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The map label for this gene is nccB [H]

Identifier: 150008240

GI number: 150008240

Start: 1884687

End: 1885895

Strand: Reverse

Name: nccB [H]

Synonym: BDI_1606

Alternate gene names: 150008240

Gene position: 1885895-1884687 (Counterclockwise)

Preceding gene: 150008241

Following gene: 150008239

Centisome position: 39.2

GC content: 50.7

Gene sequence:

>1209_bases
ATGAAGAAAATATATTTGGTAGGTGCGATGTGCGCTTACCTGTTTGCCGGTTGTGCGGGAAATGCGTCGCAAGCCGGACA
CGATGAGCATAATCATGAATTAGAGGCTCACGATCATGATCATGAGGGACATGAACACGAAGGCCATGACCATGAGCATG
AGCATGAGGCCGGTGGTACCCATCCCGGCGAGATTGTCTTTAAGAAGGCTTTAGCCGAGGCCGTTGGTTTGCAGACTGTA
ACGGTTAATCCCGCTCCTTTCACGGATGTGATTAAGACGAGCGGACGAGTAATGGCGGCGCAAGGGGAGGAGTCCGTGAT
CGTCGCTACCGTCCCCGGCGTGATCTCGTTTGGTAGCTTGCCATTCGTGGATGGTACGGCGGTACGCAAGGGACAGGCCG
TGTTGAGTATCGCTTCCAACGCCCTCTCTGATGGAGACGTGGCGGCAAAGGCTAAATTCGCTTATGAGACGGCGAAAAAG
GAATACGAGCGTATGCAAGCCTTGGTAGGCGATAAGATCGTATCCGCCAAGGATTTCGAGCAGGCCCGCTTGAATTACGA
GAACGCCAAGGTCGCTTATGAGGCGATAGCGGGAAAACAGACGGCGAAAGGTGTGTCTGTAGTCTCTCCCTTGAATGGTT
ACTTGAAGAACATCCAAGTGAAAGAGGGTGATTATGTATCCGTAGGTCAGCCTTTGGCTACGATCTCGCAAAACAATCGT
TTGGTATTGCGTGCGGACGTGTCTGAGAGGTATTACAACGATCTTCCCATGATCCAAACCGCTAATTTCATGACTCCGTA
TGATAACGCTCTCTATAAATTGTCTGATTTGCGTGGACGGTTGTTATCGTATGGAAAGGCTTCCGATATGAACTCTTTCT
ATGTACCGGTGACTTTCGAGTTCGATAATAAAGGAGCGGTTATCCCCGGTTCTTTCGTGGAGATCTTTTTGTTGACAAAG
CCGATGGAGAATGTCTTGAGCGTGCCTGTCTCCGCCCTTATCGAGGAGCAGGGCGTTTATTCGGTATTTATCCGTCTGGA
TGAGGAAGGCTATAAGAAGCAATGGGTGACGCTGGGAGCGAATAACGGCTCGGAGGTACAGATCCTTTCCGGATTGAAAC
CGGGCGATGAGGTCGTGACCCGTGGCGCTTACCAGATCAAGTTGTCTTCCGCTTCTAACGCGATACCGGCTCATAGCCAT
AGCCATTAA

Upstream 100 bases:

>100_bases
TCGTGCCCCTCCTATGTCTTGATACCTCGTTTGTGAGAGCGGGTGAGGACAGACTTGCCCCTATCTATTTATTATTAACG
ATATCAAGATTTTTTACACA

Downstream 100 bases:

>100_bases
TAGGAGGGATGTTGCATGTTAAATAAGATAATTTATTATTCATTGCACAACCGGTTGGTAATCTTGGTTTGTGCGCTATT
GCTGATGATCTGGGGTACGT

Product: cation efflux system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MKKIYLVGAMCAYLFAGCAGNASQAGHDEHNHELEAHDHDHEGHEHEGHDHEHEHEAGGTHPGEIVFKKALAEAVGLQTV
TVNPAPFTDVIKTSGRVMAAQGEESVIVATVPGVISFGSLPFVDGTAVRKGQAVLSIASNALSDGDVAAKAKFAYETAKK
EYERMQALVGDKIVSAKDFEQARLNYENAKVAYEAIAGKQTAKGVSVVSPLNGYLKNIQVKEGDYVSVGQPLATISQNNR
LVLRADVSERYYNDLPMIQTANFMTPYDNALYKLSDLRGRLLSYGKASDMNSFYVPVTFEFDNKGAVIPGSFVEIFLLTK
PMENVLSVPVSALIEEQGVYSVFIRLDEEGYKKQWVTLGANNGSEVQILSGLKPGDEVVTRGAYQIKLSSASNAIPAHSH
SH

Sequences:

>Translated_402_residues
MKKIYLVGAMCAYLFAGCAGNASQAGHDEHNHELEAHDHDHEGHEHEGHDHEHEHEAGGTHPGEIVFKKALAEAVGLQTV
TVNPAPFTDVIKTSGRVMAAQGEESVIVATVPGVISFGSLPFVDGTAVRKGQAVLSIASNALSDGDVAAKAKFAYETAKK
EYERMQALVGDKIVSAKDFEQARLNYENAKVAYEAIAGKQTAKGVSVVSPLNGYLKNIQVKEGDYVSVGQPLATISQNNR
LVLRADVSERYYNDLPMIQTANFMTPYDNALYKLSDLRGRLLSYGKASDMNSFYVPVTFEFDNKGAVIPGSFVEIFLLTK
PMENVLSVPVSALIEEQGVYSVFIRLDEEGYKKQWVTLGANNGSEVQILSGLKPGDEVVTRGAYQIKLSSASNAIPAHSH
SH
>Mature_402_residues
MKKIYLVGAMCAYLFAGCAGNASQAGHDEHNHELEAHDHDHEGHEHEGHDHEHEHEAGGTHPGEIVFKKALAEAVGLQTV
TVNPAPFTDVIKTSGRVMAAQGEESVIVATVPGVISFGSLPFVDGTAVRKGQAVLSIASNALSDGDVAAKAKFAYETAKK
EYERMQALVGDKIVSAKDFEQARLNYENAKVAYEAIAGKQTAKGVSVVSPLNGYLKNIQVKEGDYVSVGQPLATISQNNR
LVLRADVSERYYNDLPMIQTANFMTPYDNALYKLSDLRGRLLSYGKASDMNSFYVPVTFEFDNKGAVIPGSFVEIFLLTK
PMENVLSVPVSALIEEQGVYSVFIRLDEEGYKKQWVTLGANNGSEVQILSGLKPGDEVVTRGAYQIKLSSASNAIPAHSH
SH

Specific function: Component of the NCC cation efflux system that confers resistance to nickel, cobalt and cadmium [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005695
- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 43526; Mature: 43526

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIYLVGAMCAYLFAGCAGNASQAGHDEHNHELEAHDHDHEGHEHEGHDHEHEHEAGGT
CCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
HPGEIVFKKALAEAVGLQTVTVNPAPFTDVIKTSGRVMAAQGEESVIVATVPGVISFGSL
CCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHCCCCEEEECCCCCEEEEECCCHHCCCCC
PFVDGTAVRKGQAVLSIASNALSDGDVAAKAKFAYETAKKEYERMQALVGDKIVSAKDFE
CCCCCCHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHH
QARLNYENAKVAYEAIAGKQTAKGVSVVSPLNGYLKNIQVKEGDYVSVGQPLATISQNNR
HHHCCCCCHHHHHHHHCCCHHCCCCEEHHHHHHHHHCEEECCCCEEECCCCHHEECCCCE
LVLRADVSERYYNDLPMIQTANFMTPYDNALYKLSDLRGRLLSYGKASDMNSFYVPVTFE
EEEEECCHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE
FDNKGAVIPGSFVEIFLLTKPMENVLSVPVSALIEEQGVYSVFIRLDEEGYKKQWVTLGA
ECCCCCCCCCHHEEEEEECCCHHHHHHCCHHHHHHHCCEEEEEEEECCCCCCEEEEEEEC
NNGSEVQILSGLKPGDEVVTRGAYQIKLSSASNAIPAHSHSH
CCCCEEEEEECCCCCHHHHHCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKKIYLVGAMCAYLFAGCAGNASQAGHDEHNHELEAHDHDHEGHEHEGHDHEHEHEAGGT
CCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
HPGEIVFKKALAEAVGLQTVTVNPAPFTDVIKTSGRVMAAQGEESVIVATVPGVISFGSL
CCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHCCCCEEEECCCCCEEEEECCCHHCCCCC
PFVDGTAVRKGQAVLSIASNALSDGDVAAKAKFAYETAKKEYERMQALVGDKIVSAKDFE
CCCCCCHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHH
QARLNYENAKVAYEAIAGKQTAKGVSVVSPLNGYLKNIQVKEGDYVSVGQPLATISQNNR
HHHCCCCCHHHHHHHHCCCHHCCCCEEHHHHHHHHHCEEECCCCEEECCCCHHEECCCCE
LVLRADVSERYYNDLPMIQTANFMTPYDNALYKLSDLRGRLLSYGKASDMNSFYVPVTFE
EEEEECCHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE
FDNKGAVIPGSFVEIFLLTKPMENVLSVPVSALIEEQGVYSVFIRLDEEGYKKQWVTLGA
ECCCCCCCCCHHEEEEEECCCHHHHHHCCHHHHHHHCCEEEEEEEECCCCCCEEEEEEEC
NNGSEVQILSGLKPGDEVVTRGAYQIKLSSASNAIPAHSHSH
CCCCEEEEEECCCCCHHHHHCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7961470 [H]