Definition Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence.
Accession NC_009620
Length 1,570,951

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 150376496

GI number:

Start: 852461

End: 853792

Strand: Direct

Name: Not Available

Synonym: Smed_4354

Alternate gene names: NA

Gene position: NA

Preceding gene: 150376495

Following gene: 150376497

Centisome position: NA

GC content: NA

Gene sequence:

>1332_bases
ATGGATCGCGGGAGCTACGCAGAGGCCGAGCGGACGAGTGGATCGACGGCACGTGTCGGGACCGCCCTCTTCATCGCGAT
TTTCCTGTTCTTCTGGATTTCCATCAACCCCTTCGTGGACTTGACCGGCGAGGCGGTGCTGGATCCTTCCGCCGGAAATT
CCAACCGGCTGAACCAGATCATCTCGCTCCTGCTTTTCGCCGGCATGCTCTGTTACGGACTGATCCATCCCTTGCGGGAA
ACTATTCTGCGGCCCCGGTTGCTGCTGGCGATCCTCTATTGTTGGTTCATCGTCGTTTCGCTGATCTCGGCTCATCCGAT
GCTCGGCATCAAGGGCGTGATCCTTTCCGTAATGGTCACCGTCAATGCCAGCATCTACCTCTTGCTGCCCACTTCGGAAC
GCCACTTCGCCAGGATGCTCGGTATCGCCATCCTCGTCATGCTGAGCGTCGCCTATTACGGCATCGTCTTCAACCCGTCG
CTCGCCATCCACCAAGCCACGGAACTGCGCGAACCGATGAATGCAGGTTTGTGGCGAGGTCACTTCCCTCACAAGAACAG
CGCCGCGGCTGCGATGGTGATCGCAGCCTTCATCGGCCTCTTCGTCATGAACGCCTGGTCGCGCGTCGCCGGCATCGCCA
TCGTCGCGCTTTCCTTCGTCTTCCTCGTCAATACCGGGGGGAAAACGTCTACGGCAATGCTGCCGGCGATTCTGCTGGTC
GCCTTCCTTTTCGAAAAGGTGCGCTTCCTTCGCATCCCGATTGCCGTTGGCGGCGTCGGCCTGTTCAATCTGTTCGCCGT
CGGCTCGGCCGTCATTGTTCCCTTGGGTGAATTCATCAACGGTCTCGGCGTTGACGCAACCTTTACCAATCGCGCCGATA
TCTGGCGTTTCGCCTTCGGCGCGCTCGCCGAACAGCCCCTCACAGGATATGGCTTCAAGGCTTTCTGGCAGACGGAAGAA
CTCGTCTATAGCGGCGGCACGGTTGAGACCTGGGCCGTCGCGGCCGCCAACGGACATAACTCCTACCTCGATATCGCCCT
GATGACGGGATTTCCCGGACTCGCCCTGACCCTGATCTGGATACTCTTCCTACCGCTCCGCAACATTGCGCGAATCGCTC
CGGAGCGCGAACACACGCATCTGACGAGGCTCTTCGTTCGCATATGGCTCTACACGATCTTCAATGCCGGCCTCGAGAGC
CTCTTCTTCGAGGGAGGAAGCCTTCTGTGGTTCACGTTCATGGTCGCGCTCTACGGACTTTCCCTGCAATCCAGCGCGGA
ACTCGCGGCCGTTCCGGCGCGCGCTCGTGAGGGGAGGCTCGTGCATGCTTGA

Upstream 100 bases:

>100_bases
TTCTGGGTCTCGCCCTCGGAATTGCTACGGCCCTCGCCCTCGGCCTTTGGCGGTTCCTTCGCGGCAAAACGCGCGCGGCT
GCCTGAGGGGCCCTGTCAGG

Downstream 100 bases:

>100_bases
GAGGCAAAGCAGGATCGGACCACTTGTCGACAGGCTTGCGAACCGGGCGATCTGGAAACTGGCGCGGTCGCGCCGGCTCT
TGGAAACGGACGTTCCGCTC

Product: O-antigen polymerase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>443_residues
MDRGSYAEAERTSGSTARVGTALFIAIFLFFWISINPFVDLTGEAVLDPSAGNSNRLNQIISLLLFAGMLCYGLIHPLRE
TILRPRLLLAILYCWFIVVSLISAHPMLGIKGVILSVMVTVNASIYLLLPTSERHFARMLGIAILVMLSVAYYGIVFNPS
LAIHQATELREPMNAGLWRGHFPHKNSAAAAMVIAAFIGLFVMNAWSRVAGIAIVALSFVFLVNTGGKTSTAMLPAILLV
AFLFEKVRFLRIPIAVGGVGLFNLFAVGSAVIVPLGEFINGLGVDATFTNRADIWRFAFGALAEQPLTGYGFKAFWQTEE
LVYSGGTVETWAVAAANGHNSYLDIALMTGFPGLALTLIWILFLPLRNIARIAPEREHTHLTRLFVRIWLYTIFNAGLES
LFFEGGSLLWFTFMVALYGLSLQSSAELAAVPARAREGRLVHA

Sequences:
NA

Specific function: NA

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA