Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
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Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is 150395911
Identifier: 150395911
GI number: 150395911
Start: 740947
End: 741333
Strand: Direct
Name: 150395911
Synonym: Smed_0687
Alternate gene names: NA
Gene position: 740947-741333 (Clockwise)
Preceding gene: 150395910
Following gene: 150395915
Centisome position: 19.59
GC content: 60.47
Gene sequence:
>387_bases ATGCCGGTATACGGCGGAACAGGCAGCGGAAATCCTCTTCCGCCGGGACACCCCGGCGAAAGGAGGTGCGTAATGGTACG CAATGTGGTCCGCGGCCTTTCTCTTGCCGTCCTTCTGACGGCGGCGGTGACGACCTATCCCCATGCGGCAGACTCGCAGG GCGTTGTGAATTGCGCTGAGCGATCGCAAGTCATCGAGTTGCTTACTCGACAATATGAAGAAAAGCAGGCCGCCGTCGGG CAGATCAATCCGCAGGCGGTGATGGAACTCTATGCCGCCGATGGTGGCAGCTGGACCTTGATCGTGACGGACGTTTCCGG CCGAAGCTGCGTCGTTCTTGCTGGAAAAAGCTGGGAGCAGGTCGTCCAGGTCGGTCCGAAGGCCTGA
Upstream 100 bases:
>100_bases AGGTTACGCTCTGTAAATAGGCAACCGAGATATAGCCTGCCTCCGTCATGCTTTACAGATGGCGACATCGCTTCGTCGCT CGAAGGTGTCGACCATAGCA
Downstream 100 bases:
>100_bases CGGCCACCTGAGTGGCGCGCGCAGAGGGAAGCCCGTTCAGCTTCCCTCTGCCGCGAAGCACTTAATCAATTTGGAGCGGG AAAAGTGTGTGCGGTTTTCC
Product: putative signal peptide protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MPVYGGTGSGNPLPPGHPGERRCVMVRNVVRGLSLAVLLTAAVTTYPHAADSQGVVNCAERSQVIELLTRQYEEKQAAVG QINPQAVMELYAADGGSWTLIVTDVSGRSCVVLAGKSWEQVVQVGPKA
Sequences:
>Translated_128_residues MPVYGGTGSGNPLPPGHPGERRCVMVRNVVRGLSLAVLLTAAVTTYPHAADSQGVVNCAERSQVIELLTRQYEEKQAAVG QINPQAVMELYAADGGSWTLIVTDVSGRSCVVLAGKSWEQVVQVGPKA >Mature_127_residues PVYGGTGSGNPLPPGHPGERRCVMVRNVVRGLSLAVLLTAAVTTYPHAADSQGVVNCAERSQVIELLTRQYEEKQAAVGQ INPQAVMELYAADGGSWTLIVTDVSGRSCVVLAGKSWEQVVQVGPKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13488; Mature: 13356
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVYGGTGSGNPLPPGHPGERRCVMVRNVVRGLSLAVLLTAAVTTYPHAADSQGVVNCAE CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH RSQVIELLTRQYEEKQAAVGQINPQAVMELYAADGGSWTLIVTDVSGRSCVVLAGKSWEQ HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCHHH VVQVGPKA HHHCCCCC >Mature Secondary Structure PVYGGTGSGNPLPPGHPGERRCVMVRNVVRGLSLAVLLTAAVTTYPHAADSQGVVNCAE CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH RSQVIELLTRQYEEKQAAVGQINPQAVMELYAADGGSWTLIVTDVSGRSCVVLAGKSWEQ HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCHHH VVQVGPKA HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA