Definition | Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence. |
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Accession | NC_009620 |
Length | 1,570,951 |
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Identifier: 150376275
GI number:
Start: 601177
End: 603441
Strand: Reverse
Name: Not Available
Synonym: Smed_4133
Alternate gene names: NA
Gene position: NA
Preceding gene: 150376276
Following gene: 150376274
Centisome position: NA
GC content: NA
Gene sequence:
>2265_bases ATGCGCTCTGTTACTTCCTTCAACGATTCGTGGGTCTTCTCCGCGGGCTTCACTGCGGCGGACGCCGGTACGCTCCAGGC GGGGCAGCCGATCAGACTTCCGCACAACGCCATCGAACTGCCGTTCAACTATTTTGACGAGACATGCTACCAGCGCGCCT TCACCTATCAAAAGGTCCTCGCCTGGCGGCCCGACTTCTCCGGCCGCGAAGTCTCGCTCGTCTTCGACGCGGCGATGGCC GATGCGGTCGTGTATCTTAACGGCGAAGAGATCGTCGCGCACAAGGACGGCTATACGCCGATCGAGGCGCGCCTGACCGG CAGGCTTCGGGAGGGCGACAATCTCATCACCGTAAAGATCGACGGTAGTGAGAACCCGGAGATACCGCCGTTCGGCGGCC GGATCGATTATCTCACCTTTGCAGGTATCTATCGCGACGTCTGGCTCAAGATCACGGATCCCGTTTCGATCGCCAATATC AAGATCGAGACCCGCGACGTGCTCTCCGATGCCAGGACCGTCTCCGTCCGTTGCGACCTAGCCAATCCGCAAGGCCTTTC CTTCACCGGGGCCGTATCGGCACTCCTCAAGGATGCCGCCGGCGATGTGCTGGCAGAGGTGGCTGGCGAGACGGCTGGTG GTGGCGTCACCGTCCAGATGGACGGCCTCAAAGGCCTCTCCCTCTGGGACATCGACGATCCGGTGCTCTATGAGGTCGAA GTCGAACTCAGGACCGGCCGAGGGTCCGACCGCGTCGCCGCGCATTTCGGTTTCCGCACCGCGGAGTTCACGAACGAAGG CTTTCGGCTCAACGGCCGTCTGCTGAAGATCCGCGGCCTCAACCGTCATCAGTCCTTCCCCTATGTCGGCTACGCAATGG GGCGCACCGCCCAGGAGCGCGACGCGGAAATCATGAAGCACACCCTTCATTGCAACCTCGTCCGCACGTCGCACTACCCG CAGTCGAAGTGGTTCCTCGACCATTGCGACCGAATTGGCCTGCTCGTCTTCGAGGAAATTCCAGGCTGGCAGCATATAGG CGGCGAGGCCTGGAAAGAGGAGGCGATCCTGAACGTGGCCCGCATGATCGAGCGTGACTGGAACCATCCCTCGATCGTCA TCTGGGGCGTGCGCATCAACGAGTCACAGGATTCCCACGACTTCTACGCGAAGACCAACCGGCTTGCGCGCGAGCTCGAT CCGACGCGGCAGACCGGCGGCGTTCGTTACATCACCGACAGCGAGTTTCTGGAAGATGTCTACACGATGAACGACTTCAT CCTCGGCAACGAGGAACTGCCGGGCTCGAACCGCCCGCGCACGGCGCTCCGCCCGCAGCAGGAATGCACCGGGCTTTCCC GTAAGGTGCCCTATCTCATCACCGAGTTCGGCGGCCATATGTATCCGACGAAGATCTACGATCAGGAGCAGCGGCAGGCC GAACACGTGCGACGGCATCTGGAGGTGCTGAACGCCGCCTATGGCGATCCGAGCATTTCCGGCGCGATCGGCTGGTGCAT GTTCGACTACAACACTCATAAGGATTTCGGCTCCGGCGACCGCATCTGCTATCACGGCGTCATGGACATGTTCCGTGAAC CGAAATTCGCAGCCTATGTCTATGCCAGCCAATGCGATCCGTCCGAAGAAGTGGTGATGAAGCCCGTCACTTTCTGGGCG CGCGGCGAGCGCAATATAGGTGGCGTCCTCCCCCTGATCGTGCTGACGAATTGCGATGAGGTGGAACTGAAATACGGTTC GCTCGTAAAGCGTATCGGCCCGGACCGGGAAAACTATCCTCATTTGCCGCACCCGCCCGTCGTGATCGATCACCGTCACT TCACCAAGGACGAGCTCGGCGTCTGGGGCATGAAGTGGGAAAGCGCTGAATTTACCGGCTTCATCGACGGCAAGCCGGTC GCCGGTCGCCGCATGGTCGCCGACCCCGTTCCGACGACACTCGAGATCGAGGCGGACGGAAAGACGCTTCGCGCCGGAGG CCGCGACAGCATCCGCATCATGCTGCGCGCGCTCGACCAGGCCGGCAACGTCCTGCCCTTCCTGAACGATGCCGTGGCTA TCGAGGTGCATGGTCCGGCGCGGGTCGTCGGTCCTACGCGCCTCGTCTTCCAAGGCGGCTCCACCGGCTTCTGGCTGGAG TCGACGGGAGCCGCCGGCGCCATCGTCGTTACCGCGGTTTCGTCGCGTCTCGGCGGGGTGAAGCTCGAGCTCGTCGCCAT GGCGGAAGGAGAGTGGAACGCATGA
Upstream 100 bases:
>100_bases TTGGCACGATCCTCGCAACGCTGCCGACGCTTGCCGTCTTCTTCTTCATGCAACGCCAGTTCGTCCAGGGCATGCTGGGC TCAGTCAAATAGGAACGATG
Downstream 100 bases:
>100_bases GCAATCTCCAACTCAGCCAGGTTCGTAAATCCTATGGTGGCCTGGAGGTCATCAAGGGCGTCGATCTCGACATAAAATCC GGCGAGTTCGTCGTCTTCGT
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>754_residues MRSVTSFNDSWVFSAGFTAADAGTLQAGQPIRLPHNAIELPFNYFDETCYQRAFTYQKVLAWRPDFSGREVSLVFDAAMA DAVVYLNGEEIVAHKDGYTPIEARLTGRLREGDNLITVKIDGSENPEIPPFGGRIDYLTFAGIYRDVWLKITDPVSIANI KIETRDVLSDARTVSVRCDLANPQGLSFTGAVSALLKDAAGDVLAEVAGETAGGGVTVQMDGLKGLSLWDIDDPVLYEVE VELRTGRGSDRVAAHFGFRTAEFTNEGFRLNGRLLKIRGLNRHQSFPYVGYAMGRTAQERDAEIMKHTLHCNLVRTSHYP QSKWFLDHCDRIGLLVFEEIPGWQHIGGEAWKEEAILNVARMIERDWNHPSIVIWGVRINESQDSHDFYAKTNRLARELD PTRQTGGVRYITDSEFLEDVYTMNDFILGNEELPGSNRPRTALRPQQECTGLSRKVPYLITEFGGHMYPTKIYDQEQRQA EHVRRHLEVLNAAYGDPSISGAIGWCMFDYNTHKDFGSGDRICYHGVMDMFREPKFAAYVYASQCDPSEEVVMKPVTFWA RGERNIGGVLPLIVLTNCDEVELKYGSLVKRIGPDRENYPHLPHPPVVIDHRHFTKDELGVWGMKWESAEFTGFIDGKPV AGRRMVADPVPTTLEIEADGKTLRAGGRDSIRIMLRALDQAGNVLPFLNDAVAIEVHGPARVVGPTRLVFQGGSTGFWLE STGAAGAIVVTAVSSRLGGVKLELVAMAEGEWNA
Sequences:
NA
Specific function: NA
COG id: COG3250
COG function: function code G; Beta-galactosidase/beta-glucuronidase
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA