| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is 150008258
Identifier: 150008258
GI number: 150008258
Start: 1917238
End: 1919604
Strand: Reverse
Name: 150008258
Synonym: BDI_1627
Alternate gene names: NA
Gene position: 1919604-1917238 (Counterclockwise)
Preceding gene: 150008259
Following gene: 150008257
Centisome position: 39.9
GC content: 49.94
Gene sequence:
>2367_bases ATGAGAAAGTATAGTATGAAGCCGGTCTGTTTCCTCTTGTTCCTGTGCGGGGTTTTCACATCCTGCGTGACACAAGGCAA GAAGGTCCAGCAAGAGGAGCTTAGCCAATATGTAGAGCCTCGGATCGGCACGGCGCATTGCCGTTGGTTTCATTTTACCC CGGGAGCGATGCCTTTCGGTATGGCCAAGCCGGCCCCTTCTACGAACGGGCATATCGGGAATAAATCCGGTTGGGAGGCT ACCGGTTACGATTATCGGGATCAATCGATCGAGGGTTTCCCCTGCTTGCATGAGTTTCAGATCGGTGGAATCGTCTTGAT GCCTACGACGGGTTCATTGAAAACAATTCCCGGGGCGGTAGACGACTCGACAGGTATAGGATACCGTTCCCGTTTTGATC GTGCGGACGAGATCGCTACCGCCGGTTATTATTCCGTTCTCCTAAAAGATTACTCGATCCGGGCGGAGCTTACCGCTACC CCTCGTGTCGCTATCCAGCGTTATACGTTTCCGGCCGGGGAGGATAGCCGTATCTTGTTCGATATAGGAAACCGCCAAGG AGAAAGCGGAGCCGTGCGGGACGCGGAAATTACTTTTACGGAAGACGGGCGTATCGAGGGCTGGGTGATTACCGAGCCTG AATATGTGAGGAAATACCAGCCCGGGGCATCGGTTCCTTTGTATTTCTCGGCGGTGCTGGATAAGGCTCCCGTTGGATAT GGCGCTTTCAACGGGGCGGATATCCGTCCGGATGAACGAAAAGCGACGGGTGTGGGAGCCGGACTTTATTTGACATTCCG TACCCAAGATCAAGAGTCGGTAACCGCTAAAGTAGGTCTTTCCTATACATCCGTGGAGAATGCCCGGTTAAATAGGGAGA CGGAGGCCGCTACCCTTACGTTTGACGAAGCAAGGGAAATCTCTCGCCAAACATGGGAAGAATATTTGGGACGTATCCGG GTAGAGACTCCGGCGCAAGAGGATAAGGTGAAATTCTATACCGGTTTGTATCATGCTTTATTGGGCCGCGGATTGGCTAG CGACGTGAATGGCGCTTATCCGAGAAATGATGGCTCGGTAGGACAAATCCCTTTGAAAGACGGGAAACCGATACATAACT TATATAATACCGATGCCGCTTGGGGAGCGCAATGGAATCTGACGCAGGTTTGGGCTTTGGCCTATCCGGAATATTATTCG GATTATATAAGTAGCCATTTGTTGGTGTACAAGGACGCCGGCTGGCTGGCGGATGGAATCGCTAATAGCCGTTATGTCTC CGGGGTTGGTACGAATTTATTAAGTACGATTATCGCTGGCGCTTATCAATGTGGCATTCGGGATTTCGATGTGAATACGG CCTATGAGGCTTGCTTGAAGAATGAGTTGGATGGGGAGAATCGTCCATTGGGCGCAGGAAAGATCGATACCCGTTATTTC GTGGAATATGGTTATGTGCCTCATTTGGATAAGGGGGACGGGCCGGACGAGGCTTTCATGTTCTCCGCTTCCCATACCTT GGAATATGCTTATAGCGCATGGGCCGTGGCCCAATGGGCGAAGCAACTGGGTAAGACGGACGATTATAACCGTTTGATGG ACTTATCGAAAGGCTGGGAGCGTATCTATGACCCTTCCTGTAATTTTGTCCGTCCTAAAAAGAAGGATGGTACGTTTATC GAGGACTTCAATCCGATGCAAGTATGGCGCGGATTCCAAGAAGGTAACGCTTGGCAATATACATTCTATGTACCGCACGA CGCGAAAGGCTTGGTCGCGAAAGTAGGCGCAGACGTGTTTAACCATCGGTTGGATAGCATCTTCACGGTGTCTCGTAAAT TAATCTTTAGCGGAGGCACGGAAGTAGGGGCTTTCGCCGGTTTGCAAACCTTGTATAACCAAGGAAACCAACCGTGCTTG CACATCCCTTGGATGTTCAACGAGGCCGGTCGTCCCTCGCTTACGCAAAAATGGGTACGGGCGATCTTGAATGAGTTCTA TGGTACGGATGGCATCCACGGTTATGGCTACGGACAAGATGAGGATCAAGGCCAGCTCGGGGCTTGGTACGTGATCTCTT CCTTAGGCTTATTCGATATGAAAGGCTTGACGGATCAAGCGCCTTCTTTCGCTTTGGGCAGTCCTTTATTCGATAAGATT ACGATCCGGCTGAATGACCGCTATTATAAAGGGAAGGAATTCGTGATTGAGGCCCGTAATAATAGTAAGCAAAATGATTA CGTGCAATCGATGAACTTAAACGGGAAACCATTGACGGATACTCGTATTCCTTTCTCGGAGATTATTCAAGGTGGACATT TGGTTTTAGAAATGGGTAGCCAACCAAAAGATGGATATGAGAACTAA
Upstream 100 bases:
>100_bases TTGTAAACGGATAGGGGTGACCTTCAGCAAGCAAGGAGCCAACCGCTCGATCGCTATGGGTGCTTATGTTTTTGCGTTAA ACCATCTATCTAAATAAATT
Downstream 100 bases:
>100_bases AAGTACGAACTCCGCTATATTCCCGATCCTTTTCGGCTTTTTTGTGATGGGATTCGTGGATGTCGTGGGAATTGCCACGA ATTATGTGAAGATGGATTTT
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Glycoside Hydrolase Family Protein; Secreted Protein; Sugar Hydrolase; Outer Membrane Protein; Immunoreactive; Exported Alpha-1 2-Mannosidase; Antigen; Alpha-1 2-Mannosidase Protein; Lipoprotein
Number of amino acids: Translated: 788; Mature: 788
Protein sequence:
>788_residues MRKYSMKPVCFLLFLCGVFTSCVTQGKKVQQEELSQYVEPRIGTAHCRWFHFTPGAMPFGMAKPAPSTNGHIGNKSGWEA TGYDYRDQSIEGFPCLHEFQIGGIVLMPTTGSLKTIPGAVDDSTGIGYRSRFDRADEIATAGYYSVLLKDYSIRAELTAT PRVAIQRYTFPAGEDSRILFDIGNRQGESGAVRDAEITFTEDGRIEGWVITEPEYVRKYQPGASVPLYFSAVLDKAPVGY GAFNGADIRPDERKATGVGAGLYLTFRTQDQESVTAKVGLSYTSVENARLNRETEAATLTFDEAREISRQTWEEYLGRIR VETPAQEDKVKFYTGLYHALLGRGLASDVNGAYPRNDGSVGQIPLKDGKPIHNLYNTDAAWGAQWNLTQVWALAYPEYYS DYISSHLLVYKDAGWLADGIANSRYVSGVGTNLLSTIIAGAYQCGIRDFDVNTAYEACLKNELDGENRPLGAGKIDTRYF VEYGYVPHLDKGDGPDEAFMFSASHTLEYAYSAWAVAQWAKQLGKTDDYNRLMDLSKGWERIYDPSCNFVRPKKKDGTFI EDFNPMQVWRGFQEGNAWQYTFYVPHDAKGLVAKVGADVFNHRLDSIFTVSRKLIFSGGTEVGAFAGLQTLYNQGNQPCL HIPWMFNEAGRPSLTQKWVRAILNEFYGTDGIHGYGYGQDEDQGQLGAWYVISSLGLFDMKGLTDQAPSFALGSPLFDKI TIRLNDRYYKGKEFVIEARNNSKQNDYVQSMNLNGKPLTDTRIPFSEIIQGGHLVLEMGSQPKDGYEN
Sequences:
>Translated_788_residues MRKYSMKPVCFLLFLCGVFTSCVTQGKKVQQEELSQYVEPRIGTAHCRWFHFTPGAMPFGMAKPAPSTNGHIGNKSGWEA TGYDYRDQSIEGFPCLHEFQIGGIVLMPTTGSLKTIPGAVDDSTGIGYRSRFDRADEIATAGYYSVLLKDYSIRAELTAT PRVAIQRYTFPAGEDSRILFDIGNRQGESGAVRDAEITFTEDGRIEGWVITEPEYVRKYQPGASVPLYFSAVLDKAPVGY GAFNGADIRPDERKATGVGAGLYLTFRTQDQESVTAKVGLSYTSVENARLNRETEAATLTFDEAREISRQTWEEYLGRIR VETPAQEDKVKFYTGLYHALLGRGLASDVNGAYPRNDGSVGQIPLKDGKPIHNLYNTDAAWGAQWNLTQVWALAYPEYYS DYISSHLLVYKDAGWLADGIANSRYVSGVGTNLLSTIIAGAYQCGIRDFDVNTAYEACLKNELDGENRPLGAGKIDTRYF VEYGYVPHLDKGDGPDEAFMFSASHTLEYAYSAWAVAQWAKQLGKTDDYNRLMDLSKGWERIYDPSCNFVRPKKKDGTFI EDFNPMQVWRGFQEGNAWQYTFYVPHDAKGLVAKVGADVFNHRLDSIFTVSRKLIFSGGTEVGAFAGLQTLYNQGNQPCL HIPWMFNEAGRPSLTQKWVRAILNEFYGTDGIHGYGYGQDEDQGQLGAWYVISSLGLFDMKGLTDQAPSFALGSPLFDKI TIRLNDRYYKGKEFVIEARNNSKQNDYVQSMNLNGKPLTDTRIPFSEIIQGGHLVLEMGSQPKDGYEN >Mature_788_residues MRKYSMKPVCFLLFLCGVFTSCVTQGKKVQQEELSQYVEPRIGTAHCRWFHFTPGAMPFGMAKPAPSTNGHIGNKSGWEA TGYDYRDQSIEGFPCLHEFQIGGIVLMPTTGSLKTIPGAVDDSTGIGYRSRFDRADEIATAGYYSVLLKDYSIRAELTAT PRVAIQRYTFPAGEDSRILFDIGNRQGESGAVRDAEITFTEDGRIEGWVITEPEYVRKYQPGASVPLYFSAVLDKAPVGY GAFNGADIRPDERKATGVGAGLYLTFRTQDQESVTAKVGLSYTSVENARLNRETEAATLTFDEAREISRQTWEEYLGRIR VETPAQEDKVKFYTGLYHALLGRGLASDVNGAYPRNDGSVGQIPLKDGKPIHNLYNTDAAWGAQWNLTQVWALAYPEYYS DYISSHLLVYKDAGWLADGIANSRYVSGVGTNLLSTIIAGAYQCGIRDFDVNTAYEACLKNELDGENRPLGAGKIDTRYF VEYGYVPHLDKGDGPDEAFMFSASHTLEYAYSAWAVAQWAKQLGKTDDYNRLMDLSKGWERIYDPSCNFVRPKKKDGTFI EDFNPMQVWRGFQEGNAWQYTFYVPHDAKGLVAKVGADVFNHRLDSIFTVSRKLIFSGGTEVGAFAGLQTLYNQGNQPCL HIPWMFNEAGRPSLTQKWVRAILNEFYGTDGIHGYGYGQDEDQGQLGAWYVISSLGLFDMKGLTDQAPSFALGSPLFDKI TIRLNDRYYKGKEFVIEARNNSKQNDYVQSMNLNGKPLTDTRIPFSEIIQGGHLVLEMGSQPKDGYEN
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87990; Mature: 87990
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKYSMKPVCFLLFLCGVFTSCVTQGKKVQQEELSQYVEPRIGTAHCRWFHFTPGAMPFG CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCC MAKPAPSTNGHIGNKSGWEATGYDYRDQSIEGFPCLHEFQIGGIVLMPTTGSLKTIPGAV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCEECCCCC DDSTGIGYRSRFDRADEIATAGYYSVLLKDYSIRAELTATPRVAIQRYTFPAGEDSRILF CCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCCCEEEE DIGNRQGESGAVRDAEITFTEDGRIEGWVITEPEYVRKYQPGASVPLYFSAVLDKAPVGY EECCCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHCCCCCCCCHHHHHHHHCCCCCC GAFNGADIRPDERKATGVGAGLYLTFRTQDQESVTAKVGLSYTSVENARLNRETEAATLT CCCCCCCCCCCCCHHCCCCCEEEEEEECCCCCCEEEEECCEEECCCCCCCCCCCCEEEEE FDEAREISRQTWEEYLGRIRVETPAQEDKVKFYTGLYHALLGRGLASDVNGAYPRNDGSV HHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC GQIPLKDGKPIHNLYNTDAAWGAQWNLTQVWALAYPEYYSDYISSHLLVYKDAGWLADGI CEEECCCCCCHHHHHCCCCCCCCCCCHHEEEEHHCCHHHHHHHHCCEEEEECCCHHHHCC ANSRYVSGVGTNLLSTIIAGAYQCGIRDFDVNTAYEACLKNELDGENRPLGAGKIDTRYF CCCCEECHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEE VEYGYVPHLDKGDGPDEAFMFSASHTLEYAYSAWAVAQWAKQLGKTDDYNRLMDLSKGWE EEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH RIYDPSCNFVRPKKKDGTFIEDFNPMQVWRGFQEGNAWQYTFYVPHDAKGLVAKVGADVF HHCCCCCCCCCCCCCCCCEECCCCHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHH NHRLDSIFTVSRKLIFSGGTEVGAFAGLQTLYNQGNQPCLHIPWMFNEAGRPSLTQKWVR HHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCEEEECEEECCCCCCHHHHHHHH AILNEFYGTDGIHGYGYGQDEDQGQLGAWYVISSLGLFDMKGLTDQAPSFALGSPLFDKI HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEE TIRLNDRYYKGKEFVIEARNNSKQNDYVQSMNLNGKPLTDTRIPFSEIIQGGHLVLEMGS EEEECCCEECCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEEEECC QPKDGYEN CCCCCCCC >Mature Secondary Structure MRKYSMKPVCFLLFLCGVFTSCVTQGKKVQQEELSQYVEPRIGTAHCRWFHFTPGAMPFG CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCC MAKPAPSTNGHIGNKSGWEATGYDYRDQSIEGFPCLHEFQIGGIVLMPTTGSLKTIPGAV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCEECCCCC DDSTGIGYRSRFDRADEIATAGYYSVLLKDYSIRAELTATPRVAIQRYTFPAGEDSRILF CCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCCCEEEE DIGNRQGESGAVRDAEITFTEDGRIEGWVITEPEYVRKYQPGASVPLYFSAVLDKAPVGY EECCCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHCCCCCCCCHHHHHHHHCCCCCC GAFNGADIRPDERKATGVGAGLYLTFRTQDQESVTAKVGLSYTSVENARLNRETEAATLT CCCCCCCCCCCCCHHCCCCCEEEEEEECCCCCCEEEEECCEEECCCCCCCCCCCCEEEEE FDEAREISRQTWEEYLGRIRVETPAQEDKVKFYTGLYHALLGRGLASDVNGAYPRNDGSV HHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC GQIPLKDGKPIHNLYNTDAAWGAQWNLTQVWALAYPEYYSDYISSHLLVYKDAGWLADGI CEEECCCCCCHHHHHCCCCCCCCCCCHHEEEEHHCCHHHHHHHHCCEEEEECCCHHHHCC ANSRYVSGVGTNLLSTIIAGAYQCGIRDFDVNTAYEACLKNELDGENRPLGAGKIDTRYF CCCCEECHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEE VEYGYVPHLDKGDGPDEAFMFSASHTLEYAYSAWAVAQWAKQLGKTDDYNRLMDLSKGWE EEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH RIYDPSCNFVRPKKKDGTFIEDFNPMQVWRGFQEGNAWQYTFYVPHDAKGLVAKVGADVF HHCCCCCCCCCCCCCCCCEECCCCHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHH NHRLDSIFTVSRKLIFSGGTEVGAFAGLQTLYNQGNQPCLHIPWMFNEAGRPSLTQKWVR HHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCEEEECEEECCCCCCHHHHHHHH AILNEFYGTDGIHGYGYGQDEDQGQLGAWYVISSLGLFDMKGLTDQAPSFALGSPLFDKI HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEE TIRLNDRYYKGKEFVIEARNNSKQNDYVQSMNLNGKPLTDTRIPFSEIIQGGHLVLEMGS EEEECCCEECCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEEEECC QPKDGYEN CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA