Definition | Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence. |
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Accession | NC_009620 |
Length | 1,570,951 |
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Identifier: 150377063
GI number:
Start: 1455769
End: 1457073
Strand: Reverse
Name: Not Available
Synonym: Smed_4944
Alternate gene names: NA
Gene position: NA
Preceding gene: 150377064
Following gene: 150377062
Centisome position: NA
GC content: NA
Gene sequence:
>1305_bases ATGAGAATATCCAAGGCGAGCCTTGTCAGACCTGGAGCGAATGACGTCTTCGGCACCTTCGCCTTGGCCCTGTCGGTCTT CGTCTTCGCCTATTCGGCGCGCTTCGGACAGGTTTCGATTCTCGCCTATTATGGCCTGTGGCTGCCGCTGGTCCTTGTCG ACTACCGAAAGGTTCTCGGCAACTATGCCAGCTATCTCTGGATCCTGTCGTTCACCATCTTCGCCTGCCTCACGATCTTC TGGTCGGCGGCGCCATCGCTGTCGCTGCGGACGGGAATACAATATCTGAGCCACGTCGTCTGCGCTCTCATCGCAATGCG TACGATCGACATCCGCACGCTGACGCGCGGCATGATTGCAGGCGTTGCGATCGTGCTCCTCTATTCGCTGCTCTTCGGCT CGTATCATTACGATCCCCTGGATGGCACCTATAGCTTTGTCGGTGCGTTCGCATCGAAGAACCAGTTGGGCTTCTACGCC TCGCTCGGCATCTATTTCGCTTTCGCCGCCGTTTTTGTTCTCGGCGAAAGAGGCCTCTGGATGGGCGCGGCAGGGGGCGG CGGATTGCTTGCCGCCTATTGCCTCCTCATGTCGCAATCGGCAACGTCGGTGCTGACGACGGCAGCGGTCATCGGCCTCT GCCTCGGCATGCGCGCGATCACGACCTTGCGTCCCGCGAGCAGAAAGATCCTCTTCACCGCCGCATCGGTGTTCGGCGGC GTGGCTGCCGTGGCAATAATCTACGCCGGCGGCATCGATATGATCCTCGGCGCTTTCGGCAAGGACTCGACGCTGACCGG CCGCACCTATCTCTGGCAGCAGGGCATCGAGGCGGCAAAGGCGTCGCCCCTCGTCGGCATCGGCTATCAGGCTTATTGGG TGCAGGGCTTCTCCGAAGCCGAGCGGCTATGGGAGGAGTTCTATATCGGCTCGCGCGCCGGCTTTCATTTCCACAACACC TTCATAGAGACGGCTGTGGAGACGGGTCTCATCGGGCTTGTTCTGCTGACAATGGTGCTGGCCATGACTTTCTTCGGGCA GCTGAAGCGCCTGCTTTCGGAGGATTGCGACCCGGAATCGATGGTCCTCTTCGGTGTTGGAGCACTGCTTTTGGTGCGCG CCTTCGTGGAGATCGATATCCTCACGCCCTACCATATCGGTTCCTTCCTCCTGTACTTCACCGCTGGGAAGCTGACGATC CCGCGCCGCCGGGTGGCGGCATTGCCTTGGCCGCCGCAGCTTCATCCCGCACCCTACGGACGGGCCTTCACTCCGATGAT GCAGCGACCCGGGGAAAACCGTTGA
Upstream 100 bases:
>100_bases GGGAAGCCGACCGAGATCGCGGCCGATGAGAACACCCCAGTGCTGCCTGGGGACGTCATCAAAGTGAATACGGCATTGGC GGCGATGCGGTGAGGCCGGC
Downstream 100 bases:
>100_bases AGACGATCTACGGCATACAATATCTCCGCGCCGCGGCGGCACTCGCCGTTGTTTTCTTCCACGCGGCGGAGAAAACCGGC CATCATTTCACGATCGGTGC
Product: O-antigen polymerase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>434_residues MRISKASLVRPGANDVFGTFALALSVFVFAYSARFGQVSILAYYGLWLPLVLVDYRKVLGNYASYLWILSFTIFACLTIF WSAAPSLSLRTGIQYLSHVVCALIAMRTIDIRTLTRGMIAGVAIVLLYSLLFGSYHYDPLDGTYSFVGAFASKNQLGFYA SLGIYFAFAAVFVLGERGLWMGAAGGGGLLAAYCLLMSQSATSVLTTAAVIGLCLGMRAITTLRPASRKILFTAASVFGG VAAVAIIYAGGIDMILGAFGKDSTLTGRTYLWQQGIEAAKASPLVGIGYQAYWVQGFSEAERLWEEFYIGSRAGFHFHNT FIETAVETGLIGLVLLTMVLAMTFFGQLKRLLSEDCDPESMVLFGVGALLLVRAFVEIDILTPYHIGSFLLYFTAGKLTI PRRRVAALPWPPQLHPAPYGRAFTPMMQRPGENR
Sequences:
NA
Specific function: NA
COG id: COG3307
COG function: function code M; Lipid A core - O-antigen ligase and related enzymes
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA