Definition Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence.
Accession NC_009620
Length 1,570,951

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 150376240

GI number:

Start: 558595

End: 560019

Strand: Direct

Name: Not Available

Synonym: Smed_4096

Alternate gene names: NA

Gene position: NA

Preceding gene: 150376237

Following gene: 150376241

Centisome position: NA

GC content: NA

Gene sequence:

>1425_bases
ATGGAGAGAGAGCCGGTACAGATGCAGCGGAATGCGGCGAGTTCGCTGGGCGAGAGCCTCATTGCCAAGGTCATGGGTAC
GGTGCAGCAGCGGATTGCGGCACGGAGTTTGACGCCGGGTTCCCGGCTCCCTTCCATTCGCTCTTTCGCCTTGTCGATGA
AAGTCTCAAAGTCCACCGTCGTCGAGGCCTATGAACGCCTTCAGGCCGAAGGCCTGATTCGTTCGCGGCCGGGCTCCGGT
TTTTACGTAGCGGCGCCGTTAGCGCCGCTGACGCTCGCCGAGATCGGTCCGCCTGTCGACCGGGCCGTCGATCCCTTATG
GATCTCGCGCCAGGCGCTGGAGCCGGGGGAGGGCGTGCTCCGGCCCGGCTGCGGTTGGCTGTCGCCGTCCTGGATGCCGG
AGGAAGGATTGCGACGCGCCTTGCGCGGCATTGCCCGCGGGAGCAGCGCGACGCTCGTTGATTATGGTGCTCCGCTTGGA
TTGCAGCCCTTGCGCCAGCTTCTGGCACGGCGCGTGGCGCAGCACGGCATCGAGGCATCGCCGGACCAGATATTGCTCAC
CGAATCCGGCACGCAGGCAATCGATTTGCTTTGCCGCTTCCTGCTGAAGCCCGGAGATGCGGTGCTCGTAGACGACCCCT
GCTATTTCAATTTTCACGCACTCCTCAGGGCGCATCAGGCAAGAATCGTCGGCGTTCCATACACGCCCAGCGGACCGGAT
ATAGGCCGCTTCGCCGAAGCGCTCACTGAGCACAAGCCGCGACTTTACATTACCAATTCAGCCCTTCACAATCCGACCGG
CGCAACCCTGTCGCCGCTCGTCGGCCATCGCCTGCTCAAGCTCGCCGAACAATCCGGGTTGACGATCATCGAGGATGATA
TCTTCGCCGATTTTGAAGAAGCGCCCGCGCCGCGTCTTGCGGCCTTCGACGGCCTCGAACGGGTGGTGCACATCGGCAGC
TTCTCGAAAACGCTCTCGGCGGCCGTTCGGTGCGGTTTCATCGTGGCGCCTCGTGATTGGGTGGAGGCCTTGACCGACCT
GAAGATCGCGACGTGCTTCGGTGCAGCCGGGTTCTCTTCGGAATTGGTGATGGCGCTCTTGAAGGACGGCAGCTATCGCA
AACATCTTGAGGCGGTGCGCCAGCGCCTCGCTAAGGCGATGGCCGACGTTGCGGAAAGGCTCGCCCGGATCGGCATCACG
CCCTGGATAGAACCGCAGGCCGGCATGTTCCTCTGGTGCCGCCTGCCGGATGGCATAGACGCCGCCAAACTCGCAAGGGA
ATCTCTCGGCAAAGGCATCGTGCTTGCACCAGGCAATGTCTTCAGTCACGCACAAACGGCTGCCGGCTTTTTGCGCTTCA
ACGTCGCCCAGTCGCAAGACGATCGGCTCTTCCGGGAGCTCGAAGCGCTGATGGCCCTTGCATGA

Upstream 100 bases:

>100_bases
CCGCTTGCTGACTTGTCCATAGGATGCTCCTTTTTCCCCGGTATCGGGCGGGAACGCTGGCTCTTCCAGAGACAGTCAGG
TACAGTTTCGAAGAACTGTT

Downstream 100 bases:

>100_bases
CCGGCAGCCCGAAGAGCTCGGGCTGTGGGTCGCTGATCTGTCTCACGCTACCGGGGATTGACAGTGGCAGGATGGGTAAT
GTTATTACGTTTGAGAATTG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>474_residues
MEREPVQMQRNAASSLGESLIAKVMGTVQQRIAARSLTPGSRLPSIRSFALSMKVSKSTVVEAYERLQAEGLIRSRPGSG
FYVAAPLAPLTLAEIGPPVDRAVDPLWISRQALEPGEGVLRPGCGWLSPSWMPEEGLRRALRGIARGSSATLVDYGAPLG
LQPLRQLLARRVAQHGIEASPDQILLTESGTQAIDLLCRFLLKPGDAVLVDDPCYFNFHALLRAHQARIVGVPYTPSGPD
IGRFAEALTEHKPRLYITNSALHNPTGATLSPLVGHRLLKLAEQSGLTIIEDDIFADFEEAPAPRLAAFDGLERVVHIGS
FSKTLSAAVRCGFIVAPRDWVEALTDLKIATCFGAAGFSSELVMALLKDGSYRKHLEAVRQRLAKAMADVAERLARIGIT
PWIEPQAGMFLWCRLPDGIDAAKLARESLGKGIVLAPGNVFSHAQTAAGFLRFNVAQSQDDRLFRELEALMALA

Sequences:
NA

Specific function: NA

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA