PWEAPPEDVILLVRNFPKGKAAVERITVPHSAGGHYGGDDRLRNTLFKPGATDPLGQRAGARAGAMSVLCGIAALESARK
GKVVRLADLMPELFVEETQAVSRLAANGA
>Mature_429_residues
MDNKRRFALVGTGNRGTTMWGKDLLAGWRGLVDLVAIADTNSLRAERARTMIATNAPIYDSVDSMLAETRPDLVIVCTPD
DTHDDIVVRALESGADVITEKPMSTTVEKIRRILEAEKRTGRRVDVSFNYRFAPTAARIKELLNAGEIGRITSVDFHWYL
DTRHGADYFRRWHAYAERSGSLFVHKATHHFDLLNWYLDSDPDSVGAFADLQMYGRKGPFRGPRCKLCPHKSECDFYLDL
EADPFLDALYEEPSEIDGYFRDGCVFREDIDIPDTMVANIRYRNDVHVSYSLNTFQPIEGHHIAFNGTKGRIELRQYEDQ
PWEAPPEDVILLVRNFPKGKAAVERITVPHSAGGHYGGDDRLRNTLFKPGATDPLGQRAGARAGAMSVLCGIAALESARK
GKVVRLADLMPELFVEETQAVSRLAANGA

Specific function: May play a role in the degradation of type I rhamnogalacturonan derived from plant cell walls [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=146, Percent_Identity=29.4520547945205, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1789848, Length=122, Percent_Identity=31.1475409836066, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 48061; Mature: 48061

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKRRFALVGTGNRGTTMWGKDLLAGWRGLVDLVAIADTNSLRAERARTMIATNAPIYD
CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEEECCCCHH
SVDSMLAETRPDLVIVCTPDDTHDDIVVRALESGADVITEKPMSTTVEKIRRILEAEKRT
HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHC
GRRVDVSFNYRFAPTAARIKELLNAGEIGRITSVDFHWYLDTRHGADYFRRWHAYAERSG
CCEEEEEEEEEECCHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHCCC
SLFVHKATHHFDLLNWYLDSDPDSVGAFADLQMYGRKGPFRGPRCKLCPHKSECDFYLDL
CEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEC
EADPFLDALYEEPSEIDGYFRDGCVFREDIDIPDTMVANIRYRNDVHVSYSLNTFQPIEG
CCCHHHHHHHCCCHHHCCHHHCCEEEEECCCCCCCEEEEEEECCEEEEEEECCCCCCCCC
HHIAFNGTKGRIELRQYEDQPWEAPPEDVILLVRNFPKGKAAVERITVPHSAGGHYGGDD
CEEEEECCCCEEEEEECCCCCCCCCHHHEEEEEECCCCCHHHHHEEECCCCCCCCCCCHH
RLRNTLFKPGATDPLGQRAGARAGAMSVLCGIAALESARKGKVVRLADLMPELFVEETQA
HHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHH
VSRLAANGA
HHHHHCCCC
>Mature Secondary Structure
MDNKRRFALVGTGNRGTTMWGKDLLAGWRGLVDLVAIADTNSLRAERARTMIATNAPIYD
CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEEECCCCHH
SVDSMLAETRPDLVIVCTPDDTHDDIVVRALESGADVITEKPMSTTVEKIRRILEAEKRT
HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHC
GRRVDVSFNYRFAPTAARIKELLNAGEIGRITSVDFHWYLDTRHGADYFRRWHAYAERSG
CCEEEEEEEEEECCHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHCCC
SLFVHKATHHFDLLNWYLDSDPDSVGAFADLQMYGRKGPFRGPRCKLCPHKSECDFYLDL
CEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEC
EADPFLDALYEEPSEIDGYFRDGCVFREDIDIPDTMVANIRYRNDVHVSYSLNTFQPIEG
CCCHHHHHHHCCCHHHCCHHHCCEEEEECCCCCCCEEEEEEECCEEEEEEECCCCCCCCC
HHIAFNGTKGRIELRQYEDQPWEAPPEDVILLVRNFPKGKAAVERITVPHSAGGHYGGDD
CEEEEECCCCEEEEEECCCCCCCCCHHHEEEEEECCCCCHHHHHEEECCCCCCCCCCCHH
RLRNTLFKPGATDPLGQRAGARAGAMSVLCGIAALESARKGKVVRLADLMPELFVEETQA
HHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHH
VSRLAANGA
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]