| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008166
Identifier: 150008166
GI number: 150008166
Start: 1795732
End: 1796940
Strand: Reverse
Name: 150008166
Synonym: BDI_1532
Alternate gene names: NA
Gene position: 1796940-1795732 (Counterclockwise)
Preceding gene: 150008167
Following gene: 150008164
Centisome position: 37.35
GC content: 50.62
Gene sequence:
>1209_bases ATGAGAACATCCGATAATATGAAAGGAACCTTGGCGGATATCGCTTCCTTGGTCAAGGACGAGTTTAAGACGATCTCCAC GAGCTACGCTATCTTGCTCGTCTTGGTAGGAGGTATATTTCTCTATGGCCTGCTGTATAATTATATGTATGCCCCGGATC TGGTGCGTAACGCCCCGGTGGTAGTCGTCGATGACTCAAAGACCGACTTGAGCCGGGAGTACATCCGTTTACTGAACGCC ACTCCGCAAGTCTCGGTAATCGCCGATGGTTTAGATTACGCCGAGGCGCAGGAGTGGATGAAGGAGGGGGATGCCGTAGG TATCTTGTATCTTCCCTCTGATTTCGAGACCCGGGTGGCACGAGGGAATGAATCCCTGTTTATCATGTACCAGACGACAA GCGCCTTCCTATATTATATGGCGATGCAGGAGGCGTCCAGCGGTGCCATGTTGGCGTTGAACGATCGGTATCGTCCGGAG ATGTTGGTGTTCTTGCCCCAGCAAGACGCTTCCAAGATCGTTTCGGCGCAACCCATATCAGTGGTCGGGACGGCGTTGTA TAATTTTACGGAAGGATATGGAACCTATTTGATCCCGGCGGTATTGATCGTCATTATGTTCCAGACCTTGTTGATGGTGA TCGGTATGATAAGCGGGGAAGAGCGGGATTCGGGTACCATCGTTCGTTTCGCTTCCGAGGGATTATCCTTTGGCCGGATC GCTAGGGTGATAATCAGCAAGACCTTTGTGTATTGCGTATTGTATACGATTTTCGCTTTGTTCTTGTTGGGCTTGATACC GCTATTGTTTGGCCTGCCGGATATCGGTAATTATCTGAACACCTTGATCCTGCTGATACCCTTCTTGCTGGCTACCAGCT TCTTTGGGCTGGCCGCCTCTTATTTCTTTACGGACTCGGAGGCTCCGTTATTGATGATCGCCTTCTTCTCGGTAGGCTTG ATCTTTCTTTCCGGAGTCTCTTATCCCTTGGAATTGATGCCTTGGTATTGGCAAATGGCCCATTATATCATTCCGGCGGC TCCCGCTACGCTGGCCTATGTACAGCTCAACTCGATGGGAGCGTCGATTGAGCAAGTCGGTGTGGAGTACGTGACGTTGT GGGTGCAATGTGCCGTTTATTTCCTCTTGGCTTGCTGGGTGTACCGGCGGAATATCTTAAAGGCTAGCCGTGCCTTGTCG TCATTGTAG
Upstream 100 bases:
>100_bases TTTCCTTATACATGGGTAAACGTAAGTTCGTTGTTTGCGTTTATGTTATTGGCATTGGTGCTGTTGCCACATTTGAAAAC CGCTATTTTAAGTCATAAAT
Downstream 100 bases:
>100_bases CTCCCGTATCCTGACGTCGATGCCGCTATCTTTCAAGGCATCTTTCAACTCGCCGATCTTCGTATCCCCGTAATGGTAAG GGTATAAGATTTTAGGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: ABC-Type Multidrug Transport System Permease Component; ABC-Type Multidrug Transport System Protein; ABC-2 Type Transport System Permease Protein; Conserved Transporter; Transport-Related Membrane Protein; ABC-2 Type Transport System Permease; Integral Membrane Protein; Multidrug ABC Transporter Permease Component; ABC-2 Type Transporter Domain Protein; ABC Transporter Permease; Multidrug ABC Transporter Permease Protein; ABC-2 Type Transporter Family; ABC Transporter Transmembrane Protein; Permease Component Of ABC Transporter; Antibiotic Transport System Permease Protein
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MRTSDNMKGTLADIASLVKDEFKTISTSYAILLVLVGGIFLYGLLYNYMYAPDLVRNAPVVVVDDSKTDLSREYIRLLNA TPQVSVIADGLDYAEAQEWMKEGDAVGILYLPSDFETRVARGNESLFIMYQTTSAFLYYMAMQEASSGAMLALNDRYRPE MLVFLPQQDASKIVSAQPISVVGTALYNFTEGYGTYLIPAVLIVIMFQTLLMVIGMISGEERDSGTIVRFASEGLSFGRI ARVIISKTFVYCVLYTIFALFLLGLIPLLFGLPDIGNYLNTLILLIPFLLATSFFGLAASYFFTDSEAPLLMIAFFSVGL IFLSGVSYPLELMPWYWQMAHYIIPAAPATLAYVQLNSMGASIEQVGVEYVTLWVQCAVYFLLACWVYRRNILKASRALS SL
Sequences:
>Translated_402_residues MRTSDNMKGTLADIASLVKDEFKTISTSYAILLVLVGGIFLYGLLYNYMYAPDLVRNAPVVVVDDSKTDLSREYIRLLNA TPQVSVIADGLDYAEAQEWMKEGDAVGILYLPSDFETRVARGNESLFIMYQTTSAFLYYMAMQEASSGAMLALNDRYRPE MLVFLPQQDASKIVSAQPISVVGTALYNFTEGYGTYLIPAVLIVIMFQTLLMVIGMISGEERDSGTIVRFASEGLSFGRI ARVIISKTFVYCVLYTIFALFLLGLIPLLFGLPDIGNYLNTLILLIPFLLATSFFGLAASYFFTDSEAPLLMIAFFSVGL IFLSGVSYPLELMPWYWQMAHYIIPAAPATLAYVQLNSMGASIEQVGVEYVTLWVQCAVYFLLACWVYRRNILKASRALS SL >Mature_402_residues MRTSDNMKGTLADIASLVKDEFKTISTSYAILLVLVGGIFLYGLLYNYMYAPDLVRNAPVVVVDDSKTDLSREYIRLLNA TPQVSVIADGLDYAEAQEWMKEGDAVGILYLPSDFETRVARGNESLFIMYQTTSAFLYYMAMQEASSGAMLALNDRYRPE MLVFLPQQDASKIVSAQPISVVGTALYNFTEGYGTYLIPAVLIVIMFQTLLMVIGMISGEERDSGTIVRFASEGLSFGRI ARVIISKTFVYCVLYTIFALFLLGLIPLLFGLPDIGNYLNTLILLIPFLLATSFFGLAASYFFTDSEAPLLMIAFFSVGL IFLSGVSYPLELMPWYWQMAHYIIPAAPATLAYVQLNSMGASIEQVGVEYVTLWVQCAVYFLLACWVYRRNILKASRALS SL
Specific function: Unknown
COG id: COG0842
COG function: function code V; ABC-type multidrug transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44728; Mature: 44728
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTSDNMKGTLADIASLVKDEFKTISTSYAILLVLVGGIFLYGLLYNYMYAPDLVRNAPV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCE VVVDDSKTDLSREYIRLLNATPQVSVIADGLDYAEAQEWMKEGDAVGILYLPSDFETRVA EEECCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEECCCCHHHHHH RGNESLFIMYQTTSAFLYYMAMQEASSGAMLALNDRYRPEMLVFLPQQDASKIVSAQPIS CCCCCEEEEEEHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCHHHHHCCCCHH VVGTALYNFTEGYGTYLIPAVLIVIMFQTLLMVIGMISGEERDSGTIVRFASEGLSFGRI HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHH ARVIISKTFVYCVLYTIFALFLLGLIPLLFGLPDIGNYLNTLILLIPFLLATSFFGLAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH YFFTDSEAPLLMIAFFSVGLIFLSGVSYPLELMPWYWQMAHYIIPAAPATLAYVQLNSMG HHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHEEEEEECCCC ASIEQVGVEYVTLWVQCAVYFLLACWVYRRNILKASRALSSL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRTSDNMKGTLADIASLVKDEFKTISTSYAILLVLVGGIFLYGLLYNYMYAPDLVRNAPV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCE VVVDDSKTDLSREYIRLLNATPQVSVIADGLDYAEAQEWMKEGDAVGILYLPSDFETRVA EEECCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEECCCCHHHHHH RGNESLFIMYQTTSAFLYYMAMQEASSGAMLALNDRYRPEMLVFLPQQDASKIVSAQPIS CCCCCEEEEEEHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCHHHHHCCCCHH VVGTALYNFTEGYGTYLIPAVLIVIMFQTLLMVIGMISGEERDSGTIVRFASEGLSFGRI HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHH ARVIISKTFVYCVLYTIFALFLLGLIPLLFGLPDIGNYLNTLILLIPFLLATSFFGLAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH YFFTDSEAPLLMIAFFSVGLIFLSGVSYPLELMPWYWQMAHYIIPAAPATLAYVQLNSMG HHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHEEEEEECCCC ASIEQVGVEYVTLWVQCAVYFLLACWVYRRNILKASRALSSL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA