Definition Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence.
Accession NC_009620
Length 1,570,951

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Identifier: 150376753

GI number:

Start: 1118904

End: 1120319

Strand: Reverse

Name: Not Available

Synonym: Smed_4618

Alternate gene names: NA

Gene position: NA

Preceding gene: 150376758

Following gene: 150376750

Centisome position: NA

GC content: NA

Gene sequence:

>1416_bases
ATGAGATATCCCCGCGATCTCCTGGGCCATGGTCCGAACCCGCATATTGCCTGGCCCGATGGCGCCCGGATCGCCGTGCA
ATTCGTGATCAATTACGAGGAGGGCGGAGAGAATTGCGTGCTTCACGGCGACGCCGCCTCGGAGGCCTTTCTCTCGGAAA
TCGTCGGCGCTCAGGCCTGGCCTGCCCAGCGCCACTGGAATATGGAATCGATCTACGAATATGGTGCGCGCGCCGGCTTC
TGGCGGCTGCACCGCCTTTTCACCGAGAGACAAATAGCGGCCACCGTCTATGGCGTCGCCACTGCCCTCAAGCGCTCGCC
CGCCCAGGTGGCGGCCATGCAGGAAGCCGGCTGGGAGATCGCCTCCCACGGCCTCAAATGGATCGAGCACAAGGATTTCG
ACGCCGAGCGCGAGCGCGCCGAGATCGCCGAGGCGATCCGCCTCCACACGATCGTAACCGGAAAGGGGCCGACCGGCTGG
TACACGGGGCGCTGCTCCGTGAACACGCTCGACCTCGTGACCGAAGCCGGCGGCTTCGACTACGTCTCTGATTCCTACGC
CGACGACCTGCCCTACTGGCATGAGCATGCCGGCCGGCATCAGCTCGTCATTCCATACACCCTCGATGCCAACGACATGC
GCTTTGCGACCCCGCAAGGTTTCAACAGCGGCGATCAGTTCTTCAGCTATCTGAAGGACAGCTTCGACGTTCTCTATGCC
GAGGGTACCGCCGGCGCACCGAAGATGATGAGCATCGGCCTCCATTGCCGTCTAGCCGGCCGACCCGGCCGCGCGGCCGC
ACTGGCGCGCTTCCTCGATTACGTGAAGGGCCACGAGAAAGTCTGGGTCGCACGCCGCATCGACATTGCCCGCTACTGGG
CAGAGGCCTATCCGTTCCGGCCGAACGAAAACCGACCGTCGCGGCTCTCGAAGGATGACTTCATTTCTCGATTCGGTGGA
GTTTTCGAGCACTCGGACTGGATCGCCAGACGCGCCTTTGCCGGTGAACTCGCACCGGCTAACGATACGGCATCGGGACT
GCATGCGGCCCTTTGTGCGGTCTTCCGTGAAGCGAGCGAAGAGGAACGGCTGGCGGTCCTGAACGCCCACCCGGATCTTG
CCGGCAAGCTCGCCCAGGCGAAGCGGCTGACAGAGAGCTCGACTTCGGAGCAGGCCTCCGCGGGGCTCGACGCGCTGACC
GACGAGGAGCGCGAGCGTTTCACTGCGCTCAACGATGCCTATGTCGAGAAATTCGGCTTTCCTTTCATCATGGCCGTCAA
GGGGCGCAGCAAGGACGAGATCCTCGCGGCCTTCGAGACCCGCATCGGCAATGATGGAAAAGCCGAATTCAATACGGCAT
GCCTCCAGGTAGAACGGATCGCGTTGTTGCGGCTCCGCGAAATGCTGCCGGAGTGA

Upstream 100 bases:

>100_bases
GGCTCAACCTTCGAGACTTTCAAATTTTTCGGGGGGAATGGGAGATCGGAATTCTCGCTACCAATTGGACGACAAGACAA
TCTCTGGAGGAGCTGCTGTT

Downstream 100 bases:

>100_bases
TGCGAAACAATACCGGGGCGCAATAAGTCGGAGCGGGATGCGGGCGAAAAACCGCGCATTATTCCTGATCCCGCTCTATG
GGCTGTTGAGAATCGGGATG

Product: chitin deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>471_residues
MRYPRDLLGHGPNPHIAWPDGARIAVQFVINYEEGGENCVLHGDAASEAFLSEIVGAQAWPAQRHWNMESIYEYGARAGF
WRLHRLFTERQIAATVYGVATALKRSPAQVAAMQEAGWEIASHGLKWIEHKDFDAERERAEIAEAIRLHTIVTGKGPTGW
YTGRCSVNTLDLVTEAGGFDYVSDSYADDLPYWHEHAGRHQLVIPYTLDANDMRFATPQGFNSGDQFFSYLKDSFDVLYA
EGTAGAPKMMSIGLHCRLAGRPGRAAALARFLDYVKGHEKVWVARRIDIARYWAEAYPFRPNENRPSRLSKDDFISRFGG
VFEHSDWIARRAFAGELAPANDTASGLHAALCAVFREASEEERLAVLNAHPDLAGKLAQAKRLTESSTSEQASAGLDALT
DEERERFTALNDAYVEKFGFPFIMAVKGRSKDEILAAFETRIGNDGKAEFNTACLQVERIALLRLREMLPE

Sequences:
NA

Specific function: NA

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA