Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
---|---|
Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is coaE [H]
Identifier: 150398404
GI number: 150398404
Start: 3387340
End: 3387924
Strand: Direct
Name: coaE [H]
Synonym: Smed_3212
Alternate gene names: 150398404
Gene position: 3387340-3387924 (Clockwise)
Preceding gene: 150398403
Following gene: 150398405
Centisome position: 89.57
GC content: 61.2
Gene sequence:
>585_bases ATGATCATCGTCGGCCTTACCGGTTCCATCGGGATGGGGAAATCGACCGCAGCAGGGATGTTCCGGGAACTGGGCGTGCC GGTCAACGATGCCGACGAAGTGGTGCACCAGCTATATCGCGGGGAAGCGGTGGAGCCGATCGAAGCCGCCTTTCCGGGCG TCGCGAAGGACGGCACCATCGACCGGTCGGAGCTTTCGCAGCGGCTTGTCGCGGCTCCCGAGCGCCTTGCCGAATTGGAG CAAATCGTCCATCCCTTGGTGCGTGCCAGAGAGCAGGAATTCCTCGCGCGTTGCAAGGCAGCCGGCTCTCCTTTCGTGGT TCTCGACATTCCGCTGCTCTTCGAGACCAAGGCCGAGACACGCGTCGACCGCGTCATAGTCGTGACCTGCGATCCCGAGA TGCAGAAAGAACGCGTCTTGAAACGCCCGGGAATGACGGCCGAAAAATTCGCGATGATTCTCAAGCGGCAGGTGCCGGAC AGCGAGAAACGCAGCCGTGCGGACTATGTCGTCGATACCAGCGACAGCTTCGATGTCACACGGCAGCAGATCCGCGCGAT CGTCGACGATTTGAGGGCGAATTAG
Upstream 100 bases:
>100_bases TCCACCAGGCGGCGCCCGGATTCGAAAAATGGTTCGGCCTCAGGCCGGTCGTCGACGAAGCGCTCAGAGAGATCATCATC AGCGATATGGACAAGCACGC
Downstream 100 bases:
>100_bases CCGTTCGCCGCGGAAAGGTGCTCGTATCAACGGTGCAAAGCCTTCGCCGCAACTTCAATTGACGGTCGAATGACACTAAG AATGGAAAACAGCTTCGGGT
Product: dephospho-CoA kinase
Products: NA
Alternate protein names: Dephosphocoenzyme A kinase [H]
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MIIVGLTGSIGMGKSTAAGMFRELGVPVNDADEVVHQLYRGEAVEPIEAAFPGVAKDGTIDRSELSQRLVAAPERLAELE QIVHPLVRAREQEFLARCKAAGSPFVVLDIPLLFETKAETRVDRVIVVTCDPEMQKERVLKRPGMTAEKFAMILKRQVPD SEKRSRADYVVDTSDSFDVTRQQIRAIVDDLRAN
Sequences:
>Translated_194_residues MIIVGLTGSIGMGKSTAAGMFRELGVPVNDADEVVHQLYRGEAVEPIEAAFPGVAKDGTIDRSELSQRLVAAPERLAELE QIVHPLVRAREQEFLARCKAAGSPFVVLDIPLLFETKAETRVDRVIVVTCDPEMQKERVLKRPGMTAEKFAMILKRQVPD SEKRSRADYVVDTSDSFDVTRQQIRAIVDDLRAN >Mature_194_residues MIIVGLTGSIGMGKSTAAGMFRELGVPVNDADEVVHQLYRGEAVEPIEAAFPGVAKDGTIDRSELSQRLVAAPERLAELE QIVHPLVRAREQEFLARCKAAGSPFVVLDIPLLFETKAETRVDRVIVVTCDPEMQKERVLKRPGMTAEKFAMILKRQVPD SEKRSRADYVVDTSDSFDVTRQQIRAIVDDLRAN
Specific function: Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A [H]
COG id: COG0237
COG function: function code H; Dephospho-CoA kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DPCK (dephospho-CoA kinase) domain [H]
Homologues:
Organism=Homo sapiens, GI191252797, Length=197, Percent_Identity=29.4416243654822, Blast_Score=91, Evalue=7e-19, Organism=Homo sapiens, GI191252795, Length=197, Percent_Identity=29.4416243654822, Blast_Score=91, Evalue=7e-19, Organism=Homo sapiens, GI110227607, Length=188, Percent_Identity=27.1276595744681, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI110227605, Length=188, Percent_Identity=27.1276595744681, Blast_Score=68, Evalue=5e-12, Organism=Homo sapiens, GI110227603, Length=188, Percent_Identity=27.1276595744681, Blast_Score=68, Evalue=5e-12, Organism=Homo sapiens, GI110227601, Length=188, Percent_Identity=27.1276595744681, Blast_Score=68, Evalue=5e-12, Organism=Homo sapiens, GI205277394, Length=188, Percent_Identity=27.1276595744681, Blast_Score=67, Evalue=8e-12, Organism=Escherichia coli, GI1786292, Length=180, Percent_Identity=36.1111111111111, Blast_Score=100, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17554944, Length=202, Percent_Identity=29.2079207920792, Blast_Score=102, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6320402, Length=206, Percent_Identity=28.6407766990291, Blast_Score=91, Evalue=8e-20, Organism=Drosophila melanogaster, GI24644728, Length=204, Percent_Identity=28.4313725490196, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI24658602, Length=192, Percent_Identity=28.6458333333333, Blast_Score=67, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001977 [H]
Pfam domain/function: PF01121 CoaE [H]
EC number: =2.7.1.24 [H]
Molecular weight: Translated: 21504; Mature: 21504
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIVGLTGSIGMGKSTAAGMFRELGVPVNDADEVVHQLYRGEAVEPIEAAFPGVAKDGTI CEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCC DRSELSQRLVAAPERLAELEQIVHPLVRAREQEFLARCKAAGSPFVVLDIPLLFETKAET CHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCHHH RVDRVIVVTCDPEMQKERVLKRPGMTAEKFAMILKRQVPDSEKRSRADYVVDTSDSFDVT CCCEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHCCCCEEEECCCCHHHH RQQIRAIVDDLRAN HHHHHHHHHHHCCC >Mature Secondary Structure MIIVGLTGSIGMGKSTAAGMFRELGVPVNDADEVVHQLYRGEAVEPIEAAFPGVAKDGTI CEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCC DRSELSQRLVAAPERLAELEQIVHPLVRAREQEFLARCKAAGSPFVVLDIPLLFETKAET CHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCHHH RVDRVIVVTCDPEMQKERVLKRPGMTAEKFAMILKRQVPDSEKRSRADYVVDTSDSFDVT CCCEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHCCCCEEEECCCCHHHH RQQIRAIVDDLRAN HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]