BacMap

Definition	Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession	NC_009636
Length	3,781,904

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The map label for this gene is gabD [H]

Identifier: 150398414

GI number: 150398414

Start: 3396441

End: 3397895

Strand: Direct

Name: gabD [H]

Synonym: Smed_3222

Alternate gene names: 150398414

Gene position: 3396441-3397895 (Clockwise)

Preceding gene: 150398412

Following gene: 150398415

Centisome position: 89.81

GC content: 63.02

Gene sequence:

>1455_bases
ATGAATTTGAAAGACCCGTCGCTGTTTCGCCAGGCCGCTCTTGTGGGCGAAACCTGGATCGAAGCCGATCCGAAAAACGC
GATCGAGGTGAACAACCCTGCGACCGGTGAAATCATCGGCCATGTTCCGAAGCTCGGCGCCGCCGAGACGAAGGCCGCGA
TCGAGACTGCGGCACGGGTACAGAAGGAATGGGCCGCGAGGACCGCCAAGGAGCGTTCGGCGGTGCTGCGCCGTTGGTTC
GAGCTGATGATCGAGAACAAGGACGATCTCGGCCGAATATTGACGAGCGAGCAGGGCAAGCCGCTTGCGGAGGCGACCGG
AGAGATCGTTTACGGCGCCAGCTTCATCGAGTGGTTTGCGGAAGAAGCGCGTCGCATCTATGGCGATCTCGTTCCAGGCC
ATCAGAAAGACAAGCGCATTCTGGTGATGAAGCAGCCGATCGGCGTCGTTGCGGCGATCACGCCCTGGAACTTCCCGAAC
GCAATGATCACCCGCAAGGCCGGCCCCGCCTTTGCCGCCGGCTGCGCCATGGTCCTGAAACCGGCTGCACAGACGCCGTT
CTCGGCCATTGCCATTGCCGTGCTCGCCGAGCGCGCGGGCATGCCGAAAGGGCTCTTCAGTGTCATCACCGGCTCGGCGC
GGGAGATCGGCGCCGAGATGACGTCGAACCCGACCGTCCGCAAACTGACCTTTACCGGCTCTACCGAAGTCGGCGCGGAG
CTGTATCGCCAGAGCGCCGCCACGATCAAGAAGCTTGGACTGGAACTCGGCGGCAACGCCCCCTTCATCGTCTTCGATGA
CGCCGATCTCGATGCGGCGGTAGAAGGCGCTCTCATCGCCAAGTTCCGCAACAACGGGCAGACCTGCGTCTGCGCAAATC
GCATCTATGTGCAGGAGGGCGTCTACGACGCCTTTTCCAGGAAGCTTGCCGCGGCCGTCGGCAAACTCACGACCGGCAAC
GGTATGGAAGACGGCGTCATCCTCGGTCCGCTGATCGACCAGCCGGCACTTGCCAAGGTCGAGGAGCATGTGGCCGACGC
GCTGGCGAAAGGCGCGCGCGTGATCGAGGGCGGCCGGCGCCATGCGCTCGGCGGTACCTTCTACGAGGCGACGGTCCTTG
CGGACGTCACCCAGGAGATGGCGGTCGCACGCGAGGAAACCTTCGGTCCGGTGGCGCCGCTCTTTCGTTTCAGGGACGAG
TCGGACGTCATCCAACAGGCCAACGACACGGAATTCGGTCTTGCCTCCTATTTCTACGCCAAGGATCTCGCCCGCGTCTT
CCGGGTCGCGGAAGCGCTGGAATACGGCATGGTCGGCGTCAATACCGGTCTTATCTCGACTGCGGAAGCACCCTTTGGCG
GCGTCAAACTCTCGGGGCTTGGCCGCGAGGGCTCGCGTTACGGCCTCGAGGAGTTCACCGAGATCAAATATGTCTGCCTC
GGCGGTATCGCCTGA

Upstream 100 bases:

>100_bases
AGCATAAGCGGAAAGGACCGGTAAACGGCATATACATAATTGTCGAACCGGCAAAAAAAGTTGTATAACTTCTGTAGATT
TTTTTGAGGAAGGACGCGCC

Downstream 100 bases:

>100_bases
GGTTGCCTGCCCATCAAAGCCAAGCCGGCCGGAAAGTTCTGGCCGGCTTTTTCTTTTGTCGGTAAGAGGTTACGAACTCA
CGTTTTTGCCGGCGGATTAC

Product: succinic semialdehyde dehydrogenase

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MNLKDPSLFRQAALVGETWIEADPKNAIEVNNPATGEIIGHVPKLGAAETKAAIETAARVQKEWAARTAKERSAVLRRWF
ELMIENKDDLGRILTSEQGKPLAEATGEIVYGASFIEWFAEEARRIYGDLVPGHQKDKRILVMKQPIGVVAAITPWNFPN
AMITRKAGPAFAAGCAMVLKPAAQTPFSAIAIAVLAERAGMPKGLFSVITGSAREIGAEMTSNPTVRKLTFTGSTEVGAE
LYRQSAATIKKLGLELGGNAPFIVFDDADLDAAVEGALIAKFRNNGQTCVCANRIYVQEGVYDAFSRKLAAAVGKLTTGN
GMEDGVILGPLIDQPALAKVEEHVADALAKGARVIEGGRRHALGGTFYEATVLADVTQEMAVAREETFGPVAPLFRFRDE
SDVIQQANDTEFGLASYFYAKDLARVFRVAEALEYGMVGVNTGLISTAEAPFGGVKLSGLGREGSRYGLEEFTEIKYVCL
GGIA

Sequences:

>Translated_484_residues
MNLKDPSLFRQAALVGETWIEADPKNAIEVNNPATGEIIGHVPKLGAAETKAAIETAARVQKEWAARTAKERSAVLRRWF
ELMIENKDDLGRILTSEQGKPLAEATGEIVYGASFIEWFAEEARRIYGDLVPGHQKDKRILVMKQPIGVVAAITPWNFPN
AMITRKAGPAFAAGCAMVLKPAAQTPFSAIAIAVLAERAGMPKGLFSVITGSAREIGAEMTSNPTVRKLTFTGSTEVGAE
LYRQSAATIKKLGLELGGNAPFIVFDDADLDAAVEGALIAKFRNNGQTCVCANRIYVQEGVYDAFSRKLAAAVGKLTTGN
GMEDGVILGPLIDQPALAKVEEHVADALAKGARVIEGGRRHALGGTFYEATVLADVTQEMAVAREETFGPVAPLFRFRDE
SDVIQQANDTEFGLASYFYAKDLARVFRVAEALEYGMVGVNTGLISTAEAPFGGVKLSGLGREGSRYGLEEFTEIKYVCL
GGIA
>Mature_484_residues
MNLKDPSLFRQAALVGETWIEADPKNAIEVNNPATGEIIGHVPKLGAAETKAAIETAARVQKEWAARTAKERSAVLRRWF
ELMIENKDDLGRILTSEQGKPLAEATGEIVYGASFIEWFAEEARRIYGDLVPGHQKDKRILVMKQPIGVVAAITPWNFPN
AMITRKAGPAFAAGCAMVLKPAAQTPFSAIAIAVLAERAGMPKGLFSVITGSAREIGAEMTSNPTVRKLTFTGSTEVGAE
LYRQSAATIKKLGLELGGNAPFIVFDDADLDAAVEGALIAKFRNNGQTCVCANRIYVQEGVYDAFSRKLAAAVGKLTTGN
GMEDGVILGPLIDQPALAKVEEHVADALAKGARVIEGGRRHALGGTFYEATVLADVTQEMAVAREETFGPVAPLFRFRDE
SDVIQQANDTEFGLASYFYAKDLARVFRVAEALEYGMVGVNTGLISTAEAPFGGVKLSGLGREGSRYGLEEFTEIKYVCL
GGIA

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=481, Percent_Identity=54.2619542619543, Blast_Score=523, Evalue=1e-148,
Organism=Homo sapiens, GI25777721, Length=494, Percent_Identity=52.6315789473684, Blast_Score=512, Evalue=1e-145,
Organism=Homo sapiens, GI153266822, Length=475, Percent_Identity=36.4210526315789, Blast_Score=292, Evalue=6e-79,
Organism=Homo sapiens, GI25777730, Length=484, Percent_Identity=34.9173553719008, Blast_Score=287, Evalue=1e-77,
Organism=Homo sapiens, GI12007648, Length=459, Percent_Identity=34.4226579520697, Blast_Score=286, Evalue=3e-77,
Organism=Homo sapiens, GI21361176, Length=482, Percent_Identity=34.8547717842324, Blast_Score=284, Evalue=2e-76,
Organism=Homo sapiens, GI25777724, Length=474, Percent_Identity=34.8101265822785, Blast_Score=283, Evalue=2e-76,
Organism=Homo sapiens, GI115387104, Length=467, Percent_Identity=33.8329764453961, Blast_Score=281, Evalue=1e-75,
Organism=Homo sapiens, GI238814322, Length=478, Percent_Identity=34.7280334728033, Blast_Score=279, Evalue=5e-75,
Organism=Homo sapiens, GI25777732, Length=482, Percent_Identity=33.195020746888, Blast_Score=278, Evalue=1e-74,
Organism=Homo sapiens, GI21614513, Length=475, Percent_Identity=34.5263157894737, Blast_Score=277, Evalue=1e-74,
Organism=Homo sapiens, GI25777728, Length=415, Percent_Identity=36.144578313253, Blast_Score=267, Evalue=2e-71,
Organism=Homo sapiens, GI25777726, Length=474, Percent_Identity=31.4345991561181, Blast_Score=239, Evalue=4e-63,
Organism=Homo sapiens, GI25952152, Length=452, Percent_Identity=31.4159292035398, Blast_Score=225, Evalue=6e-59,
Organism=Homo sapiens, GI310128093, Length=450, Percent_Identity=30.4444444444444, Blast_Score=203, Evalue=4e-52,
Organism=Homo sapiens, GI188035924, Length=450, Percent_Identity=30.2222222222222, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI310128103, Length=450, Percent_Identity=30.2222222222222, Blast_Score=202, Evalue=7e-52,
Organism=Homo sapiens, GI301500698, Length=279, Percent_Identity=37.2759856630824, Blast_Score=195, Evalue=7e-50,
Organism=Homo sapiens, GI11095441, Length=473, Percent_Identity=27.2727272727273, Blast_Score=189, Evalue=4e-48,
Organism=Homo sapiens, GI310128091, Length=389, Percent_Identity=30.8483290488432, Blast_Score=182, Evalue=6e-46,
Organism=Homo sapiens, GI310128089, Length=331, Percent_Identity=31.4199395770393, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI223972651, Length=474, Percent_Identity=26.7932489451477, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI310128097, Length=250, Percent_Identity=34, Blast_Score=139, Evalue=4e-33,
Organism=Homo sapiens, GI206597441, Length=379, Percent_Identity=28.4960422163588, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI206597439, Length=379, Percent_Identity=28.4960422163588, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI22907049, Length=379, Percent_Identity=28.4960422163588, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI310128095, Length=301, Percent_Identity=30.8970099667774, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI73695881, Length=350, Percent_Identity=28.8571428571429, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI73695879, Length=350, Percent_Identity=28.8571428571429, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI4502043, Length=442, Percent_Identity=27.1493212669683, Blast_Score=121, Evalue=2e-27,
Organism=Homo sapiens, GI238814371, Length=442, Percent_Identity=27.1493212669683, Blast_Score=121, Evalue=2e-27,
Organism=Homo sapiens, GI71773324, Length=344, Percent_Identity=28.1976744186047, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI4557303, Length=335, Percent_Identity=25.6716417910448, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI73466520, Length=335, Percent_Identity=25.6716417910448, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI310128087, Length=267, Percent_Identity=30.7116104868914, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI238859541, Length=431, Percent_Identity=25.0580046403712, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI25777736, Length=431, Percent_Identity=25.0580046403712, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI25777734, Length=431, Percent_Identity=25.0580046403712, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI223972653, Length=474, Percent_Identity=22.9957805907173, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI310128099, Length=213, Percent_Identity=28.6384976525822, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI310128101, Length=213, Percent_Identity=28.6384976525822, Blast_Score=83, Evalue=5e-16,
Organism=Escherichia coli, GI1789015, Length=481, Percent_Identity=67.7754677754678, Blast_Score=698, Evalue=0.0,
Organism=Escherichia coli, GI1787684, Length=454, Percent_Identity=37.6651982378855, Blast_Score=321, Evalue=8e-89,
Organism=Escherichia coli, GI1787715, Length=451, Percent_Identity=37.9157427937916, Blast_Score=301, Evalue=4e-83,
Organism=Escherichia coli, GI1786504, Length=468, Percent_Identity=36.3247863247863, Blast_Score=283, Evalue=1e-77,
Organism=Escherichia coli, GI87081896, Length=467, Percent_Identity=35.3319057815846, Blast_Score=281, Evalue=5e-77,
Organism=Escherichia coli, GI87081926, Length=453, Percent_Identity=35.0993377483444, Blast_Score=265, Evalue=4e-72,
Organism=Escherichia coli, GI1787558, Length=458, Percent_Identity=32.3144104803493, Blast_Score=256, Evalue=3e-69,
Organism=Escherichia coli, GI87082295, Length=487, Percent_Identity=30.5954825462012, Blast_Score=228, Evalue=5e-61,
Organism=Escherichia coli, GI1788042, Length=440, Percent_Identity=31.3636363636364, Blast_Score=189, Evalue=4e-49,
Organism=Escherichia coli, GI1787250, Length=450, Percent_Identity=30.4444444444444, Blast_Score=176, Evalue=3e-45,
Organism=Escherichia coli, GI1787653, Length=458, Percent_Identity=25.5458515283843, Blast_Score=87, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17534119, Length=466, Percent_Identity=47.8540772532189, Blast_Score=425, Evalue=1e-119,
Organism=Caenorhabditis elegans, GI133930964, Length=459, Percent_Identity=37.2549019607843, Blast_Score=290, Evalue=1e-78,
Organism=Caenorhabditis elegans, GI25144435, Length=472, Percent_Identity=33.8983050847458, Blast_Score=282, Evalue=4e-76,
Organism=Caenorhabditis elegans, GI17562198, Length=483, Percent_Identity=34.1614906832298, Blast_Score=280, Evalue=1e-75,
Organism=Caenorhabditis elegans, GI25143876, Length=473, Percent_Identity=34.0380549682875, Blast_Score=268, Evalue=5e-72,
Organism=Caenorhabditis elegans, GI25143874, Length=464, Percent_Identity=34.4827586206897, Blast_Score=268, Evalue=6e-72,
Organism=Caenorhabditis elegans, GI32564736, Length=414, Percent_Identity=35.7487922705314, Blast_Score=264, Evalue=7e-71,
Organism=Caenorhabditis elegans, GI71995606, Length=459, Percent_Identity=33.7690631808279, Blast_Score=245, Evalue=4e-65,
Organism=Caenorhabditis elegans, GI71995613, Length=401, Percent_Identity=32.6683291770574, Blast_Score=211, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17551164, Length=457, Percent_Identity=29.3216630196937, Blast_Score=207, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI115534176, Length=443, Percent_Identity=29.5711060948081, Blast_Score=193, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI71986308, Length=467, Percent_Identity=27.4089935760171, Blast_Score=171, Evalue=6e-43,
Organism=Caenorhabditis elegans, GI32566756, Length=347, Percent_Identity=30.2593659942363, Blast_Score=134, Evalue=8e-32,
Organism=Caenorhabditis elegans, GI25146394, Length=347, Percent_Identity=30.2593659942363, Blast_Score=134, Evalue=9e-32,
Organism=Caenorhabditis elegans, GI25146391, Length=347, Percent_Identity=30.2593659942363, Blast_Score=134, Evalue=9e-32,
Organism=Caenorhabditis elegans, GI17564084, Length=339, Percent_Identity=28.9085545722714, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17534447, Length=474, Percent_Identity=26.7932489451477, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI115532534, Length=340, Percent_Identity=29.1176470588235, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI32564151, Length=428, Percent_Identity=25.9345794392523, Blast_Score=116, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI71990744, Length=313, Percent_Identity=25.2396166134185, Blast_Score=75, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6319478, Length=484, Percent_Identity=48.7603305785124, Blast_Score=481, Evalue=1e-136,
Organism=Saccharomyces cerevisiae, GI6320917, Length=461, Percent_Identity=34.2733188720174, Blast_Score=285, Evalue=2e-77,
Organism=Saccharomyces cerevisiae, GI6324950, Length=467, Percent_Identity=32.5481798715203, Blast_Score=278, Evalue=2e-75,
Organism=Saccharomyces cerevisiae, GI6325196, Length=469, Percent_Identity=32.409381663113, Blast_Score=261, Evalue=2e-70,
Organism=Saccharomyces cerevisiae, GI6323821, Length=462, Percent_Identity=32.034632034632, Blast_Score=243, Evalue=6e-65,
Organism=Saccharomyces cerevisiae, GI6323822, Length=467, Percent_Identity=31.6916488222698, Blast_Score=238, Evalue=1e-63,
Organism=Saccharomyces cerevisiae, GI6321828, Length=493, Percent_Identity=27.789046653144, Blast_Score=196, Evalue=7e-51,
Organism=Saccharomyces cerevisiae, GI6321826, Length=494, Percent_Identity=22.8744939271255, Blast_Score=94, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6323757, Length=326, Percent_Identity=23.3128834355828, Blast_Score=94, Evalue=7e-20,
Organism=Drosophila melanogaster, GI281362580, Length=482, Percent_Identity=51.2448132780083, Blast_Score=500, Evalue=1e-141,
Organism=Drosophila melanogaster, GI62472918, Length=482, Percent_Identity=51.2448132780083, Blast_Score=500, Evalue=1e-141,
Organism=Drosophila melanogaster, GI62472926, Length=482, Percent_Identity=51.2448132780083, Blast_Score=500, Evalue=1e-141,
Organism=Drosophila melanogaster, GI62472936, Length=482, Percent_Identity=51.2448132780083, Blast_Score=500, Evalue=1e-141,
Organism=Drosophila melanogaster, GI21356737, Length=482, Percent_Identity=51.2448132780083, Blast_Score=500, Evalue=1e-141,
Organism=Drosophila melanogaster, GI24650465, Length=456, Percent_Identity=37.0614035087719, Blast_Score=304, Evalue=7e-83,
Organism=Drosophila melanogaster, GI20129399, Length=481, Percent_Identity=34.9272349272349, Blast_Score=289, Evalue=3e-78,
Organism=Drosophila melanogaster, GI24585660, Length=470, Percent_Identity=32.5531914893617, Blast_Score=263, Evalue=2e-70,
Organism=Drosophila melanogaster, GI24666674, Length=456, Percent_Identity=27.8508771929825, Blast_Score=177, Evalue=1e-44,
Organism=Drosophila melanogaster, GI24638878, Length=469, Percent_Identity=26.865671641791, Blast_Score=169, Evalue=4e-42,
Organism=Drosophila melanogaster, GI24638876, Length=469, Percent_Identity=26.865671641791, Blast_Score=169, Evalue=4e-42,
Organism=Drosophila melanogaster, GI281360299, Length=344, Percent_Identity=29.9418604651163, Blast_Score=129, Evalue=6e-30,
Organism=Drosophila melanogaster, GI281360297, Length=344, Percent_Identity=29.9418604651163, Blast_Score=129, Evalue=6e-30,
Organism=Drosophila melanogaster, GI281360295, Length=344, Percent_Identity=29.9418604651163, Blast_Score=129, Evalue=6e-30,
Organism=Drosophila melanogaster, GI24586250, Length=344, Percent_Identity=29.9418604651163, Blast_Score=129, Evalue=6e-30,
Organism=Drosophila melanogaster, GI281360301, Length=344, Percent_Identity=29.9418604651163, Blast_Score=128, Evalue=7e-30,
Organism=Drosophila melanogaster, GI45552499, Length=344, Percent_Identity=29.6511627906977, Blast_Score=128, Evalue=9e-30,
Organism=Drosophila melanogaster, GI281360303, Length=344, Percent_Identity=29.6511627906977, Blast_Score=128, Evalue=9e-30,
Organism=Drosophila melanogaster, GI24668425, Length=431, Percent_Identity=23.8979118329466, Blast_Score=105, Evalue=9e-23,
Organism=Drosophila melanogaster, GI24668417, Length=431, Percent_Identity=23.8979118329466, Blast_Score=105, Evalue=9e-23,
Organism=Drosophila melanogaster, GI24668413, Length=431, Percent_Identity=23.8979118329466, Blast_Score=105, Evalue=9e-23,
Organism=Drosophila melanogaster, GI28574525, Length=464, Percent_Identity=21.551724137931, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28571798, Length=343, Percent_Identity=21.865889212828, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI28571796, Length=343, Percent_Identity=21.865889212828, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI28571794, Length=343, Percent_Identity=21.865889212828, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI28571806, Length=343, Percent_Identity=21.865889212828, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI28571802, Length=343, Percent_Identity=21.865889212828, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI28571800, Length=343, Percent_Identity=21.865889212828, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI281360293, Length=162, Percent_Identity=29.6296296296296, Blast_Score=69, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 51864; Mature: 51864

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKDPSLFRQAALVGETWIEADPKNAIEVNNPATGEIIGHVPKLGAAETKAAIETAARV
CCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHH
QKEWAARTAKERSAVLRRWFELMIENKDDLGRILTSEQGKPLAEATGEIVYGASFIEWFA
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHCCCEEECHHHHHHHH
EEARRIYGDLVPGHQKDKRILVMKQPIGVVAAITPWNFPNAMITRKAGPAFAAGCAMVLK
HHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCEECCCCCHHHHHHHHHHC
PAAQTPFSAIAIAVLAERAGMPKGLFSVITGSAREIGAEMTSNPTVRKLTFTGSTEVGAE
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHCCHHCCCCCEEEEEECCCHHHHHH
LYRQSAATIKKLGLELGGNAPFIVFDDADLDAAVEGALIAKFRNNGQTCVCANRIYVQEG
HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHEEEECCCCCEEEEECEEEEHHH
VYDAFSRKLAAAVGKLTTGNGMEDGVILGPLIDQPALAKVEEHVADALAKGARVIEGGRR
HHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCC
HALGGTFYEATVLADVTQEMAVAREETFGPVAPLFRFRDESDVIQQANDTEFGLASYFYA
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHCCCCCCHHHHHHHHH
KDLARVFRVAEALEYGMVGVNTGLISTAEAPFGGVKLSGLGREGSRYGLEEFTEIKYVCL
HHHHHHHHHHHHHHHCCEEECCCCEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHEE
GGIA
CCCC
>Mature Secondary Structure
MNLKDPSLFRQAALVGETWIEADPKNAIEVNNPATGEIIGHVPKLGAAETKAAIETAARV
CCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHH
QKEWAARTAKERSAVLRRWFELMIENKDDLGRILTSEQGKPLAEATGEIVYGASFIEWFA
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHCCCEEECHHHHHHHH
EEARRIYGDLVPGHQKDKRILVMKQPIGVVAAITPWNFPNAMITRKAGPAFAAGCAMVLK
HHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCEECCCCCHHHHHHHHHHC
PAAQTPFSAIAIAVLAERAGMPKGLFSVITGSAREIGAEMTSNPTVRKLTFTGSTEVGAE
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHCCHHCCCCCEEEEEECCCHHHHHH
LYRQSAATIKKLGLELGGNAPFIVFDDADLDAAVEGALIAKFRNNGQTCVCANRIYVQEG
HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHEEEECCCCCEEEEECEEEEHHH
VYDAFSRKLAAAVGKLTTGNGMEDGVILGPLIDQPALAKVEEHVADALAKGARVIEGGRR
HHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCC
HALGGTFYEATVLADVTQEMAVAREETFGPVAPLFRFRDESDVIQQANDTEFGLASYFYA
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHCCCCCCHHHHHHHHH
KDLARVFRVAEALEYGMVGVNTGLISTAEAPFGGVKLSGLGREGSRYGLEEFTEIKYVCL
HHHHHHHHHHHHHHHCCEEECCCCEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHEE
GGIA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8297211; 9205837; 9278503 [H]