Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150395979

Identifier: 150395979

GI number: 150395979

Start: 811404

End: 812519

Strand: Direct

Name: 150395979

Synonym: Smed_0755

Alternate gene names: NA

Gene position: 811404-812519 (Clockwise)

Preceding gene: 150395978

Following gene: 150395980

Centisome position: 21.45

GC content: 60.13

Gene sequence:

>1116_bases
ATGAATGAAGCTTTTCAGAGAGACTGTATTGAAATTCTCGCAGACAAGGTCAAGCGCGGCGAGATGACCCGCCGGCGCTT
TGCCCAGCTCGCCGCGATGCTCGTCGCCGGGGCGCCGCTGGCGCTCCGGGCAGGCGGTGCCGCGGCGCAGGCCAAGCAGC
TTGTTTTCGTAAACTGGGGCGGAGATGCCATCACCGCCTATGACAAGGCTTACGGCCAGCCGTTTCTGGAGGAAGCCGGA
ATCACGGTCAGGCAAGACGGTTCGGGGCCGACCGAAGGTGCCATCACCGCCCAGTTCAAGAGTGGGGCTCCGAGCTGGGA
TATCGTCGATGCGGATCCCTTCTCGGCGATAACGCTGGGCAAGCAGGGGATGATCGAGGAAATCGACTACTCTGTTGTCG
ACAAGAATAAAATGCGTCCGGGTTTTGGCTGGGACTATGCCGCGTCGAGCTATTTCTTCTCCTACGTCATCGCCTACGAT
TCCGAAAAATACGGCGACAATCCTCCCAAAGGCATGGCCGACTTCTTCGATGTGAATGCCTTCCCCGGCAAGCGCTCCCT
CTACAAGTGGGGCAGCGCTATGTGGGAAGCGGCCCTTCTCGGTGACGGCGTCGCTCCCGAAAAGCTCTACCCGCTCGACC
TCAAACGCGCCCATGACAAGATCGCCGCATTCAAGGAAAACGTCGTCGCCTATTGGGGCGGCGGCTCTGAAAGCCAGTCG
CTCCTTCTCGACGGCGAGGCCTCAATGGCCCTCATCTGGTCGACCCGTGCCTCGCTGATCGAGCAGGACTCGGGTGGCCG
CATCAAATTCATCTGGGATCAGGGCCTGCTGTCTCCGGGGGCCATGGCCGTCATAAAGGGCAACCCCGGCGGCCGCGACG
CGGCGATGAAATTCATCGCAAGCGCTCAGGACCCGCAGAAGCAGCTTGTCATGTTCGACCTGCTTCGGCAGGGACCGGCA
AATCCTGCTGCCGACGCGCTTATCCCCGAGGAGCAGAAGCGCCAGAATCCGGTCGATCCTGCGAATATGAGCAAGCAGAT
ACCGCTTAACATGGAATGGTACGCAGAGCATTACGGGCCGGCGCTCAACGAATTCACCAAAATCGTTTCCGCCTGA

Upstream 100 bases:

>100_bases
GACATGGCCCGCCGGAAAAGGCTTTCTGTTGCCGGCCTCCGGCTGAAACACCACAGACCGGCAGACGCCTATTGTGCAGT
GATAAAAAAGGGGAACGACG

Downstream 100 bases:

>100_bases
GCCGCCGATGCTCGCGCGCTCCCACAATCTTGGCGCGGCGCTCCTTCTGGCGCCGCTTCTCCTGCTCCTTGCCGTGGCAT
ACGGCATCCCGTTTCTTGGC

Product: ABC transporter binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MNEAFQRDCIEILADKVKRGEMTRRRFAQLAAMLVAGAPLALRAGGAAAQAKQLVFVNWGGDAITAYDKAYGQPFLEEAG
ITVRQDGSGPTEGAITAQFKSGAPSWDIVDADPFSAITLGKQGMIEEIDYSVVDKNKMRPGFGWDYAASSYFFSYVIAYD
SEKYGDNPPKGMADFFDVNAFPGKRSLYKWGSAMWEAALLGDGVAPEKLYPLDLKRAHDKIAAFKENVVAYWGGGSESQS
LLLDGEASMALIWSTRASLIEQDSGGRIKFIWDQGLLSPGAMAVIKGNPGGRDAAMKFIASAQDPQKQLVMFDLLRQGPA
NPAADALIPEEQKRQNPVDPANMSKQIPLNMEWYAEHYGPALNEFTKIVSA

Sequences:

>Translated_371_residues
MNEAFQRDCIEILADKVKRGEMTRRRFAQLAAMLVAGAPLALRAGGAAAQAKQLVFVNWGGDAITAYDKAYGQPFLEEAG
ITVRQDGSGPTEGAITAQFKSGAPSWDIVDADPFSAITLGKQGMIEEIDYSVVDKNKMRPGFGWDYAASSYFFSYVIAYD
SEKYGDNPPKGMADFFDVNAFPGKRSLYKWGSAMWEAALLGDGVAPEKLYPLDLKRAHDKIAAFKENVVAYWGGGSESQS
LLLDGEASMALIWSTRASLIEQDSGGRIKFIWDQGLLSPGAMAVIKGNPGGRDAAMKFIASAQDPQKQLVMFDLLRQGPA
NPAADALIPEEQKRQNPVDPANMSKQIPLNMEWYAEHYGPALNEFTKIVSA
>Mature_371_residues
MNEAFQRDCIEILADKVKRGEMTRRRFAQLAAMLVAGAPLALRAGGAAAQAKQLVFVNWGGDAITAYDKAYGQPFLEEAG
ITVRQDGSGPTEGAITAQFKSGAPSWDIVDADPFSAITLGKQGMIEEIDYSVVDKNKMRPGFGWDYAASSYFFSYVIAYD
SEKYGDNPPKGMADFFDVNAFPGKRSLYKWGSAMWEAALLGDGVAPEKLYPLDLKRAHDKIAAFKENVVAYWGGGSESQS
LLLDGEASMALIWSTRASLIEQDSGGRIKFIWDQGLLSPGAMAVIKGNPGGRDAAMKFIASAQDPQKQLVMFDLLRQGPA
NPAADALIPEEQKRQNPVDPANMSKQIPLNMEWYAEHYGPALNEFTKIVSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40402; Mature: 40402

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEAFQRDCIEILADKVKRGEMTRRRFAQLAAMLVAGAPLALRAGGAAAQAKQLVFVNWG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHCCCEEEEEEEC
GDAITAYDKAYGQPFLEEAGITVRQDGSGPTEGAITAQFKSGAPSWDIVDADPFSAITLG
CCEEEHHHHHHCCCHHHHCCCEEEECCCCCCCCCEEEEECCCCCCCCEECCCCCCEEECC
KQGMIEEIDYSVVDKNKMRPGFGWDYAASSYFFSYVIAYDSEKYGDNPPKGMADFFDVNA
CCCCHHHHCHHHHCCCCCCCCCCCCHHHHHHEEEEEEEECCHHCCCCCCCCCHHHHCCCC
FPGKRSLYKWGSAMWEAALLGDGVAPEKLYPLDLKRAHDKIAAFKENVVAYWGGGSESQS
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCE
LLLDGEASMALIWSTRASLIEQDSGGRIKFIWDQGLLSPGAMAVIKGNPGGRDAAMKFIA
EEEECCCCEEEEEEHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHH
SAQDPQKQLVMFDLLRQGPANPAADALIPEEQKRQNPVDPANMSKQIPLNMEWYAEHYGP
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHCH
ALNEFTKIVSA
HHHHHHHHHCC
>Mature Secondary Structure
MNEAFQRDCIEILADKVKRGEMTRRRFAQLAAMLVAGAPLALRAGGAAAQAKQLVFVNWG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHCCCEEEEEEEC
GDAITAYDKAYGQPFLEEAGITVRQDGSGPTEGAITAQFKSGAPSWDIVDADPFSAITLG
CCEEEHHHHHHCCCHHHHCCCEEEECCCCCCCCCEEEEECCCCCCCCEECCCCCCEEECC
KQGMIEEIDYSVVDKNKMRPGFGWDYAASSYFFSYVIAYDSEKYGDNPPKGMADFFDVNA
CCCCHHHHCHHHHCCCCCCCCCCCCHHHHHHEEEEEEEECCHHCCCCCCCCCHHHHCCCC
FPGKRSLYKWGSAMWEAALLGDGVAPEKLYPLDLKRAHDKIAAFKENVVAYWGGGSESQS
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCE
LLLDGEASMALIWSTRASLIEQDSGGRIKFIWDQGLLSPGAMAVIKGNPGGRDAAMKFIA
EEEECCCCEEEEEEHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHH
SAQDPQKQLVMFDLLRQGPANPAADALIPEEQKRQNPVDPANMSKQIPLNMEWYAEHYGP
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHCH
ALNEFTKIVSA
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA