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The map label for this gene is ydeP [H]

Identifier: 150395877

GI number: 150395877

Start: 706062

End: 706463

Strand: Direct

Name: ydeP [H]

Synonym: Smed_0653

Alternate gene names: 150395877

Gene position: 706062-706463 (Clockwise)

Preceding gene: 150395875

Following gene: 150395878

Centisome position: 18.67

GC content: 61.44

Gene sequence:

>402_bases
ATGTCCCGTCCCCGCGCGAAACTGACGAACACATTTCCGGGCTGTCCAGTGGAGTCGGCCTTGAGCTTCATCGACGGCAA
ATGGAAGGGCGTCATTCTCTATCACCTGATGAGCGAAGGCATCCTGCGCTTCAACGAGCTGCGCAGAAGGCTGCCGAGCG
TGACGCCACGTATGCTGACCAGGCAGTTGCGTGAACTGGAGGAGGCGGCGCTGCTGTCGCGCACGGTCTTTCCGGTCGTT
CCGCCGCGTGTCGACTACGCTTTGACGGCAAGGGGAGAAAGCCTGAAACCGGTGATTATGGCCCTGAAAGCCTGGGGCGA
CGAGAATGTTCTCTGCGACGGAGACCGGATGACGCTGAAGCCGGCCGAATCCCGATCACGGCCGGAACGCAAACGGGCCT
GA

Upstream 100 bases:

>100_bases
GGAATTCTCCCTTCGAAATTGAACAGGAGCTACATGGGGCATATGCTGAAACAGCACAAGAATGCACAAATTTGGCCCAT
AGTGTCGAAAAGGATATCGT

Downstream 100 bases:

>100_bases
CGAAGCGGAGCGAATGGCAAAGTTACTGGTACTTTTCGTCGCCCGGCTCTGGAAACCCCCGCTGCCGCTCTTATCTGAGA
AGCTGAACGCACTCGCATGA

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MSRPRAKLTNTFPGCPVESALSFIDGKWKGVILYHLMSEGILRFNELRRRLPSVTPRMLTRQLRELEEAALLSRTVFPVV
PPRVDYALTARGESLKPVIMALKAWGDENVLCDGDRMTLKPAESRSRPERKRA

Sequences:

>Translated_133_residues
MSRPRAKLTNTFPGCPVESALSFIDGKWKGVILYHLMSEGILRFNELRRRLPSVTPRMLTRQLRELEEAALLSRTVFPVV
PPRVDYALTARGESLKPVIMALKAWGDENVLCDGDRMTLKPAESRSRPERKRA
>Mature_132_residues
SRPRAKLTNTFPGCPVESALSFIDGKWKGVILYHLMSEGILRFNELRRRLPSVTPRMLTRQLRELEEAALLSRTVFPVVP
PRVDYALTARGESLKPVIMALKAWGDENVLCDGDRMTLKPAESRSRPERKRA

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=96, Percent_Identity=37.5, Blast_Score=77, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 15133; Mature: 15002

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPRAKLTNTFPGCPVESALSFIDGKWKGVILYHLMSEGILRFNELRRRLPSVTPRMLT
CCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
RQLRELEEAALLSRTVFPVVPPRVDYALTARGESLKPVIMALKAWGDENVLCDGDRMTLK
HHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEECCCCEEEC
PAESRSRPERKRA
CCHHCCCCCCCCC
>Mature Secondary Structure 
SRPRAKLTNTFPGCPVESALSFIDGKWKGVILYHLMSEGILRFNELRRRLPSVTPRMLT
CCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
RQLRELEEAALLSRTVFPVVPPRVDYALTARGESLKPVIMALKAWGDENVLCDGDRMTLK
HHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEECCCCEEEC
PAESRSRPERKRA
CCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]