Definition | Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence. |
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Accession | NC_009620 |
Length | 1,570,951 |
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Identifier: 150376847
GI number:
Start: 1232625
End: 1234394
Strand: Reverse
Name: Not Available
Synonym: Smed_4713
Alternate gene names: NA
Gene position: NA
Preceding gene: 150376859
Following gene: 150376846
Centisome position: NA
GC content: NA
Gene sequence:
>1770_bases ATGCGTGATACTGTTCGAAATCCTTTGATTGGCAAGGGCCATAGCCGATCGATGGCGCCACAAAATGGAACAATGGCTCC AAAGCTGCTCGTTCTGCGGGCCCGGCGCGTATTCGTCGTGACGCTTCTTTATGCAGCCCTGCTCAGCGCCTGCATCAACC TCCTGCAACTCACCATGCCGCTTTATATGATGCAGGTGCATGACAGGGTGTTGAACAGCCAGAGCATGGATACGCTCGTC ATGCTGACGATTCTTGCTGTCGGCGCGCTGATCGTGCTCGGCGTGCTCGATTTCATTCGCGCTCTCACCTTTCAGGCCAT GGGTAGCGCCGTGGTCCGCTGGTTGAACCTGCCGGTTCTGACCGCCGCCGTGCAGGCGTCGGCCGATCAGGGGCTTGCAC GGGCGACGCAGTCTCTGCGCGACCTCACGGAGCTGCGCAGCTTCCTCACTTCTTCTGCGGTGAGCGCTCCGCTCGACGCG GCCTGGTCGCCCATCTTTCTGGGCGTCCTTTTTCTGCTGCATCCCCTCTTCGGATTGATCGGTGCGATCTCCGTCGTCGT GCTCGTCTGCTGCGGCCTCCTCAACGACCTCTTGACGCGTCAGCTCATGAAAGAGGCAAGCCAGGCTAATATTGAGGCAG TCTCGAAAATAGGTGCGACATTACGTCACGCCGAAGCCATCGAAGCGATGGGAATGCTCCCGGCGCTCTCCCAAAAGTGG CGCGCCGCTCAGCTGCACGCCCTGAGCGTGCTGGAAGCCAGCGGAATCAGAAGCAGGGCGATGGCCTCGATCACCCGATC GCTGCGCTTTGCCATTCAGGTGGCGGCGCTCGGCACCGGCGCGCTGCTCGTCATGCGGCAGGAGATTTCTCCCGGAGCGA TGATGGCGACGACCATTCTCGTGGGGCGCCTTCTGCTGCCGTTCGACTCCGTCATTGAAAACTGGCGGCAATGGGTATTG GCGATCGCAAGCTGGCGCCGCGTCGAAGCGGCACTGAAGGAGGACCTCGCCGTTCGTCAGACGATGCCGACGCCGCGCTC GGAAGGCGAGCTTGTCGTCGACAAACTGGTCTATGCGGCACCCGGCCTTGATGTCCCGATCATCAAGGGCATCAACTTCT CGCTCTCGCCCGGTGAGGTGCTGGGTATCGTCGGCCCATCCGCCGCGGGTAAATCCACGCTGGCGCGGCTCCTCACCGGC ATTCTGAAGCCGACTGCCGGCGGTGTTTTTCTGGACGGCAACAACGTCTACCTCTGGGAGCGCAGCTCGTTCGGTCAGGT GGCGGGCTACCTGCCGCAGTCGGTGTCCCTGCTCGAAGGGACGATACGTGAAAACATCGCACGCATGGCGGAGAGCGACC CTTACAAGGTGCTCGAGGCGGCGCGGCTTGCCGATGTGCACGACATGATCGGCAGGCTACCGCTCGGCTATGATACGCCG GTCGGCGATGGCCACCTCACCCTTTCCGGAGGGCAAAGGCAGCGCATCGCTCTGGCCCGCTGCCTCTACGGCCGGCCCCG CCTGCTCGTCCTGGACGAGCCCAACGCCAATCTCGACGCCATCGGCGAGCGCGCTCTTATCCGCGCGATCGAGGAGGCGC GCAGAGACGGCGCCATCGTCATCCTCATCGCCCACCGGCCGGCTATCATGCAGGTGGCCGACAAGCTGCTCGTGCTGGAA GGCGGCCGCATCAGCCAGTTCGGCCCACGAACGGATGTGGTGGCCTCGATGATCCCGGGCGAAACGAGACGCGAAGGTAC TGCTACATGA
Upstream 100 bases:
>100_bases TTTATTGTGTCACACTCATCGCAACAATACTGTGATTTGAGTGAATCTGAACCAGATCGCCCCATGAAACCCGCGAAAGC GTTATTCAGAAGATCGCCAC
Downstream 100 bases:
>100_bases AGACGGAAACGATCCTGCCGGCTCGCCTCGATCTGCAGCCGCCCGCGGAGACGGAAAGCACGGAACGTCGCCTGCCGGTA GCCGCGCAGGGGCGGCTGCC
Product: type I secretion system ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>589_residues MRDTVRNPLIGKGHSRSMAPQNGTMAPKLLVLRARRVFVVTLLYAALLSACINLLQLTMPLYMMQVHDRVLNSQSMDTLV MLTILAVGALIVLGVLDFIRALTFQAMGSAVVRWLNLPVLTAAVQASADQGLARATQSLRDLTELRSFLTSSAVSAPLDA AWSPIFLGVLFLLHPLFGLIGAISVVVLVCCGLLNDLLTRQLMKEASQANIEAVSKIGATLRHAEAIEAMGMLPALSQKW RAAQLHALSVLEASGIRSRAMASITRSLRFAIQVAALGTGALLVMRQEISPGAMMATTILVGRLLLPFDSVIENWRQWVL AIASWRRVEAALKEDLAVRQTMPTPRSEGELVVDKLVYAAPGLDVPIIKGINFSLSPGEVLGIVGPSAAGKSTLARLLTG ILKPTAGGVFLDGNNVYLWERSSFGQVAGYLPQSVSLLEGTIRENIARMAESDPYKVLEAARLADVHDMIGRLPLGYDTP VGDGHLTLSGGQRQRIALARCLYGRPRLLVLDEPNANLDAIGERALIRAIEEARRDGAIVILIAHRPAIMQVADKLLVLE GGRISQFGPRTDVVASMIPGETRREGTAT
Sequences:
NA
Specific function: NA
COG id: COG4618
COG function: function code R; ABC-type protease/lipase transport system, ATPase and permease components
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA