Definition Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence.
Accession NC_009620
Length 1,570,951

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Identifier: 150376420

GI number:

Start: 767954

End: 771037

Strand: Direct

Name: Not Available

Synonym: Smed_4278

Alternate gene names: NA

Gene position: NA

Preceding gene: 150376419

Following gene: 150376421

Centisome position: NA

GC content: NA

Gene sequence:

>3084_bases
ATGACATACGAAGATAACAGATTCCCGATTGTTGGCATCGGCGCGTCGGCCGGTGGTATTCCTGCAATGCAGGGGTTCTT
CAAGGGTCTTCCGGTCAATTCCAACATGGCCTTCGTGATCGTGACGCATCTCAGCCCCGAGCATGAGAGCCAACTTCACG
AGGTGGTCGCGCGCTACACAGACTTGCCGGTGTTGGTGGCGGAGGATGGGATGGCGGCCCAGCCAAATCATGTCTATGTC
ATGCCGCAGAATGCCATCCTCTCGATCGCAGGCGGGCACTTGCGTCTGCGCAAGCCCGACGCCGCCACGCGGGAGCGCAA
GCCGATCGATATCTTTCTGAGCACGCTGGCGGAAGATCAAGGCGAGCAGGCGGTCGGTATCATTCTTTCCGGCGGCGACA
GCGATGGAACGCTGGGGGCGAAGGCGATCAAGGAGCATGGAGGGCTGACACTCGCGCAGGCGAGCGACGGGTCAGGTCCG
CGTAACCCGGACATGCCGCAAAGCGCAATCTCCAGCGGCGTGATCGACCTGGCGGTTACAGCCGAAGAGATGGGCGAGAA
GCTTATCGCCTATGCCAACGGTTTCATGGCTGCCCAAGACGTTGCGACAGAGGAGACGCCCGACGCCCGGGAAGCTCGCT
CGGAGATCTATGGACTTCTCCGCAGGCATTCGGGACATGATTTCTCAGGGTATAAATCAAAAACGTTTCTACGCCGCGTA
AGAAGACGCATGCAGATTCTTCAGGTTCGAGCGCTGCCGGATTACTTGAAGCTGCTCAGGCGCGACCCCTCAGAGGTGAC
GAACCTCTTCCGCGACCTATTGATCAACGTCACCAATTTCTTCCGCGACCAGGATGCGTTCAAGGCACTTGAGCAACTGG
TGATACCGCGCCTGTTCGAAGGCCGAAAAGCGGGCGAGCCCGTGCGTGTATGGGTTCCAGGCTGCGCGACGGGGGAAGAA
GTCTATTCCCTTGGCATCCTCATGCGCGAACGCATGGAGAAGCTGGCGGACATGCCGCGGGTTCAGATTTTCGCCACAGA
CATTGATGAATCCGCTCTCGGTGTCGCCCGGGCCGGCCGTTACCCTGAAGCGCTGCTGCAAGGCCTGTCACCTGAGCGCA
TAGCAAGACACTTCAATTGCGACGGCGCCAGCTTCGTGATCAGCAGTGATGTGCGCGAGCTCTGCATCTTCTCCCCGCAT
AGCGTTACGCGCGATCCGCCGTTCTCGCGCATGGATCTGGTATCCTGCCGCAATCTGCTGATCTATCTGGATCAAGAGAC
GCAGAAACGCGTCATCTCCACATTCCATTATGCGCTGAAGCCGGGTGGCTATCTTTTTCTCGGGACGTCCGAGAGTATCG
GTCAGCACGGGGAGCATTTCTCGACCATTGACAAGAAGAATCGCATTTTCCAGGCGCGGGGGCATGATGCAGTGCCCCGT
GTTCCAGCCCTCGTTGGTCCTCCCAAAACGGTGAACACTGCCGATGGCCGTATCCACGGTCTCAGGATCGGCACCTATCC
GCTGCGGCAGGTGGTCGAAGCGCATGTTCTCGAGCGCTTTGCCCCCGCGCATGTCGTCGTCAACGCCGACGGCGAGGCGG
TCTACTACTCCGCTCGCACGGGAAAATACCTCGAAGTTCCCCAGGGCGCCCCGAGCCGGCAGATTCTTACGACTGCAAGA
CGGGGCCTGCGGCTCGACTTGCGGGCGGCGCTGCGCGAGGCCGCCTCGGCACGAAAAGTTGTGGTACGCGAAAATGCTTT
GCTGGAGGACGACGACGATCGGGTGCAACGGGTTAATCTAACCGTCGAGCCATTGGCGGACGGCGCCGGTGGCGAGCCTC
TTTATCTGGTCGTGTTCGATCCCATCGGGCCTCTACAAAGCCGGGCGGAGGCCGAGCATTCCGGATATGACGCGGATACG
GCGGCTATCCTGGAGAGTGAGCTTCGCGAGACGCGCGAGCGACTGCAATCCACCATCGAAGAATACGAGACGGCTCTTGA
AGAGCTCAAGTCCTCTCACGAAGAGCTTGTTTCCGTCAACGAGGAGGCGCAGTCAACCAATGAGGAGCTGGAAGCCTCCA
AGGAGGAAATGCAGTCGCTCAACGAGGAACTGAGCACGATCAATGCGGAACTGACCGCAAAGGTCGAGGAACTGGACCGT
GCGAACAGCGACCTGAAGAACCTGTTCGAGAGCATGCAGATCGCAACGGTGTTTCTCGACCGCAACCTCGTTATCCGCAA
TTTCACACCGGCTGCCTCTTCGTTCTTCAACATCCGGCCGTCCGACGTGGGGCGGCCCCTTACCGAGCTTTCAAGCAAGC
TCGACTATCCGGAACTCAAGGAACAGATCGCTTCGGTCTTCAAGACCGGAGAAGCCGTGGAACACCATCTTGCCCGCGAT
CAGAACGGAAAGCACTTTCTTGTACGCCTGATCCCCTATCGCGACGACGCAGCACGCGTCGATGGTGTCGTGGTCACGCT
TGTCGATGTGACGAAGATGGCCGAGGCCGAGGCGCACCAGCAGATGCTGGTCTCGGAACTCAATCACCGGGTCAAGAACA
TGCTTGCAGTGGTGATCAGCATCGCCAATCATAGCATGCAGACCGCCCGGTCACCGAACGAGTTCAATCAGGCGCTGATC
GGCCGTCTGCAGGCGATGGGGCGGGCTTATGGACTGTTGACCGAGACGCACTGGACCGCTGCTCCCGTCGATCACCTCAT
CAGGCAGGAAATCGAAGCCTTCGGCACAGGTCGCTTCGAAGTGAACGGGCCTGACATCCACCTCGAACCTCAACAGGGGC
TTTCTATAGGCATGGTCATACACGAACTGGCGACCAATGCGTCTAAATACGGAGCCCTGAGCAAATCCGAGGGGAAGGTA
CTGGTTGGCTGGCAATCGGCGAATGGCGTCTTCCGACTCACCTGGCAGGAAAGTGACGGTCCGCCGGTGAGTGAACCGGA
GCGGGAGGGCTTCGGCCTGTCTCTGCTCAAAGGAGAAATAGGCTACAGGCTCGATGGCGAGGTGGAAACGTTCTTCCGTC
CGGAAGGTCTGTTCGTGCGCATAGCTTTTCCGTTCGAAAGGTAG

Upstream 100 bases:

>100_bases
CTGTATCTTCGACGCCCAAATGGCACAGTATTGGGCTCCGCCCGTGAACGGGATCAAACTTCAGTGTCATTCGTTGATAT
TGTGGGAATTGAGGCGTCGG

Downstream 100 bases:

>100_bases
GTGAGCTAAATGGAAGTGCGCGCTCGCATCCTCATTGTGGAAGATGAATGGCTCATAGCGGAAGATCACGCGGCGAGCCT
CCGCGAAGCAGGTTATGTGG

Product: putative PAS/PAC sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1027_residues
MTYEDNRFPIVGIGASAGGIPAMQGFFKGLPVNSNMAFVIVTHLSPEHESQLHEVVARYTDLPVLVAEDGMAAQPNHVYV
MPQNAILSIAGGHLRLRKPDAATRERKPIDIFLSTLAEDQGEQAVGIILSGGDSDGTLGAKAIKEHGGLTLAQASDGSGP
RNPDMPQSAISSGVIDLAVTAEEMGEKLIAYANGFMAAQDVATEETPDAREARSEIYGLLRRHSGHDFSGYKSKTFLRRV
RRRMQILQVRALPDYLKLLRRDPSEVTNLFRDLLINVTNFFRDQDAFKALEQLVIPRLFEGRKAGEPVRVWVPGCATGEE
VYSLGILMRERMEKLADMPRVQIFATDIDESALGVARAGRYPEALLQGLSPERIARHFNCDGASFVISSDVRELCIFSPH
SVTRDPPFSRMDLVSCRNLLIYLDQETQKRVISTFHYALKPGGYLFLGTSESIGQHGEHFSTIDKKNRIFQARGHDAVPR
VPALVGPPKTVNTADGRIHGLRIGTYPLRQVVEAHVLERFAPAHVVVNADGEAVYYSARTGKYLEVPQGAPSRQILTTAR
RGLRLDLRAALREAASARKVVVRENALLEDDDDRVQRVNLTVEPLADGAGGEPLYLVVFDPIGPLQSRAEAEHSGYDADT
AAILESELRETRERLQSTIEEYETALEELKSSHEELVSVNEEAQSTNEELEASKEEMQSLNEELSTINAELTAKVEELDR
ANSDLKNLFESMQIATVFLDRNLVIRNFTPAASSFFNIRPSDVGRPLTELSSKLDYPELKEQIASVFKTGEAVEHHLARD
QNGKHFLVRLIPYRDDAARVDGVVVTLVDVTKMAEAEAHQQMLVSELNHRVKNMLAVVISIANHSMQTARSPNEFNQALI
GRLQAMGRAYGLLTETHWTAAPVDHLIRQEIEAFGTGRFEVNGPDIHLEPQQGLSIGMVIHELATNASKYGALSKSEGKV
LVGWQSANGVFRLTWQESDGPPVSEPEREGFGLSLLKGEIGYRLDGEVETFFRPEGLFVRIAFPFER

Sequences:
NA

Specific function: NA

COG id: COG1352

COG function: function code NT; Methylase of chemotaxis methyl-accepting proteins

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA