Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
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Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is 150396059
Identifier: 150396059
GI number: 150396059
Start: 895658
End: 896281
Strand: Direct
Name: 150396059
Synonym: Smed_0835
Alternate gene names: NA
Gene position: 895658-896281 (Clockwise)
Preceding gene: 150396058
Following gene: 150396060
Centisome position: 23.68
GC content: 52.24
Gene sequence:
>624_bases ATGTGGCGAGTTGGAAGTTTGCTAGGCGGCGTTGCCTGCATGATCGCGGCTGGATGGATTGGTTATTCGTATCGAGCCGG TGACACTTTGTTTGAGCCCATCCTAGCATTCCTTGGCCTATTCGGCGCTTGGGCATTCGCCGAAACCAAAGCCGTTGCGC CTGAGCCGCGAACAGCCTTGCTCCACCCCCACGATGTAGTGCTTGGCCAGAAGGTCCGTGATTGCTTCACTGAGCGCAAC AAGAGATATCTCCGGGAAAACTCATTCGGAGCATCATTTCGTTATGCATCGTTAGACTTCGTCAGAGACTTTCTGGAACG GCAAGGCCCGGAACATGAGTTCGAGAATGCGTCACTAGACAATCTTGTTGCGGAGATTTCCCAAAAAGCCGCCGCACTGT GCGAGAGGATAGATCAGTATGGCAATCCTATTAGTCATCGTGATGAATGGTGGTCTCTCGCACCAGAACAAGAACGAATA TCGGATTGGCACAGCAAGGAAACATCACAGAAAATTGCGGAGGTAGATCGCCTCGCGGACGAGGTTGCGGAAGCTGCTGA CGCCTTTGAAAGAACATTCCGCAAACTCTCACCCGAAAGCTATCTTGGCGGCGCAAATGTGTGA
Upstream 100 bases:
>100_bases GGCCAAATAGCCACCCAGGTAACCCGCCCGCCGGAATAATGAGTTTCCGGCGGGTTTTCGGCGTCTGTCTACAGGTCTGA TATTTATTCGAGGGTGGCAA
Downstream 100 bases:
>100_bases AGGACGGATATGATATCAAAAGAACAACTCGGTCAAAAAGACACGAGTGACTGGCCGTCCATTACCGAAAACCAGTGGTA TGCACTCGCGATCACGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MWRVGSLLGGVACMIAAGWIGYSYRAGDTLFEPILAFLGLFGAWAFAETKAVAPEPRTALLHPHDVVLGQKVRDCFTERN KRYLRENSFGASFRYASLDFVRDFLERQGPEHEFENASLDNLVAEISQKAAALCERIDQYGNPISHRDEWWSLAPEQERI SDWHSKETSQKIAEVDRLADEVAEAADAFERTFRKLSPESYLGGANV
Sequences:
>Translated_207_residues MWRVGSLLGGVACMIAAGWIGYSYRAGDTLFEPILAFLGLFGAWAFAETKAVAPEPRTALLHPHDVVLGQKVRDCFTERN KRYLRENSFGASFRYASLDFVRDFLERQGPEHEFENASLDNLVAEISQKAAALCERIDQYGNPISHRDEWWSLAPEQERI SDWHSKETSQKIAEVDRLADEVAEAADAFERTFRKLSPESYLGGANV >Mature_207_residues MWRVGSLLGGVACMIAAGWIGYSYRAGDTLFEPILAFLGLFGAWAFAETKAVAPEPRTALLHPHDVVLGQKVRDCFTERN KRYLRENSFGASFRYASLDFVRDFLERQGPEHEFENASLDNLVAEISQKAAALCERIDQYGNPISHRDEWWSLAPEQERI SDWHSKETSQKIAEVDRLADEVAEAADAFERTFRKLSPESYLGGANV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23346; Mature: 23346
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWRVGSLLGGVACMIAAGWIGYSYRAGDTLFEPILAFLGLFGAWAFAETKAVAPEPRTAL CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LHPHDVVLGQKVRDCFTERNKRYLRENSFGASFRYASLDFVRDFLERQGPEHEFENASLD CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCHH NLVAEISQKAAALCERIDQYGNPISHRDEWWSLAPEQERISDWHSKETSQKIAEVDRLAD HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EVAEAADAFERTFRKLSPESYLGGANV HHHHHHHHHHHHHHHCCCHHCCCCCCC >Mature Secondary Structure MWRVGSLLGGVACMIAAGWIGYSYRAGDTLFEPILAFLGLFGAWAFAETKAVAPEPRTAL CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LHPHDVVLGQKVRDCFTERNKRYLRENSFGASFRYASLDFVRDFLERQGPEHEFENASLD CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCHH NLVAEISQKAAALCERIDQYGNPISHRDEWWSLAPEQERISDWHSKETSQKIAEVDRLAD HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EVAEAADAFERTFRKLSPESYLGGANV HHHHHHHHHHHHHHHCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA