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The map label for this gene is 150009709

Identifier: 150009709

GI number: 150009709

Start: 3761169

End: 3761735

Strand: Direct

Name: 150009709

Synonym: BDI_3124

Alternate gene names: NA

Gene position: 3761169-3761735 (Clockwise)

Preceding gene: 150009708

Following gene: 150009710

Centisome position: 78.17

GC content: 39.68

Gene sequence:

>567_bases
GTGCAAAAATTACGAAATGGCGAGCAAGATGCTTATCGATATTTATATGATCGTCATTATGTGGTACTATGTCAATTTGC
GAATGAGTTGGTTGGCGATCCATTTCTAGCGGAGACTATAGTTGGTGATGTGATATTTCATCTGTGGGAAATCCGTGAGA
CATTGGATATAAATAGCTCTCTTCGTGCTTATCTAATGCGGGCTGTGCGGAACCGCTGTTATAACCATATCTCATCAGAA
AAGGAAAAGAAGGAAGTTCGTTTCTCGAAGATTGAGTCTGAGACCTTAGGGTGGGACGCTATGATACAATCGGATGAACA
GCCGCTCGGTATATTACTTGAACGGGAGTTAGAGAAGGAGATCATAAAATCAATCGATAGTTTAGGCGATGAATGTAAAC
GAGTTTTTAGGAAAAGCCGTTTTGAGCATAAGAAAAATGAGGAAATCGCTACAGAGCTAGGAATTTCTGTCAATACGGTT
AAATACCACATAAAGATAGCTTTAACCCGCCTACATCAAGATCTGAGGAAGTATCTGATCTTGTTGATATCATTTTTCTC
CTTGTGA

Upstream 100 bases:

>100_bases
AAGCTGTGGATGGAAGATCGTATAATTAGAAATAATATTTTTAATTTTCATTTTAAAATCTCATCTTTGCGATGAGATGG
ATGTTAAGGAGCGGTTAATA

Downstream 100 bases:

>100_bases
GGATGAAAAAATTGATGTTTCTCACTACCCCTTGAGGAGAAATAACTGTCTTATATATAAAAGCTGGATATTTAATCTAT
ATGGAAGAAAAGAAATCACA

Product: RNA polymerase ECF-type sigma factor

Products: NA

Alternate protein names: RNA Polymerase Sigma-24 Subunit ECF Subfamily; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma-70 Factor; RNA Polymerase Sigma-70 Factor ECF Subfamily; Transcriptional Regulator LuxR Family; ECF Sigma Factor; RNA Polymerase Sigma Factor; RNA Polymerase Sigma-24 Subunit Ecf Subfamily; RNA Polymerase Sigma-H Factor; ECF-Type RNA Polymerase Sigma Factor

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MQKLRNGEQDAYRYLYDRHYVVLCQFANELVGDPFLAETIVGDVIFHLWEIRETLDINSSLRAYLMRAVRNRCYNHISSE
KEKKEVRFSKIESETLGWDAMIQSDEQPLGILLERELEKEIIKSIDSLGDECKRVFRKSRFEHKKNEEIATELGISVNTV
KYHIKIALTRLHQDLRKYLILLISFFSL

Sequences:

>Translated_188_residues
MQKLRNGEQDAYRYLYDRHYVVLCQFANELVGDPFLAETIVGDVIFHLWEIRETLDINSSLRAYLMRAVRNRCYNHISSE
KEKKEVRFSKIESETLGWDAMIQSDEQPLGILLERELEKEIIKSIDSLGDECKRVFRKSRFEHKKNEEIATELGISVNTV
KYHIKIALTRLHQDLRKYLILLISFFSL
>Mature_188_residues
MQKLRNGEQDAYRYLYDRHYVVLCQFANELVGDPFLAETIVGDVIFHLWEIRETLDINSSLRAYLMRAVRNRCYNHISSE
KEKKEVRFSKIESETLGWDAMIQSDEQPLGILLERELEKEIIKSIDSLGDECKRVFRKSRFEHKKNEEIATELGISVNTV
KYHIKIALTRLHQDLRKYLILLISFFSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22256; Mature: 22256

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKLRNGEQDAYRYLYDRHYVVLCQFANELVGDPFLAETIVGDVIFHLWEIRETLDINSS
CCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHH
LRAYLMRAVRNRCYNHISSEKEKKEVRFSKIESETLGWDAMIQSDEQPLGILLERELEKE
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHH
IIKSIDSLGDECKRVFRKSRFEHKKNEEIATELGISVNTVKYHIKIALTRLHQDLRKYLI
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLISFFSL
HHHHHHHC
>Mature Secondary Structure
MQKLRNGEQDAYRYLYDRHYVVLCQFANELVGDPFLAETIVGDVIFHLWEIRETLDINSS
CCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHH
LRAYLMRAVRNRCYNHISSEKEKKEVRFSKIESETLGWDAMIQSDEQPLGILLERELEKE
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHH
IIKSIDSLGDECKRVFRKSRFEHKKNEEIATELGISVNTVKYHIKIALTRLHQDLRKYLI
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLISFFSL
HHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA