| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is plsC [H]
Identifier: 150395267
GI number: 150395267
Start: 40085
End: 40954
Strand: Direct
Name: plsC [H]
Synonym: Smed_0039
Alternate gene names: 150395267
Gene position: 40085-40954 (Clockwise)
Preceding gene: 150395266
Following gene: 150395268
Centisome position: 1.06
GC content: 65.17
Gene sequence:
>870_bases ATGATCAATTGGGTGCGGGTCGCGCTTTGCGGCATGCTGCTCGTCATGATCTCGCTGGTGCTGATGCCGGTCCAGATCCT CTGTCTTTGGCTCGATCTGAGGCCCCGACGCTGGCTGCCGCGCTACTGGCATCGTGTCGCCTGCCTGTTGCTTGGACTGC GCGTGCGCGTCCATGGCGAGCTCGATCGCCGCCGCCCCTTGCTCCTAAGCGCAAATCACGTGTCCTGGAAGGACATCCTG GTGCTTTCCTCCGTGGCGGACGTCGTCTTCGTCGCCAAGTCGGACGTCAGGTCCTGGCCGATTTTCGGGGTTCTCGCCCG CCTTCAGGCATCGGTTTTCGTGGAACGGGAGCAGAAGCGCACCACGGGCAATCAGGTCAACGACATCGGACGGCGGCTCG CCGACGGGGAAATCGTCGTGCTCTTCCCCGAAGGAACGACTTCCGACGGCAACCGGCTGCTCGACATCAAATCCTCGCTG TTCGGCGCCGCCGCATCGGCCGTCCCGCAATCGCCGACGGGCGCGGTCCACGTCCAGCCGCTTGCGATTTCCTATACCGG CATCCACGGAATGCCGATGGGCCGCTATTATCGTCCGATCGCCGCCTGGCCGGGCGACATCGGCCTGCTCCCGCACCTTC TCGGCGTGCTGAGAGAGGGCGCTCTTGAGGTCGACGTCGATTTCGGCGAGGCGGTGGACTTTGACCGGCACACCAAACGC AAGGAGGTGAGCCGCATCATCGAGCAGCGCATTCGCGGGATGCTGTCGGACCGGCTGCGGGGGCGCTCCCGATCCACCGC GAAGGGCGAACCGATTCCCGCAGTCCCTGCCGTGCCGGGCGTCTCGTCAGACGTGCAAAGGTCGCGGTAG
Upstream 100 bases:
>100_bases TTATCAGGCGCGGCCGGGCGAGCGCAGCGCGGCGCTTGTCATGCGGCTCGATCTTCGATAGATCGCACCACTGAACGCGA GAGCTGGAAGGTGCCTGCGG
Downstream 100 bases:
>100_bases CACTCGCAATTGCCTCATTCAGGGATCACCCTGAAACGACGGTTGATATCGACCGGCGCCCTACCGGCCCGAAAATGCTT CAAATTTGGGGCGCTATGCA
Product: phospholipid/glycerol acyltransferase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT [H]
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MINWVRVALCGMLLVMISLVLMPVQILCLWLDLRPRRWLPRYWHRVACLLLGLRVRVHGELDRRRPLLLSANHVSWKDIL VLSSVADVVFVAKSDVRSWPIFGVLARLQASVFVEREQKRTTGNQVNDIGRRLADGEIVVLFPEGTTSDGNRLLDIKSSL FGAAASAVPQSPTGAVHVQPLAISYTGIHGMPMGRYYRPIAAWPGDIGLLPHLLGVLREGALEVDVDFGEAVDFDRHTKR KEVSRIIEQRIRGMLSDRLRGRSRSTAKGEPIPAVPAVPGVSSDVQRSR
Sequences:
>Translated_289_residues MINWVRVALCGMLLVMISLVLMPVQILCLWLDLRPRRWLPRYWHRVACLLLGLRVRVHGELDRRRPLLLSANHVSWKDIL VLSSVADVVFVAKSDVRSWPIFGVLARLQASVFVEREQKRTTGNQVNDIGRRLADGEIVVLFPEGTTSDGNRLLDIKSSL FGAAASAVPQSPTGAVHVQPLAISYTGIHGMPMGRYYRPIAAWPGDIGLLPHLLGVLREGALEVDVDFGEAVDFDRHTKR KEVSRIIEQRIRGMLSDRLRGRSRSTAKGEPIPAVPAVPGVSSDVQRSR >Mature_289_residues MINWVRVALCGMLLVMISLVLMPVQILCLWLDLRPRRWLPRYWHRVACLLLGLRVRVHGELDRRRPLLLSANHVSWKDIL VLSSVADVVFVAKSDVRSWPIFGVLARLQASVFVEREQKRTTGNQVNDIGRRLADGEIVVLFPEGTTSDGNRLLDIKSSL FGAAASAVPQSPTGAVHVQPLAISYTGIHGMPMGRYYRPIAAWPGDIGLLPHLLGVLREGALEVDVDFGEAVDFDRHTKR KEVSRIIEQRIRGMLSDRLRGRSRSTAKGEPIPAVPAVPGVSSDVQRSR
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 32194; Mature: 32194
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINWVRVALCGMLLVMISLVLMPVQILCLWLDLRPRRWLPRYWHRVACLLLGLRVRVHGE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEECC LDRRRPLLLSANHVSWKDILVLSSVADVVFVAKSDVRSWPIFGVLARLQASVFVEREQKR CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH TTGNQVNDIGRRLADGEIVVLFPEGTTSDGNRLLDIKSSLFGAAASAVPQSPTGAVHVQP CCCCHHHHHHHHHCCCCEEEEECCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCEEEEE LAISYTGIHGMPMGRYYRPIAAWPGDIGLLPHLLGVLREGALEVDVDFGEAVDFDRHTKR EEEEECCCCCCCCCHHCCCHHCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHH KEVSRIIEQRIRGMLSDRLRGRSRSTAKGEPIPAVPAVPGVSSDVQRSR HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MINWVRVALCGMLLVMISLVLMPVQILCLWLDLRPRRWLPRYWHRVACLLLGLRVRVHGE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEECC LDRRRPLLLSANHVSWKDILVLSSVADVVFVAKSDVRSWPIFGVLARLQASVFVEREQKR CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH TTGNQVNDIGRRLADGEIVVLFPEGTTSDGNRLLDIKSSLFGAAASAVPQSPTGAVHVQP CCCCHHHHHHHHHCCCCEEEEECCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCEEEEE LAISYTGIHGMPMGRYYRPIAAWPGDIGLLPHLLGVLREGALEVDVDFGEAVDFDRHTKR EEEEECCCCCCCCCHHCCCHHCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHH KEVSRIIEQRIRGMLSDRLRGRSRSTAKGEPIPAVPAVPGVSSDVQRSR HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8748025 [H]