Click here to switch to the map view.

The map label for this gene is 150396057

Identifier: 150396057

GI number: 150396057

Start: 894514

End: 894891

Strand: Direct

Name: 150396057

Synonym: Smed_0833

Alternate gene names: NA

Gene position: 894514-894891 (Clockwise)

Preceding gene: 150396055

Following gene: 150396058

Centisome position: 23.65

GC content: 60.58

Gene sequence:

>378_bases
ATGCTATCATCCTTCTTGCCTTTTAAGGCCGAGGCGTCGGGCGGGTTATCAACTGAATCGTTGCGCGGCTCGACTGACGC
CCTTTGCGAATCACACGCCGAAGGAGTGAGCCCCATGGACGATATCCGCGATATCGCTGCAATGATCGCCCGACTGGAAG
AGACCGGGATGACGCGCCGACAGATTGCCGAAGGATCGCATGTCGGCGCGAGCGCGATTACGCGGATCATGGCTGGCGAA
GCCCGCAACCCGTCGTTCCGGGTGATATCCTCAATCCGCAGTTTCTATCGGCAGCATTTTCCCAATGGCGATCCGACTCG
CCGGTACGATCTGGAGCAACGTTTTGCGCCGGGATGCCAGCCGCGCGCCGGCCGGTGA

Upstream 100 bases:

>100_bases
TTTTCCAAAAGGAAATCAGATACTTGACCCAAGCCGGCGATGAGCCGGCTAACGGATTTTTCCGCCTGACCCAAAAATTG
GGTCAGTTTTGGGTCAGGCG

Downstream 100 bases:

>100_bases
AGCAACAGGCTCTGCAAGCGAGCATTGTTGGGAGCAGTTGATTCGATTCCAGAGTCAATAACAAAGCCGCGCCAGTCTGG
TTTTCCACACCGCATGCACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MLSSFLPFKAEASGGLSTESLRGSTDALCESHAEGVSPMDDIRDIAAMIARLEETGMTRRQIAEGSHVGASAITRIMAGE
ARNPSFRVISSIRSFYRQHFPNGDPTRRYDLEQRFAPGCQPRAGR

Sequences:

>Translated_125_residues
MLSSFLPFKAEASGGLSTESLRGSTDALCESHAEGVSPMDDIRDIAAMIARLEETGMTRRQIAEGSHVGASAITRIMAGE
ARNPSFRVISSIRSFYRQHFPNGDPTRRYDLEQRFAPGCQPRAGR
>Mature_125_residues
MLSSFLPFKAEASGGLSTESLRGSTDALCESHAEGVSPMDDIRDIAAMIARLEETGMTRRQIAEGSHVGASAITRIMAGE
ARNPSFRVISSIRSFYRQHFPNGDPTRRYDLEQRFAPGCQPRAGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13689; Mature: 13689

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSSFLPFKAEASGGLSTESLRGSTDALCESHAEGVSPMDDIRDIAAMIARLEETGMTRR
CCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHH
QIAEGSHVGASAITRIMAGEARNPSFRVISSIRSFYRQHFPNGDPTRRYDLEQRFAPGCQ
HHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCC
PRAGR
CCCCC
>Mature Secondary Structure
MLSSFLPFKAEASGGLSTESLRGSTDALCESHAEGVSPMDDIRDIAAMIARLEETGMTRR
CCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHH
QIAEGSHVGASAITRIMAGEARNPSFRVISSIRSFYRQHFPNGDPTRRYDLEQRFAPGCQ
HHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCC
PRAGR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA