Definition Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence.
Accession NC_009620
Length 1,570,951

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 150376771

GI number:

Start: 1146538

End: 1147455

Strand: Direct

Name: Not Available

Synonym: Smed_4637

Alternate gene names: NA

Gene position: NA

Preceding gene: 150376769

Following gene: 150376772

Centisome position: NA

GC content: NA

Gene sequence:

>918_bases
ATGAGACTGAACTTTACCAGGACACTGATCGGCACCGCCTTCGTGCTTGCGCTTGCCACCGCGCCGGCAGAAGCCGACGT
CGTCGTCTCCTCGAAGATTGATACGGAGGGCGGCGTTCTTGGCAACATCATTCTCTCCATCCTGAACGCCAACGACATCA
AGACGACGGACCGCGTGCAGCTCGGCGCCACACCTGTCGTTCGAAAGGCGATCATCGCCGGCGAGATCGATATCTATCCG
GAATATACCGGCAACGCCGCCTTCTTCTTCGAGAAGGCCGAGGATCCGGCCTGGAAGGATGCGGCCAAAGCCTATGAAGA
GGCAAAGAAGCTCGACTACGAAGCCAACAAGATCGTCTGGCTGACGCCGTCGCCGGCCAATAACACCTGGGCTATCGCGC
TGCGCAAGGACGTTGCCGAAAAGAATAATCTCAAGACGCTCTCGGATTTCGGCAAATATGTTTCCGGCGGTGGCGAGGTC
GTGCTTGCGGCGTCGTCCGAATTCGTCAACTCAGCTGCCGCCTTACCGGCCTTCCAGACAACCTATTCCTTCAAGCTGAA
ACCGGAACAGCTGATCACGCTCTCCGGCGGCGACACCGCCGCGACGATCGCGGCTGCGGCAAACCAGACGAACGGCGCCA
ATGCTGCAATGGTCTACGGCACGGACGGCGGAATCGCTCCCTCTGGCCTTGTCGTCCTCGAGGATGACAAGGGCGTGCAG
CCGGTCTATCAGCCTGCGCCGGTCATTCGCGAGGCGGTTCTGAAGGAAAATCCGGCAATCGAAGAACTGCTGAAACCCGT
CTTCGAAAAGCTCGACCTGACGACCCTGCAGGAGCTCAACGGCCGCGTGCAGGTCGGCGGCGAGTCGGCGAAAGCCGTTG
CGGAGGATTTCCTGAAGGCAAACGGCTTCCTGAAATAG

Upstream 100 bases:

>100_bases
CTATTTTTCGCCGAAAGCTTACATATATGAAATGACTTGGCCGGACGCGGCGGAGAATCTGTGATCAATTTTCGAGGTTG
AAACCGAGAGGGAGACAATC

Downstream 100 bases:

>100_bases
CTTGACGTGAGGGAAGGGCGCTGGTCGGATAAGGCTCCGACCGCGCTTTTTTCATCTTGCGTCGAACGGACGGCCGAATG
GCGATTGGTATAATCCAGGA

Product: glycine betaine ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>305_residues
MRLNFTRTLIGTAFVLALATAPAEADVVVSSKIDTEGGVLGNIILSILNANDIKTTDRVQLGATPVVRKAIIAGEIDIYP
EYTGNAAFFFEKAEDPAWKDAAKAYEEAKKLDYEANKIVWLTPSPANNTWAIALRKDVAEKNNLKTLSDFGKYVSGGGEV
VLAASSEFVNSAAALPAFQTTYSFKLKPEQLITLSGGDTAATIAAAANQTNGANAAMVYGTDGGIAPSGLVVLEDDKGVQ
PVYQPAPVIREAVLKENPAIEELLKPVFEKLDLTTLQELNGRVQVGGESAKAVAEDFLKANGFLK

Sequences:
NA

Specific function: NA

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA