Definition | Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence. |
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Accession | NC_009620 |
Length | 1,570,951 |
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Identifier: 150376394
GI number:
Start: 738913
End: 741507
Strand: Direct
Name: Not Available
Synonym: Smed_4252
Alternate gene names: NA
Gene position: NA
Preceding gene: 150376393
Following gene: 150376395
Centisome position: NA
GC content: NA
Gene sequence:
>2595_bases ATGCCGGACATTTCGCCGGGCCGCACAAGCTTCGCGGCCAGTGACAGGGCACTTCGCCGCTTGTCGATATTGAATGCTCA TGTCTTGCCGGGGGCTCCGTCTGCCTCAAGCGATCGCATTCGGTGCGAATTCAACAAACTCCTTCTCGGTTCGGTTGCCT CGATTGCGCTCTTTTGCAGCCTCGACTCCGAGGCTCGGGCGGCCTGCGTCGAAACGAGCCCCGGCGCCTACGACTGCTCG GGGACGGGCCCCGGTCCAACATTTACAGGGCAGTCCGTTACGATCAATGCCGATCCCACCGCGAGCTTCACGAGTGATGT CTCGATCACCGGACCCGGCACGAGCACGCTCAACAATAACGGCACGCTCACCAACAGCCTGCGCGCCACGGACAACGACC GCTTCACGCTCAACAATCGCGGCCTGATCGACGGGACGATTTTTCTCGGCGGCTCGGGAGCGAACGTTATTATCAACTAT GCCGGGGGCGACGTTCAGAACGGCGTCACGAGCACGGGAGATTCCCACGACACAGTAATCAACCGCGGCTTTTTTGCCGG GTCGATCGTTCTCGGCGACGGATACGACGTGCTGGGTCTGATTGAGGGGACCGTCCAGACATCTGTCGATATGGGAGCGG GCGACGACCAGTTCACCTGGCTGGTCGGAAACATTGCTGCAACCGTCCAGATGGGCGAGGGCGACGACCGAGCGGTCTTC GGAAGCCTGACGCAGCAGAATCTCAGCGCCGGCAAGAGGGTCGACGGCGGTCTGGGAATCGACACCCTGGTGTGGGAGAA TACGACCAACGACGATGGAGGCGGTTCGGGCGATCATCCGGAAAACATCGTCAACTGGGAGGAAATCGAGCTACGCAACG GCTCGGAAATGACCTTCATCTACAGCACCGGCAATCTGACGCTCGGCGATTCCGCATCCGGAACCGGGACGCTCTCGATC GACGAGACGAGCGCGGTCAGGGCTGGAAATTCCTTCGGCTATGGCGTCAGAGCGTTCGATCCATCGCAATTGGTGACGGT CTACAATGCCGGCATCATCGATATGACGAACGACACGGTGAATGTCGGTGATCTCCTGCACGACACCTTCACGGTCTACG GCAACTATGTCGGCCAGCAGGGTGGGCTGCAGCTGCACACGGTGCTCGAAAGCGACGATGCGCCCTCGGACAAGCTGGTC ATCAGCGGCACGGGCGCGAGCGCCTCTGGCGGAACCTCGATTTTGATCACCAATGTCGGGGGGCAGGGAGCGCTGACGCT CGCCGACGGCATCAGGGTCGTGGATGCCACTGCCGGTGCAACCACTGAGGGGACTGCCTTCACGCTGGGCGCTCCCGTCG CAGCAGGCATTTTCGAGTATAAGCTCTATCGCGGCGGTCTGACCGAAGATCCGGACAACGACGACGACTGGTTCTTACGC TCCGGCGGCGTTTCGCCACCACCGCCGCCGCCACCGCCGCCACCGCCGCCACCGCCACCGCCGCCGCCGTCACCACCGCC GCCGCCGCCGCCGTCACCACCGCCGCCGCCGCCACCGCCGCCGCCACCGCCGCCGCCGCCGCCGCCGCCGCCGCCACCGC CGGGACCGTCGCCGATCACGCCGTCGGTACGGCCGGAAATACCCGGCTACATCGTGAAGCCAGCGCTTATGCAGAAGATG GGCGTGGCAGCCATTGGCACCTTTCACGAGCGGCAGGGCGACCAATTCCTGCTGAACAGCAACGGGTATCTCCCCGGAGC GTGGGGACGGCTGTTCGGCGAGTCGTTCGATCAAAGCTGGTCGTCCAAGATCAGCAGGTTCGAATTCGAGGTCAGTCCGT CCTCCTCGGGAGAGCTGTGGGGACTTCAGGCCGGTCAGGACTTGATCGGAGCCCTGCACGACGACGGAAGCCAGGATCGC GTCGGCGTGTTCTTTGCTTATACCGGCACGTCGGGATCGAACGGAGGCAATACGCTCGGGAGGCTGCAGGTCGAATCGGG CTCGATCGATCTCCATGCCAACTCGATCGGCGCCTATTGGACGCATATCGGAGCGGACGGCTGGTATGTGGACAGTATAG GGATGTACTCATGGCTGGATGGGGGTTCGAACTCCGATCGGGGCATCGGGGTCGACACATCCGGGAACTCGACCGCCCTT TCGATCGAGGCGGGTTATCCGTTCAGGTTCGATAACGGATGGGTGCTCGAGCCACAGGGCCAGCTTATCTGGCAACATGT AGACCTGGATGACGCGAATGACCGCTTCACCGGCATCGACTATGAGTCCTTCGGAACATGGACGGGCCGTCTCGGTGTGA GGCTCGAAGCAAACACGACGATGAACGATGTTCCAGTCCAGCCCTTCGCCAGCGTCAACTTGTGGCATGATTTCGATCAG GACTATAAGGTCTCGTTCAACCGGGTTCCTGTCGTAACAGAACTGGAACAGACGTTGCTCGAATTGAATGTTGGGTTTTC GGCCCAGATGAGCGAGACGGTCAGCGTCTATGGCGGCCTGCAGTTTGCGACAGGCCTCGACGATGACGACAACAGGGGCT ACGGCGGCAATATAGGCTTGCGCATCAAATGGTAG
Upstream 100 bases:
>100_bases CCCTCAAATTCCGTGGATTGCGCAATTGCCGGTGTGTTGTAACTTACCGTGTACGACTCTGGAGTGCGGACTGCACGCCG GTTTCATCAGGGGGTAATGG
Downstream 100 bases:
>100_bases ATATTCCGCATGAAGAGATTGACCGCCTATGTGATCGACGGACATGAACTGACCATCCGTCCCGCTCCACTGGAGCGTGA TTGGATGAACAGGACAAACC
Product: outer membrane autotransporter
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>864_residues MPDISPGRTSFAASDRALRRLSILNAHVLPGAPSASSDRIRCEFNKLLLGSVASIALFCSLDSEARAACVETSPGAYDCS GTGPGPTFTGQSVTINADPTASFTSDVSITGPGTSTLNNNGTLTNSLRATDNDRFTLNNRGLIDGTIFLGGSGANVIINY AGGDVQNGVTSTGDSHDTVINRGFFAGSIVLGDGYDVLGLIEGTVQTSVDMGAGDDQFTWLVGNIAATVQMGEGDDRAVF GSLTQQNLSAGKRVDGGLGIDTLVWENTTNDDGGGSGDHPENIVNWEEIELRNGSEMTFIYSTGNLTLGDSASGTGTLSI DETSAVRAGNSFGYGVRAFDPSQLVTVYNAGIIDMTNDTVNVGDLLHDTFTVYGNYVGQQGGLQLHTVLESDDAPSDKLV ISGTGASASGGTSILITNVGGQGALTLADGIRVVDATAGATTEGTAFTLGAPVAAGIFEYKLYRGGLTEDPDNDDDWFLR SGGVSPPPPPPPPPPPPPPPPPPSPPPPPPPSPPPPPPPPPPPPPPPPPPPPPPGPSPITPSVRPEIPGYIVKPALMQKM GVAAIGTFHERQGDQFLLNSNGYLPGAWGRLFGESFDQSWSSKISRFEFEVSPSSSGELWGLQAGQDLIGALHDDGSQDR VGVFFAYTGTSGSNGGNTLGRLQVESGSIDLHANSIGAYWTHIGADGWYVDSIGMYSWLDGGSNSDRGIGVDTSGNSTAL SIEAGYPFRFDNGWVLEPQGQLIWQHVDLDDANDRFTGIDYESFGTWTGRLGVRLEANTTMNDVPVQPFASVNLWHDFDQ DYKVSFNRVPVVTELEQTLLELNVGFSAQMSETVSVYGGLQFATGLDDDDNRGYGGNIGLRIKW
Sequences:
NA
Specific function: NA
COG id: COG3468
COG function: function code MU; Type V secretory pathway, adhesin AidA
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA