| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150395794
Identifier: 150395794
GI number: 150395794
Start: 619108
End: 620118
Strand: Direct
Name: 150395794
Synonym: Smed_0570
Alternate gene names: NA
Gene position: 619108-620118 (Clockwise)
Preceding gene: 150395792
Following gene: 150395795
Centisome position: 16.37
GC content: 64.59
Gene sequence:
>1011_bases ATGTCGAATCCCGTTCTGGTCGAAGTAACGCGCGGAAATCTGGTCGAAAGCCGCCATCGAGGCATGATCGTCGCCGTCGA TGCCGAGGGGAAGACACTGTTTTCGCTCGGTGAAGCGGATGCTCGCATCTTTCCGCGCTCGGCCTGCAAGGCAATGCAGG CCCTGCCGCTGATCGAAAGCGGTGCCGCCGACGCCTACGGGTTCGGGGACCGGGAACTGGCACTTGCCTGCTCCTCGCAT TCCGGGGAGTCGGAACATGTGGCGCTCGCCGCCTCGATGCTCGCGGCAGCGGGGCGGGACGTCCACGCGCTTGAATGCGG CGCCCATTGGTCCTCCGACCAGAAGACGCTGATCGCGCAGGCGCGCTCCCTCGAAGCCCCAAGCGCACTCCACAACAATT GCTCCGGCAAGCATGCGGGCTTTGTCTGTGCCTGCTGCCATTCCGGCACCGAGGTCAAAGATTATATCGGCTACGACCAC CCGCTTCAGAAGGAGATCCGCGGGGTCATGACGGAGCTGACGGGAGCTGTCCTCGGTCGCGACGACTGCGGCATCGATGG TTGCTCGATTCCGGCCTACGCGCTCTCGATGAGGGGTCTTGCCCGCGGCTTTGCAAAGATGGCGAGCGGAGTCGGCCTCG GGACGGAGCGGGCCCGGGCCTCGAAGCGTCTGATCGACGCCTGCATGGCCGAACCCTTTTATGTTGCCGGTTCCAGGCGT GCCTGCACACGCCTTATGAAGACGGCTCCCGGCCGAATCTTTGCGAAGACCGGCGCCGAAGGCGTCTTCTGTGCGGCGAT ACCCGAAAAGGGCGTCGGCATCGCGCTGAAATGCGAGGACGGCACGACCCGTGCCGCCGAGGCGATGGTCGCGGCAACGC TCGCTCGGTTCTTTACGGAAGATCGGGAGATCCATGCGGCGCTGATGGCGCAGGCCAATCACGCGATGCGCAACTGGAAC GGAATGCACGTCGGGGACGTACGGGTGGTGACGGAGGCCTTTGCCGCCTGA
Upstream 100 bases:
>100_bases GCGAGAAGGAGCTTGCGGATGAATTTCATCGACGGTGACTTTTCTGCCATGTGATTCCTGATAGATGCATATCCGAATCT TGGAAAATTGAGGGCAGGCG
Downstream 100 bases:
>100_bases TCCGCAATGGCTGGCCTTGTCAGTCGTAGCGATATCCTTTTCTCTGAGAGACACGCTTCAGCCGCACAATTTGGGAGGAA GAACGATGCTGAAACTGTTT
Product: L-asparaginase II
Products: NA
Alternate protein names: L-Asparaginase; Asparaginase; L-Asparaginase Rmolabile; L-Asparaginase II Protein; L-Asparaginase Rmolabile Subfamily; L-Asparaginase Rmolabile Family; Fumarate Lyase; Asparaginase-Related Protein
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSNPVLVEVTRGNLVESRHRGMIVAVDAEGKTLFSLGEADARIFPRSACKAMQALPLIESGAADAYGFGDRELALACSSH SGESEHVALAASMLAAAGRDVHALECGAHWSSDQKTLIAQARSLEAPSALHNNCSGKHAGFVCACCHSGTEVKDYIGYDH PLQKEIRGVMTELTGAVLGRDDCGIDGCSIPAYALSMRGLARGFAKMASGVGLGTERARASKRLIDACMAEPFYVAGSRR ACTRLMKTAPGRIFAKTGAEGVFCAAIPEKGVGIALKCEDGTTRAAEAMVAATLARFFTEDREIHAALMAQANHAMRNWN GMHVGDVRVVTEAFAA
Sequences:
>Translated_336_residues MSNPVLVEVTRGNLVESRHRGMIVAVDAEGKTLFSLGEADARIFPRSACKAMQALPLIESGAADAYGFGDRELALACSSH SGESEHVALAASMLAAAGRDVHALECGAHWSSDQKTLIAQARSLEAPSALHNNCSGKHAGFVCACCHSGTEVKDYIGYDH PLQKEIRGVMTELTGAVLGRDDCGIDGCSIPAYALSMRGLARGFAKMASGVGLGTERARASKRLIDACMAEPFYVAGSRR ACTRLMKTAPGRIFAKTGAEGVFCAAIPEKGVGIALKCEDGTTRAAEAMVAATLARFFTEDREIHAALMAQANHAMRNWN GMHVGDVRVVTEAFAA >Mature_335_residues SNPVLVEVTRGNLVESRHRGMIVAVDAEGKTLFSLGEADARIFPRSACKAMQALPLIESGAADAYGFGDRELALACSSHS GESEHVALAASMLAAAGRDVHALECGAHWSSDQKTLIAQARSLEAPSALHNNCSGKHAGFVCACCHSGTEVKDYIGYDHP LQKEIRGVMTELTGAVLGRDDCGIDGCSIPAYALSMRGLARGFAKMASGVGLGTERARASKRLIDACMAEPFYVAGSRRA CTRLMKTAPGRIFAKTGAEGVFCAAIPEKGVGIALKCEDGTTRAAEAMVAATLARFFTEDREIHAALMAQANHAMRNWNG MHVGDVRVVTEAFAA
Specific function: Unknown
COG id: COG4448
COG function: function code E; L-asparaginase II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35417; Mature: 35286
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPVLVEVTRGNLVESRHRGMIVAVDAEGKTLFSLGEADARIFPRSACKAMQALPLIES CCCCEEEEECCCCHHHHHCCCEEEEEECCCCEEEEECCCCHHCCCHHHHHHHHHCCCHHC GAADAYGFGDRELALACSSHSGESEHVALAASMLAAAGRDVHALECGAHWSSDQKTLIAQ CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHH ARSLEAPSALHNNCSGKHAGFVCACCHSGTEVKDYIGYDHPLQKEIRGVMTELTGAVLGR HHCCCCCHHHHCCCCCCCCCEEEEECCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCC DDCGIDGCSIPAYALSMRGLARGFAKMASGVGLGTERARASKRLIDACMAEPFYVAGSRR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCCHH ACTRLMKTAPGRIFAKTGAEGVFCAAIPEKGVGIALKCEDGTTRAAEAMVAATLARFFTE HHHHHHHCCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHC DREIHAALMAQANHAMRNWNGMHVGDVRVVTEAFAA CHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHCC >Mature Secondary Structure SNPVLVEVTRGNLVESRHRGMIVAVDAEGKTLFSLGEADARIFPRSACKAMQALPLIES CCCEEEEECCCCHHHHHCCCEEEEEECCCCEEEEECCCCHHCCCHHHHHHHHHCCCHHC GAADAYGFGDRELALACSSHSGESEHVALAASMLAAAGRDVHALECGAHWSSDQKTLIAQ CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHH ARSLEAPSALHNNCSGKHAGFVCACCHSGTEVKDYIGYDHPLQKEIRGVMTELTGAVLGR HHCCCCCHHHHCCCCCCCCCEEEEECCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCC DDCGIDGCSIPAYALSMRGLARGFAKMASGVGLGTERARASKRLIDACMAEPFYVAGSRR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCCHH ACTRLMKTAPGRIFAKTGAEGVFCAAIPEKGVGIALKCEDGTTRAAEAMVAATLARFFTE HHHHHHHCCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHC DREIHAALMAQANHAMRNWNGMHVGDVRVVTEAFAA CHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA