| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150395790
Identifier: 150395790
GI number: 150395790
Start: 614491
End: 615039
Strand: Direct
Name: 150395790
Synonym: Smed_0566
Alternate gene names: NA
Gene position: 614491-615039 (Clockwise)
Preceding gene: 150395785
Following gene: 150395791
Centisome position: 16.25
GC content: 63.02
Gene sequence:
>549_bases ATGGCTCAGGCATTCGATCCCGCAGGCAGGGAGGCGGTGGCCCGCAAATGGGTATGGTTCGTCGCCCTTGGCGTCCTTCT GATCATGTGCGGCGGCATCGCCTTCGGAAACCTGCTGATGGCAACGGTCGCCTCGGTCTATTACGTCGGCCTCATCATGC TCATTGGCGGCCTGCTCAATCTCGCCCATGCCTTTCAGGTCAAGAACTGGGGAAGCGTCCTCTACTGGATCATGAGCGGC GCCTTCTATGCGGGCGCGGGCCTCTTCGCCTTCATCAATCCGGTGCTCGCCTCATCGATATTGACCTTCCTTCTGGCCGT GGCGCTGATTGCCGCCGGTTGCTTCCGCATGTGGGTCGGCTTCAGGCTCCGGCCACTCGGGGGTTGGGGCTGGATGGTCA TCGGCGGCCTCGTCACGCTGCTCGCCGGGCTGATCATCGCCGCCGGTTGGCCAGTCGACAGCCTCTGGATTCTGGGCCTT TTCCTGGCGGTCGATCTTGTCATGCAGGGGCTCGCCTCGATCGCATTCGGCGTTCTCGCAAGGGGCTGA
Upstream 100 bases:
>100_bases TCAATCAATAACAATTCTTTCGTTTTGCCTTTCTTTTTTCTCGGAAATCCGGCTCACTCATCGGGAAGCGTCCACGCTCA TGAGCAGACTGGAGGTTGAA
Downstream 100 bases:
>100_bases CCGGACCTCTTCCGAACCTTCATGAAACTTTCATCTTCGCGAAAGATTTCATTGACTATTGGCTCCGATGCTGGCGCGCG TTTGTGTGTCCTTTCCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MAQAFDPAGREAVARKWVWFVALGVLLIMCGGIAFGNLLMATVASVYYVGLIMLIGGLLNLAHAFQVKNWGSVLYWIMSG AFYAGAGLFAFINPVLASSILTFLLAVALIAAGCFRMWVGFRLRPLGGWGWMVIGGLVTLLAGLIIAAGWPVDSLWILGL FLAVDLVMQGLASIAFGVLARG
Sequences:
>Translated_182_residues MAQAFDPAGREAVARKWVWFVALGVLLIMCGGIAFGNLLMATVASVYYVGLIMLIGGLLNLAHAFQVKNWGSVLYWIMSG AFYAGAGLFAFINPVLASSILTFLLAVALIAAGCFRMWVGFRLRPLGGWGWMVIGGLVTLLAGLIIAAGWPVDSLWILGL FLAVDLVMQGLASIAFGVLARG >Mature_181_residues AQAFDPAGREAVARKWVWFVALGVLLIMCGGIAFGNLLMATVASVYYVGLIMLIGGLLNLAHAFQVKNWGSVLYWIMSGA FYAGAGLFAFINPVLASSILTFLLAVALIAAGCFRMWVGFRLRPLGGWGWMVIGGLVTLLAGLIIAAGWPVDSLWILGLF LAVDLVMQGLASIAFGVLARG
Specific function: Unknown
COG id: COG3247
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19312; Mature: 19180
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQAFDPAGREAVARKWVWFVALGVLLIMCGGIAFGNLLMATVASVYYVGLIMLIGGLLN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAHAFQVKNWGSVLYWIMSGAFYAGAGLFAFINPVLASSILTFLLAVALIAAGCFRMWVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FRLRPLGGWGWMVIGGLVTLLAGLIIAAGWPVDSLWILGLFLAVDLVMQGLASIAFGVLA CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RG CC >Mature Secondary Structure AQAFDPAGREAVARKWVWFVALGVLLIMCGGIAFGNLLMATVASVYYVGLIMLIGGLLN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAHAFQVKNWGSVLYWIMSGAFYAGAGLFAFINPVLASSILTFLLAVALIAAGCFRMWVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FRLRPLGGWGWMVIGGLVTLLAGLIIAAGWPVDSLWILGLFLAVDLVMQGLASIAFGVLA CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA