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The map label for this gene is smf [H]

Identifier: 150009778

GI number: 150009778

Start: 3864261

End: 3865379

Strand: Direct

Name: smf [H]

Synonym: BDI_3193

Alternate gene names: 150009778

Gene position: 3864261-3865379 (Clockwise)

Preceding gene: 150009777

Following gene: 150009782

Centisome position: 80.32

GC content: 48.97

Gene sequence:

>1119_bases
ATGACAGACAAACAGATTTACCAAATTGGCCTTACTATGATTAATGGGGTGGGAGATATCCTAGCCCGCCATCTTCTGGA
AGCGTTGGGGGATGCGGAGGCCGTGTTTACGGAAAAGCGCCAGTCGCTAGAGAAGATACCGGGTATCGGCGATTCGATTA
TCACCGAGATTAAGCGGGCGGATGTGCTTTTACGGGCAGAGAAAGAATTGGCTTTTGCCCAAAAGAACGGTATCTCTATC
TATTTCTTGAAAGATATGAATTATCCGGAACGTCTGCGGGAATGCCCGGACGCTCCGGTTTTATTTTATTTCAAGGGGAA
CGCGGATTTAAACGCCGCCCATATCATCAGCGTTGTGGGTACTCGTAGGGCCTCCACTTATGGACAGGAAGTGACCGAGC
GTTTATTGCGGGATTTGTCCGTGATTTTCCCGGATCTATTGGTCGTTAGCGGACTCGCATATGGCATCGATATTTGCGCT
CATCGGAATGCGTTGAAGAACCAATTGCCCACGGTGGGCGTATTGGCGCATGGTTTGGATCGTATCTATCCTCCCGTGCA
TCGCTCTACGGCGGTCGAGATGTTGGAGCGGGGAGGTTTATTGACCGACTTTCCTAGCGGGACGAATCCGGATCGGCAGA
ACTTTATCCGGCGAAACCGGATCGTAGCCGGTCTGGCGGATGCCACGATCGTTATTGAATCGGCGGAGAAAGGAGGCTCT
TTGATCACGGCGGATATCGCTTTCTCGTATGGCCGGGATGTCTATGCCTTTCCGGGCCGGGTAACGGATATCAACTCTAA
AGGATGTAATGGCTTAATCCGGCAGAATAAAGGAGGCTTGATCACTTGCGCTGACGATTTAATCATGGCGATGCGTTGGG
ATGTCGCTCAAAAGACAGATGCGTTACCGGTCCAAACCCAATTATTATTTCCTGAGAACGAGGAGAGTGAACGGATCTTG
TCGTTCTTGGAAATGCGAAAGGAATCTCATATCAATGAATTGTCCGTAGCCTTGAATCTTCCGGTACATCAATTATCTTC
TCTGCTCTTTGAGTTGGAATTGGATGGAAAGATAAAATCGATGCCGGGAAGCATCTATAAACGAATGAAACCCCTATAA

Upstream 100 bases:

>100_bases
TAAAGGAGTCGTGGAATCCGTTGTCGTAGAGAATGGCAAATTAACCAGAGGAGAATATTTCGATGAGATGCTAAAGCGAA
TAGAATCAAAACAAGCATAA

Downstream 100 bases:

>100_bases
ATAATTAAAGCCTGTCTCACGACAAGCCCTAACCAAACTTTGTTAACCTTAAATCTAATACTATTATGAAAAAACCACAA
TGCAAAGATAAGCTTGTAAA

Product: putative DNA processing Smf-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MTDKQIYQIGLTMINGVGDILARHLLEALGDAEAVFTEKRQSLEKIPGIGDSIITEIKRADVLLRAEKELAFAQKNGISI
YFLKDMNYPERLRECPDAPVLFYFKGNADLNAAHIISVVGTRRASTYGQEVTERLLRDLSVIFPDLLVVSGLAYGIDICA
HRNALKNQLPTVGVLAHGLDRIYPPVHRSTAVEMLERGGLLTDFPSGTNPDRQNFIRRNRIVAGLADATIVIESAEKGGS
LITADIAFSYGRDVYAFPGRVTDINSKGCNGLIRQNKGGLITCADDLIMAMRWDVAQKTDALPVQTQLLFPENEESERIL
SFLEMRKESHINELSVALNLPVHQLSSLLFELELDGKIKSMPGSIYKRMKPL

Sequences:

>Translated_372_residues
MTDKQIYQIGLTMINGVGDILARHLLEALGDAEAVFTEKRQSLEKIPGIGDSIITEIKRADVLLRAEKELAFAQKNGISI
YFLKDMNYPERLRECPDAPVLFYFKGNADLNAAHIISVVGTRRASTYGQEVTERLLRDLSVIFPDLLVVSGLAYGIDICA
HRNALKNQLPTVGVLAHGLDRIYPPVHRSTAVEMLERGGLLTDFPSGTNPDRQNFIRRNRIVAGLADATIVIESAEKGGS
LITADIAFSYGRDVYAFPGRVTDINSKGCNGLIRQNKGGLITCADDLIMAMRWDVAQKTDALPVQTQLLFPENEESERIL
SFLEMRKESHINELSVALNLPVHQLSSLLFELELDGKIKSMPGSIYKRMKPL
>Mature_371_residues
TDKQIYQIGLTMINGVGDILARHLLEALGDAEAVFTEKRQSLEKIPGIGDSIITEIKRADVLLRAEKELAFAQKNGISIY
FLKDMNYPERLRECPDAPVLFYFKGNADLNAAHIISVVGTRRASTYGQEVTERLLRDLSVIFPDLLVVSGLAYGIDICAH
RNALKNQLPTVGVLAHGLDRIYPPVHRSTAVEMLERGGLLTDFPSGTNPDRQNFIRRNRIVAGLADATIVIESAEKGGSL
ITADIAFSYGRDVYAFPGRVTDINSKGCNGLIRQNKGGLITCADDLIMAMRWDVAQKTDALPVQTQLLFPENEESERILS
FLEMRKESHINELSVALNLPVHQLSSLLFELELDGKIKSMPGSIYKRMKPL

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=332, Percent_Identity=31.3253012048193, Blast_Score=136, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488
- InterPro:   IPR010994 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 41236; Mature: 41105

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKQIYQIGLTMINGVGDILARHLLEALGDAEAVFTEKRQSLEKIPGIGDSIITEIKRA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
DVLLRAEKELAFAQKNGISIYFLKDMNYPERLRECPDAPVLFYFKGNADLNAAHIISVVG
HHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHH
TRRASTYGQEVTERLLRDLSVIFPDLLVVSGLAYGIDICAHRNALKNQLPTVGVLAHGLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
RIYPPVHRSTAVEMLERGGLLTDFPSGTNPDRQNFIRRNRIVAGLADATIVIESAEKGGS
HHCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHEEECCEEEEEEECCCCCC
LITADIAFSYGRDVYAFPGRVTDINSKGCNGLIRQNKGGLITCADDLIMAMRWDVAQKTD
EEEEEEEHHCCCEEEECCCEEEECCCCCCCCCEEECCCCEEEEHHHHHHHHHHHHHHCCC
ALPVQTQLLFPENEESERILSFLEMRKESHINELSVALNLPVHQLSSLLFELELDGKIKS
CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHEEEECCCCHHC
MPGSIYKRMKPL
CCHHHHHHCCCC
>Mature Secondary Structure 
TDKQIYQIGLTMINGVGDILARHLLEALGDAEAVFTEKRQSLEKIPGIGDSIITEIKRA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
DVLLRAEKELAFAQKNGISIYFLKDMNYPERLRECPDAPVLFYFKGNADLNAAHIISVVG
HHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHH
TRRASTYGQEVTERLLRDLSVIFPDLLVVSGLAYGIDICAHRNALKNQLPTVGVLAHGLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
RIYPPVHRSTAVEMLERGGLLTDFPSGTNPDRQNFIRRNRIVAGLADATIVIESAEKGGS
HHCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHEEECCEEEEEEECCCCCC
LITADIAFSYGRDVYAFPGRVTDINSKGCNGLIRQNKGGLITCADDLIMAMRWDVAQKTD
EEEEEEEHHCCCEEEECCCEEEECCCCCCCCCEEECCCCEEEEHHHHHHHHHHHHHHCCC
ALPVQTQLLFPENEESERILSFLEMRKESHINELSVALNLPVHQLSSLLFELELDGKIKS
CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHEEEECCCCHHC
MPGSIYKRMKPL
CCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]