Definition Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence.
Accession NC_009620
Length 1,570,951

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Identifier: 150376202

GI number:

Start: 517850

End: 521068

Strand: Reverse

Name: Not Available

Synonym: Smed_4058

Alternate gene names: NA

Gene position: NA

Preceding gene: 150376203

Following gene: 150376201

Centisome position: NA

GC content: NA

Gene sequence:

>3219_bases
ATGGCAGTCATCAACGGCACTTCTGGAAACAATATTCTCATCGGCACGGGTTCGGACGACAGCCTCAATGGTTTAGCCGG
CGACGACCTGCTTCAGGGACTTGGAGGCGCAGACATCATCAATGGCGGCGCGGGTGTGGACACGGCCGACTATCGCGAGA
AGGCGGCCCCAATCGTAGTCACATTGACCGGTGCGACGGCGGCGACCGTCTTTATCAATGGCGTCGCGGAGGACACGCTT
GCCAACGTAGAGAACGTTTACGGGGGCTCCGGCGACGACTTTATCACCGGCGACGCGCTGAACAATCTCTTCCGGGGAGG
CGGCGGAAACGACGTGCTCGACGGCGGCGGCGGGAATGATACGGCCGACTATACCGACAAGACAGCCTCCGTCGTGGTCA
CGCTGGCCGGGGCGACACCTGTGACAGTTTTCGTGAACGGCATCGCCGAGGACATGATCAGCAACTTCGAAAACGTCTAT
GGCGGTTCGGGCGACGACATCCTAACGGGCGATGATCGGGACAACATTCTTCGCGGTGAGGTAGGAAACGACATTCTCAA
TGGCGGCATTGGCGCCGATTCCCTGTTCGGTGGCGAGGGCAACGATACCGTCGATGGCGGCAACGGGGTCGACACCTTCG
ACCTGCGCGAAAAGACATCCTCCGTCCTCGTGCAGCTCAATGGTGCGAATGGAGCTACAGTCTTCGTCGGCGGCGTTGCG
GAGGATACGATCCGCAACGTCGAGAACATCGTAGGTGGATCGGCAGGCGATACGCTTACCGGCGATGCCGCCGCCAACAA
GCTCTCGGGTGCGCGCGGCAACGACTGGCTCATGGGCGGCAGCGGTGCCGACATACTGGACGGCGGCGAGGACAGCGATA
CGGCGGACTACAGCGACAAGCAGGCTGCCATCGTCGTGGCGCTGAATGGCGGCAATCCCGTCACAGTGACAGTCGGCGGC
CTTGCCGAGGACTCGATCGCCAAGATCGAAAACATCGTCGGGGGTTCGGGAGACGATACGCTCAGCGGCGATGCCGCTGC
CAACACGTTTCGCGGTGGTCTTGGCGCCGACGCGCTTGACGGCGGCTCCGGCAGCGATACCGCGGACTTCAGCGACAAGG
CGCAATCCGTCGTGCTTGCCCTCAACGGAGCGATCGATGCCGTTGCGACCGTCGGCGGAACGGCGGAGGACTCGGTCCGA
AACATCGAAAACATCATCGGCGGTGCGGGAAACGATCAGCTCACGGGCGATGCCGCCGCCAATATGTTCCGTGGCGGCCT
CGGCGCCGATGTGCTGGATGGCGCTGCCGGCAGCGACACGGCGGACTTCAGCGACAAGACGTCATCGCTTGTCGTAACTC
TGGCCGGCGCGAGCCCGGCAACGGTCCTCGTCGGCGGCATCGCGGAGGATACGCTGCGCAACATCGAGAACATCATCGGC
GGTTCGGGCAACGACGTGTTCGTTGGCGACGGCTTGCAGAACGTGTTCGATGGCGGGGCGGGTACCGACACGGCCGACTA
TTCGGCCTCGGCGAAGGCGATCGCTGTAACGCTCAACGGCGCCATTGACGCGAGGGTGTTCATAGGCAACGCGGCCGAGG
ACACGTTGCGCAACGTCGAAAGCATCACTGGAAGCGCCCTGGCGGATGTGATCACCGGCGATGCGCTGGCAAACAGCCTC
CTCGGAGGCGGCGGCGCCGACCTGCTAAAGGGGGGCGGCGGCCAGGACGTTGTGGATGGCGGCAGCGGATCAGACACCAT
AGACTTCGGCGACAAGACCGCTGCCGTCGTCCTGACCCTTGCGGGTGTGGCTAATACGACAGCCACTGTCGGCGGGGTGG
CCGAGGACACGGTCCGCAATATCGAGAACATCTTCGGAGGCGCCGGCGCCGACGTGCTGACAGGCGACGGCAACAGCAAC
ACAATCCGCGGCGGGGCCGGGGCAGACGGCCTGGACGGCGGCGCGGGGGTCGATACGGCCGATTATCGGGACAAGGTGAC
GTCGGTTGTCGTCACGCTCAGTGGCGCGAATGCCGCGCTTGTCAAGGTGGGCGGCCTTAACGAAGATACGATCCGCAACT
TCGAAAACGTTGCAGGCGGTTCGGCCGGCGACACGCTTGTCGGCGACGACCTGGCCAATGTGCTGCTTGGCAATGACGGT
GCCGATACGCTGAAAGGCGGCTTGGGCAGTGACGTGCTGGATGGCGGCAATGGCATCGACACTGCGGATTACCTCGAGAA
AGCCGACGCGATCTCCGTCACGCTCAACGGGACCACGAACGCGACGGTCTTGGTCGGCGGAGTTGCGGAAGACGTCATTC
GCGGTGTAGAAAACATATTGGCGGGGTCCGGTGCCGACACACTTGTCGGCGATGGCGCGAGCAACACGTTTCGTGGAGCG
CTCGGCGCTGACTTCATCGATGGCGGGGCGGGGTCCGATACGGCCGATTATCGCGAGAAGGCGGCGGCTGTCGATGTGAC
CCTCTTCGGCGCCGGTGACAGCTTCGTCTTCGTCGGCGGGGTCGCGGAAGACACAATCCGAAACATTGAAAACGTATTCG
GCGGCAAGGGCAACGATACGCTGACGGGCGACGACTCCGCCAACACCCTCAATGGCAATGACGGCAAGGATTTGCTTACC
GGCGGCGGCGGAGCGGACATTCTTGACGGTGGGGCGGCCTCCGACACGGCGAACTACCGCGACAAGAGTGCATCGGTTTC
CGTCACCCTCAACGGTGCCGCCTCCACGGCTGTCATGGTCGGCGGGGTGGCCGAGGATACGGTCCGCAATATCGAGAACG
TCTGGGGCGGGACCGGCAATGACAGCCTGAGCGGCGACGGCAATGCAAATCTGCTGTCGGGCGGCGGCGGAAGCGACATG
CTGTCCGGCGGCGCGGGGGCGGATATTTTCCAGTTCGACTTCGCTTTGGGAGCGAGCAATGTCGACATGGTTCTGGATTT
TACCGCCGGAGACCGGCTCTTTCTGTCGAAGAGCGTTTTCACCAGCCTGAGCGGCGGTTCGCTGGCAAGCAACCAGTTCT
ACGCGGCGGCCGGCGCAACGGAGGCGCAAGGCGTGAACCAAAGAGTCGTTTACGATACGACGACGGGCGCGCTCTACTAT
GATGCTGACGGCAACCTTTCGGGGCATACGGCCGTGCAGTTTGCAGTCCTCTCTACACAGCCGGGACTGACTGCAGGAGA
TTTCGTGCTCGTCGTGTGA

Upstream 100 bases:

>100_bases
AGAAGCGCATCATCACCAGTGCTCGTTTCTTTCACTAATTCTCTAAGCCGTGGGCGCAGCGTTCCAGCGTCTCATCAGGA
GCCTTCAGGGAGGGATTCCA

Downstream 100 bases:

>100_bases
TCGCCTTGGAGCGAACCCGGAGCCCGCTTCGTGCGGGCATCCGGCTTCGATCACCTCCGATCCTGGGAACACCTGCCCCA
GCTCCGTGTTTGGAGGAATG

Product: Hemolysin-type calcium-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1072_residues
MAVINGTSGNNILIGTGSDDSLNGLAGDDLLQGLGGADIINGGAGVDTADYREKAAPIVVTLTGATAATVFINGVAEDTL
ANVENVYGGSGDDFITGDALNNLFRGGGGNDVLDGGGGNDTADYTDKTASVVVTLAGATPVTVFVNGIAEDMISNFENVY
GGSGDDILTGDDRDNILRGEVGNDILNGGIGADSLFGGEGNDTVDGGNGVDTFDLREKTSSVLVQLNGANGATVFVGGVA
EDTIRNVENIVGGSAGDTLTGDAAANKLSGARGNDWLMGGSGADILDGGEDSDTADYSDKQAAIVVALNGGNPVTVTVGG
LAEDSIAKIENIVGGSGDDTLSGDAAANTFRGGLGADALDGGSGSDTADFSDKAQSVVLALNGAIDAVATVGGTAEDSVR
NIENIIGGAGNDQLTGDAAANMFRGGLGADVLDGAAGSDTADFSDKTSSLVVTLAGASPATVLVGGIAEDTLRNIENIIG
GSGNDVFVGDGLQNVFDGGAGTDTADYSASAKAIAVTLNGAIDARVFIGNAAEDTLRNVESITGSALADVITGDALANSL
LGGGGADLLKGGGGQDVVDGGSGSDTIDFGDKTAAVVLTLAGVANTTATVGGVAEDTVRNIENIFGGAGADVLTGDGNSN
TIRGGAGADGLDGGAGVDTADYRDKVTSVVVTLSGANAALVKVGGLNEDTIRNFENVAGGSAGDTLVGDDLANVLLGNDG
ADTLKGGLGSDVLDGGNGIDTADYLEKADAISVTLNGTTNATVLVGGVAEDVIRGVENILAGSGADTLVGDGASNTFRGA
LGADFIDGGAGSDTADYREKAAAVDVTLFGAGDSFVFVGGVAEDTIRNIENVFGGKGNDTLTGDDSANTLNGNDGKDLLT
GGGGADILDGGAASDTANYRDKSASVSVTLNGAASTAVMVGGVAEDTVRNIENVWGGTGNDSLSGDGNANLLSGGGGSDM
LSGGAGADIFQFDFALGASNVDMVLDFTAGDRLFLSKSVFTSLSGGSLASNQFYAAAGATEAQGVNQRVVYDTTTGALYY
DADGNLSGHTAVQFAVLSTQPGLTAGDFVLVV

Sequences:
NA

Specific function: NA

COG id: COG2931

COG function: function code Q; RTX toxins and related Ca2+-binding proteins

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA