Definition Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence.
Accession NC_009620
Length 1,570,951

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Identifier: 150376550

GI number:

Start: 902901

End: 904988

Strand: Direct

Name: Not Available

Synonym: Smed_4409

Alternate gene names: NA

Gene position: NA

Preceding gene: 150376547

Following gene: 150376551

Centisome position: NA

GC content: NA

Gene sequence:

>2088_bases
ATGAATCTGGCTTTTACCGAACTCGATTTCATAAAGCCCGAACTCGGTGCAGATTACACCGGGCAGGGGACGCATTTCGC
CGTCTTCTCGGCGCATGCGGAGAAGATCGAGCTTTGTCTGTTTTCCGAAGACGGGCGCGAGGAAACGGCGCGCATGCCGC
TGCCGAAGCGCGAGGGCGACGTCTGGTCCGGTTACATAGAGGGTATCGGTCCCGGCGCCCTCTACGGTTACCGCGCACAC
GGGCCGTATGATCCACATAAGGGCCATCGCTTCAATCCCAACAAGCTGTTGCTCGACCCCTATGCCAAACAGGTTGCGGG
GGAACTCATCTGGGACGACGCGCTTTTCGGATACACGATCGGTAGCCCTGACGGCGATCTTTCATTCGACGAACGCGACA
GCGCTCCCTTTATGGTGAAGGGCGTCGTTCAGGACCCGGCCTTCGATTGGGCAGGCGAGGAAGCGATCCGCCGCCCCTGG
ACGGAAACGGTCATCTATGAAGCGCATGTCCGCGGCATGACCATGACGCACCCCGCCGTACCCGACGAGCTGCGCGGCAC
ATTCCTCGGCATGGCAAGCGATCCGATCATCGAGCACCTGGTGAAGCTCGGCGTTTCCGCCATCGAATTGATGCCGGTCC
AGTATTTCCTCGACGACCGTTATCTGATCGAGCGCAATCTCAGAAACTACTGGGGCTATCAGACGCTCGGCTTCTTCGCT
CCCCACAAGCGTTATCTGAGGGGCGACCGCATCACGGAATTCAAGACGATGGTGAAGCGGTTTCATGCCGTTGGCATCGA
AGTCCTGATGGATGTCGTCTACAACCATACGGCCGAGGGCTCGGAACGAGGCCCGACATTGAGCTTCCGTGGGTTGGACA
ATTTCAGCTACTACCGCCAGTCGCCCGACAAACCGCGTCATACCTACGACACGACCGGAACCGGCAACACCCTCAACGTT
GCCCATCCGCTGGTGCTGCGGATGGTCCTCGACAGCCTGCGTTACTGGGTGGGAGTGATGCATATCGACGGCTTTCGCTT
CGACCTTGCAAGCACGCTCGGCCGCGAATACATGGAGTTCGATCGCGAGGGCGGTTTCTTCGACGCGATCCGACAGGACC
CGATCCTTGCGGGCGTGAAGCTCATCGCCGAACCGTGGGACGTGGGCCAGGGCGGTTACCAGCTTGGTGGTTTCCCGCCG
CCGTTTCGCGAGTGGAACGACCAGTTCCGCGACGACGTCCGGCGGTTCTGGAGGGGAGACGCCGGCATGGTTCCGGTGCT
TGCGGAGCGCCTCGTCGGTTCGCCGGTACAGTTCAGGCATTCGGATCGTGCCGCAACGTCGTCCATCAATCTGGTGAGCG
CCCATGATGGCTTCACACTGATGGACACGGTCTCCTATGGTGAAAAGCACAATGAGGCGAACGGTGAGGAGAACCGTGAC
GGCCATTCGGACAATCATTCCGACAATATGGGCGCTGAAGGTCCAACTGATAACGCAGAGGTTAACGAGGCACGCAGGCG
GCGGCGCGCCGCCATGGTCGCTACGCTGATGGTCAGCCAGGGCGTGCCGATGGTGCTCGGCGGCGACGAGTTGGGCAACA
GTCAGAGAGGCAACAACAATGCCTATTGCCAGGATAACGAGATCGGATGGCTCGACTGGCCCGGCGCGGACGAGGGCTTT
CTGGACTTCTGCCGCAAGCTCATCGCCTTTCGAAAACAGTCTCCTGTCCTGCGCCAGGAGCGGTTTCTCGACGGGGAGCC
TGACGAGAATGGACGCGTCGAGATCGCCTGGTACAAGGCCGACGGCACCCCCATGGACGAAGATGCCTGGCACACTGGCG
AACTCCGCCTGATCTGCGCCTATATCTGCAGGACCGGCCAGGATGAAGCGTCGCCGGTCGGCGAGATCGTCGTCGTGCTC
AATGCTGGCGAGGGGTGCGAGATAGTCCTTCCGCACGCGAATGGAACGAAACACTGGCTGCGGGTGCTCGACACGGCAGC
CGAAGAGCCGTTCGACATGCGCGCGAGTGCCGACAGGGAGAGCATTCCGGCACAAAGCCTCGTCGCCTACGTTCCGCAGG
AGGGCTGA

Upstream 100 bases:

>100_bases
GGGAAAGTTCCCCCGACGGCCCACCGGGAAAGAAGGAACAAATACCTGCCTGCTGCGTTGCATCAAAGCTGCTGGGCAAG
GCGGTAGAGGGCGCGACTGA

Downstream 100 bases:

>100_bases
AATGGCTAGAGCAATGTCGGTCGACGTGCTGGAATGTCGACCTGCCGGGCTCGCCGATCTCCCGCAGCGGCTCGCGGCGA
TCGGGTCTGTGCCCGAGGAA

Product: glycogen debranching protein GlgX

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>695_residues
MNLAFTELDFIKPELGADYTGQGTHFAVFSAHAEKIELCLFSEDGREETARMPLPKREGDVWSGYIEGIGPGALYGYRAH
GPYDPHKGHRFNPNKLLLDPYAKQVAGELIWDDALFGYTIGSPDGDLSFDERDSAPFMVKGVVQDPAFDWAGEEAIRRPW
TETVIYEAHVRGMTMTHPAVPDELRGTFLGMASDPIIEHLVKLGVSAIELMPVQYFLDDRYLIERNLRNYWGYQTLGFFA
PHKRYLRGDRITEFKTMVKRFHAVGIEVLMDVVYNHTAEGSERGPTLSFRGLDNFSYYRQSPDKPRHTYDTTGTGNTLNV
AHPLVLRMVLDSLRYWVGVMHIDGFRFDLASTLGREYMEFDREGGFFDAIRQDPILAGVKLIAEPWDVGQGGYQLGGFPP
PFREWNDQFRDDVRRFWRGDAGMVPVLAERLVGSPVQFRHSDRAATSSINLVSAHDGFTLMDTVSYGEKHNEANGEENRD
GHSDNHSDNMGAEGPTDNAEVNEARRRRRAAMVATLMVSQGVPMVLGGDELGNSQRGNNNAYCQDNEIGWLDWPGADEGF
LDFCRKLIAFRKQSPVLRQERFLDGEPDENGRVEIAWYKADGTPMDEDAWHTGELRLICAYICRTGQDEASPVGEIVVVL
NAGEGCEIVLPHANGTKHWLRVLDTAAEEPFDMRASADRESIPAQSLVAYVPQEG

Sequences:
NA

Specific function: NA

COG id: COG1523

COG function: function code G; Type II secretory pathway, pullulanase PulA and related glycosidases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA