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The map label for this gene is glxC [H]

Identifier: 150398482

GI number: 150398482

Start: 3484678

End: 3485364

Strand: Direct

Name: glxC [H]

Synonym: Smed_3292

Alternate gene names: 150398482

Gene position: 3484678-3485364 (Clockwise)

Preceding gene: 150398481

Following gene: 150398483

Centisome position: 92.14

GC content: 61.43

Gene sequence:

>687_bases
ATGCCAGTGATCGATCTCGCCACCACGCCGCTGCGTGAACTCAACAGCGCCCTCCATAATATTCAGAAGGGCTCAAACGA
CCTGTCCTACGAAGTCGCCAATCCTCGCGGCAGTCATGCCGTTGCCGTCGGGGTAAGCGGCCCCGTACTGGTCGATGTGA
ACGGCTCCGTCGGCTACTACTGCGCCGGCATGAACGACGGCGGAACGATCACGGTCCATGGCTCGGCAGGCCCTGGTGTC
GCGGAAAACATGATGTCCGGCAAGGTCGTCATCGAAGGCGACGCCAGCCAGTATGCCGGCGCGACAGGCCGCGGTGGCCT
GCTCGTGATAAAGGGCAACGCGGCGTCGCGCTGCGGCATTTCCATGAAAGGCATCGATATCGTCGTTCACGGGAATATCG
GCCATATGTCGGCTTTCATGGGTCAGTCGGGCCATCTCGTCGTGCTCGGCGACGCGGGCGATGCACTGGGCGACAGCCTC
TACGAAGCCAAGCTCTTCGTGCGCGGCACCGTCAAAAGCCTGGGCGCCGATTGCATCGAGAAGGAGATGCGGCCGGAGCA
CCTGCAAAAGCTCGCCGAGCTTCTGGAAAAGGCCGGCGTCAAGGATGTCCGCCCGGAAGAGTTCAAGCGCTACGGCTCGG
CCCGCAAGCTCTACAATTTCAACATCGACAACGCAGACGCGTATTAA

Upstream 100 bases:

>100_bases
GCGCGCGCATCTGGGAGCCGGAGCCTGCGACCGTCTACTTCTGGGATCATCAGAAGGCCGCCTGACGGGTGTTCCGCCCC
TTTCCGAGGATTATTCAAAC

Downstream 100 bases:

>100_bases
AGGCAAGGGACCAGTATGAGCTATCACAACCCCTACACCCCGCCGCGCAAGTCCGCGACCTTCGACGACTATACCCTTGC
GGAAATCCGCCGTGCGGCGG

Product: glutamate synthase subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MPVIDLATTPLRELNSALHNIQKGSNDLSYEVANPRGSHAVAVGVSGPVLVDVNGSVGYYCAGMNDGGTITVHGSAGPGV
AENMMSGKVVIEGDASQYAGATGRGGLLVIKGNAASRCGISMKGIDIVVHGNIGHMSAFMGQSGHLVVLGDAGDALGDSL
YEAKLFVRGTVKSLGADCIEKEMRPEHLQKLAELLEKAGVKDVRPEEFKRYGSARKLYNFNIDNADAY

Sequences:

>Translated_228_residues
MPVIDLATTPLRELNSALHNIQKGSNDLSYEVANPRGSHAVAVGVSGPVLVDVNGSVGYYCAGMNDGGTITVHGSAGPGV
AENMMSGKVVIEGDASQYAGATGRGGLLVIKGNAASRCGISMKGIDIVVHGNIGHMSAFMGQSGHLVVLGDAGDALGDSL
YEAKLFVRGTVKSLGADCIEKEMRPEHLQKLAELLEKAGVKDVRPEEFKRYGSARKLYNFNIDNADAY
>Mature_227_residues
PVIDLATTPLRELNSALHNIQKGSNDLSYEVANPRGSHAVAVGVSGPVLVDVNGSVGYYCAGMNDGGTITVHGSAGPGVA
ENMMSGKVVIEGDASQYAGATGRGGLLVIKGNAASRCGISMKGIDIVVHGNIGHMSAFMGQSGHLVVLGDAGDALGDSLY
EAKLFVRGTVKSLGADCIEKEMRPEHLQKLAELLEKAGVKDVRPEEFKRYGSARKLYNFNIDNADAY

Specific function: Unknown

COG id: COG0070

COG function: function code E; Glutamate synthase domain 3

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fwdC/fmdC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002489
- InterPro:   IPR012061 [H]

Pfam domain/function: PF01493 GXGXG [H]

EC number: NA

Molecular weight: Translated: 23818; Mature: 23687

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVIDLATTPLRELNSALHNIQKGSNDLSYEVANPRGSHAVAVGVSGPVLVDVNGSVGYY
CCEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEECCCCEEEEECCCCEEE
CAGMNDGGTITVHGSAGPGVAENMMSGKVVIEGDASQYAGATGRGGLLVIKGNAASRCGI
EEECCCCCEEEEECCCCCCHHHHHCCCEEEEECCCHHHCCCCCCCCEEEEECCCCCCCCC
SMKGIDIVVHGNIGHMSAFMGQSGHLVVLGDAGDALGDSLYEAKLFVRGTVKSLGADCIE
EECCEEEEEECCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHEEEEEEECHHHHCHHHHH
KEMRPEHLQKLAELLEKAGVKDVRPEEFKRYGSARKLYNFNIDNADAY
HCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
PVIDLATTPLRELNSALHNIQKGSNDLSYEVANPRGSHAVAVGVSGPVLVDVNGSVGYY
CEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEECCCCEEEEECCCCEEE
CAGMNDGGTITVHGSAGPGVAENMMSGKVVIEGDASQYAGATGRGGLLVIKGNAASRCGI
EEECCCCCEEEEECCCCCCHHHHHCCCEEEEECCCHHHCCCCCCCCEEEEECCCCCCCCC
SMKGIDIVVHGNIGHMSAFMGQSGHLVVLGDAGDALGDSLYEAKLFVRGTVKSLGADCIE
EECCEEEEEECCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHEEEEEEECHHHHCHHHHH
KEMRPEHLQKLAELLEKAGVKDVRPEEFKRYGSARKLYNFNIDNADAY
HCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]