Definition | Clostridium acetobutylicum ATCC 824 plasmid pSOL1, complete sequence. |
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Accession | NC_001988 |
Length | 192,000 |
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Identifier: 15004861
GI number: 15004861
Start: 169010
End: 170311
Strand: Direct
Name: Not Available
Synonym: CA_P0158
Alternate gene names: NA
Gene position: 169010-170311 (Clockwise)
Preceding gene: 15004859
Following gene: 15004862
Centisome position: 88.03
GC content: 31.18
Gene sequence:
>1302_bases ATGTCATTAATTAAAAGTAAACAAATCAGATCTTTAGATGCTATACAGGTGAATCAAACTGATGATATGCAGTTTGTATC AGCAAGTGACAAAGCTAACTTTTCTGACAAATATACTAAAAAGGAGGTTGATGATAAGTTAACTGATGCCAGAGGCGATG TGTCAAAGCAAATTACTGATATAACCACTTCAATCACTAACGTTAACACTAAAATAGACGAGGATGTTAAGACTATTAAT GCTACTACTGTTGATCTTCAAAATCAGATAAATACAAACAACACCACTATAACAAATGAAATTACTGATATAAACACTTC AATAACCAAGGTTGATACTAAAATAGACGACGATGTTAAAACTATTAATGCTACTACCTCTGACCTTCAAAATCAAATAA ATGTAAACAACACTAATATAACAAAACAAATTACTGATATAAACACCTCAATCACTAATGTTGACACTAAAGTAGATGAA GATATTAAAACTATTAATGCTACTACTACCGATTTGCAAAACCAAATAAATGTAAACAACACCAATATAACAAAACAAAT TACTGATATAAACACCTCAATCACTAATGTTGACACTAAAGTAGATGAAGATATTAAAACTATTAATGCTACTACTACCG ATTTGCAAAACCAAATAAATGTAAACAACACTACTATAACAAATCAAATTACTGACATAAACACTTCAATCACCAAGGTT GACACTAAAATAGACGAGGATGTTAAAGCAATTAACTCTACTACTGCCGATTTACAGAGTCAAATTACTGTAAATAACAA CACTCTTACAAATGAAATTCAGACAGTTAATACAAGCCTTCAGAATCAAATTACATCAGCAATTCAAGGCTTATCTTGGA AATCTCCAGTTGACACTTTTGCCGATATAGCAAAAGTATATCCAAATCCTGCAGAAGGTTGGGTTTTAACTGTAGATGAT ACTAACAAAGTATACAGATATGATGCTCCAACTTCTAAATGGGTAGAGTTTCCTATACAAGCTCCAACAACTTATGTTAA GACAATTACAATAAATCCTTCTATTGACAATCAAACCTCCATAGATACTGGAATAAGAAATGATAATACAGGTATTTATA AAACTGGTCACAGCGATGTAGTACTAAAGGTAAATGGCTGTGCTCAAATTTACGGTGCAGACAAAGATTACACTGCAGAT TTTGTTAACAATGATCTTATAATAACTTGGACTAACAGACAATTCAGCCTAGAAACCTCTGATGAGCTTGATATAACTTA TACTCACTTTGAATTAGTATAA
Upstream 100 bases:
>100_bases TTATAAACAAAGTTACAAATTATTGTACGGCACAGTATATAAGTTTAATGAGTTTTGAGGAACTTAAAAAATAAATTAAT TTTTACAAGGAGGAATTATT
Downstream 100 bases:
>100_bases AATATTTATAATTTAAATTACTTATATCAGTGGAGATAACCTTCTTCACTGATATTTTAATAACGAGGTGTATTATGTCA AAAATAAAAGACAAACAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MSLIKSKQIRSLDAIQVNQTDDMQFVSASDKANFSDKYTKKEVDDKLTDARGDVSKQITDITTSITNVNTKIDEDVKTIN ATTVDLQNQINTNNTTITNEITDINTSITKVDTKIDDDVKTINATTSDLQNQINVNNTNITKQITDINTSITNVDTKVDE DIKTINATTTDLQNQINVNNTNITKQITDINTSITNVDTKVDEDIKTINATTTDLQNQINVNNTTITNQITDINTSITKV DTKIDEDVKAINSTTADLQSQITVNNNTLTNEIQTVNTSLQNQITSAIQGLSWKSPVDTFADIAKVYPNPAEGWVLTVDD TNKVYRYDAPTSKWVEFPIQAPTTYVKTITINPSIDNQTSIDTGIRNDNTGIYKTGHSDVVLKVNGCAQIYGADKDYTAD FVNNDLIITWTNRQFSLETSDELDITYTHFELV
Sequences:
>Translated_433_residues MSLIKSKQIRSLDAIQVNQTDDMQFVSASDKANFSDKYTKKEVDDKLTDARGDVSKQITDITTSITNVNTKIDEDVKTIN ATTVDLQNQINTNNTTITNEITDINTSITKVDTKIDDDVKTINATTSDLQNQINVNNTNITKQITDINTSITNVDTKVDE DIKTINATTTDLQNQINVNNTNITKQITDINTSITNVDTKVDEDIKTINATTTDLQNQINVNNTTITNQITDINTSITKV DTKIDEDVKAINSTTADLQSQITVNNNTLTNEIQTVNTSLQNQITSAIQGLSWKSPVDTFADIAKVYPNPAEGWVLTVDD TNKVYRYDAPTSKWVEFPIQAPTTYVKTITINPSIDNQTSIDTGIRNDNTGIYKTGHSDVVLKVNGCAQIYGADKDYTAD FVNNDLIITWTNRQFSLETSDELDITYTHFELV >Mature_432_residues SLIKSKQIRSLDAIQVNQTDDMQFVSASDKANFSDKYTKKEVDDKLTDARGDVSKQITDITTSITNVNTKIDEDVKTINA TTVDLQNQINTNNTTITNEITDINTSITKVDTKIDDDVKTINATTSDLQNQINVNNTNITKQITDINTSITNVDTKVDED IKTINATTTDLQNQINVNNTNITKQITDINTSITNVDTKVDEDIKTINATTTDLQNQINVNNTTITNQITDINTSITKVD TKIDEDVKAINSTTADLQSQITVNNNTLTNEIQTVNTSLQNQITSAIQGLSWKSPVDTFADIAKVYPNPAEGWVLTVDDT NKVYRYDAPTSKWVEFPIQAPTTYVKTITINPSIDNQTSIDTGIRNDNTGIYKTGHSDVVLKVNGCAQIYGADKDYTADF VNNDLIITWTNRQFSLETSDELDITYTHFELV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48094; Mature: 47963
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIKSKQIRSLDAIQVNQTDDMQFVSASDKANFSDKYTKKEVDDKLTDARGDVSKQITD CCCCCCCHHCCCCEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH ITTSITNVNTKIDEDVKTINATTVDLQNQINTNNTTITNEITDINTSITKVDTKIDDDVK HHHHHCCCCCCCCCCHHEEEEEEEEEHHCCCCCCCEEEEEEEECCCEEEEEECCCCCCCE TINATTSDLQNQINVNNTNITKQITDINTSITNVDTKVDEDIKTINATTTDLQNQINVNN EEECCHHHHHHCCCCCCCEEEEEEEECCCEEECCCCCCCCCHHEECCCHHHHHCCEECCC TNITKQITDINTSITNVDTKVDEDIKTINATTTDLQNQINVNNTTITNQITDINTSITKV CEEEEEEEECCCEEECCCCCCCCCHHEECCCHHHHHCEECCCCEEEEEEEEECCCCEEEE DTKIDEDVKAINSTTADLQSQITVNNNTLTNEIQTVNTSLQNQITSAIQGLSWKSPVDTF CCHHHHHHHHHCCCHHCCEEEEEECCCEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH ADIAKVYPNPAEGWVLTVDDTNKVYRYDAPTSKWVEFPIQAPTTYVKTITINPSIDNQTS HHHHHHCCCCCCCEEEEEECCCCEEEECCCCCCEEEEECCCCCEEEEEEEECCCCCCCCC IDTGIRNDNTGIYKTGHSDVVLKVNGCAQIYGADKDYTADFVNNDLIITWTNRQFSLETS CCCCCCCCCCCEEEECCCCEEEEECCEEEEECCCCCCCHHHCCCCEEEEECCCEEEECCC DELDITYTHFELV CCCEEEEEEEEEC >Mature Secondary Structure SLIKSKQIRSLDAIQVNQTDDMQFVSASDKANFSDKYTKKEVDDKLTDARGDVSKQITD CCCCCCHHCCCCEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH ITTSITNVNTKIDEDVKTINATTVDLQNQINTNNTTITNEITDINTSITKVDTKIDDDVK HHHHHCCCCCCCCCCHHEEEEEEEEEHHCCCCCCCEEEEEEEECCCEEEEEECCCCCCCE TINATTSDLQNQINVNNTNITKQITDINTSITNVDTKVDEDIKTINATTTDLQNQINVNN EEECCHHHHHHCCCCCCCEEEEEEEECCCEEECCCCCCCCCHHEECCCHHHHHCCEECCC TNITKQITDINTSITNVDTKVDEDIKTINATTTDLQNQINVNNTTITNQITDINTSITKV CEEEEEEEECCCEEECCCCCCCCCHHEECCCHHHHHCEECCCCEEEEEEEEECCCCEEEE DTKIDEDVKAINSTTADLQSQITVNNNTLTNEIQTVNTSLQNQITSAIQGLSWKSPVDTF CCHHHHHHHHHCCCHHCCEEEEEECCCEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH ADIAKVYPNPAEGWVLTVDDTNKVYRYDAPTSKWVEFPIQAPTTYVKTITINPSIDNQTS HHHHHHCCCCCCCEEEEEECCCCEEEECCCCCCEEEEECCCCCEEEEEEEECCCCCCCCC IDTGIRNDNTGIYKTGHSDVVLKVNGCAQIYGADKDYTADFVNNDLIITWTNRQFSLETS CCCCCCCCCCCEEEECCCCEEEEECCEEEEECCCCCCCHHHCCCCEEEEECCCEEEECCC DELDITYTHFELV CCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA