| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is acrR [C]
Identifier: 150008133
GI number: 150008133
Start: 1749206
End: 1749799
Strand: Reverse
Name: acrR [C]
Synonym: BDI_1498
Alternate gene names: 150008133
Gene position: 1749799-1749206 (Counterclockwise)
Preceding gene: 150008134
Following gene: 150008132
Centisome position: 36.37
GC content: 48.99
Gene sequence:
>594_bases ATGCCGATGACAGTTTCTAAAACACGTGACATGTTGGTGGATGTGGCCAGACAATTGTTTGCCCGCATGGGGGTTGATAA CACGACGATGAACGATATTGCACAGGCATCTCGTAAGGGGAGACGTACGCTTTATACGTACTTTAAAAGCAAGAACGAGA TCTATTTGGCGGTAGTGGAGTCGGAGCTGGACCAGCTTCATAAGATGCTGGTGGACGTGGCCAGCAAGGATCTGCCGGCG GACGAGAAGTTGCTGACGTTTATCTATAGCCGCTTGGACGCTGTAAAGGCGTTGGTATTTCGGAACGGTACGTTGCGAGC TACCTTCTTCCGTGATATATGGCGGGTGGAGAAGGTACGCAAGAGCTTCGACCTTCGGGAAGTGGAGATCATTAAGGGAA TATTGGACGATGGCGTGAAGGAAGGTGTATTCAGCATGCCGGACACGGACATTACCGCCCTCGTGCTCCATCATGCCTTG AAAGGACTGGAGGTGCCCTATATCCGGGGGATCATGGGTGATAATATCAGCCAGCGGATTAAACGTAGAGACAATGTGAT GAATTTAATATTCAACGGAATAAAGATTAAGTAA
Upstream 100 bases:
>100_bases CTTACAAAACAAATTTATTGCAAGTTTTTTTTAATATACTTGGTAGATACGATCTTTTTTAAGTACTTTGCGCACAGTTT TAATCAAAATGTGCAATACA
Downstream 100 bases:
>100_bases ATCAAAGACACTAAGGATGTTTATTAATGCGACAGGGTTTTATGTGCCTGAAGAACGGGTAGATAACCAACATTTTCTTG AATTAAACGGGTTGACGAGT
Product: transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; TetR Family Transcriptional Regulator; Regulatory Protein Tetr
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MPMTVSKTRDMLVDVARQLFARMGVDNTTMNDIAQASRKGRRTLYTYFKSKNEIYLAVVESELDQLHKMLVDVASKDLPA DEKLLTFIYSRLDAVKALVFRNGTLRATFFRDIWRVEKVRKSFDLREVEIIKGILDDGVKEGVFSMPDTDITALVLHHAL KGLEVPYIRGIMGDNISQRIKRRDNVMNLIFNGIKIK
Sequences:
>Translated_197_residues MPMTVSKTRDMLVDVARQLFARMGVDNTTMNDIAQASRKGRRTLYTYFKSKNEIYLAVVESELDQLHKMLVDVASKDLPA DEKLLTFIYSRLDAVKALVFRNGTLRATFFRDIWRVEKVRKSFDLREVEIIKGILDDGVKEGVFSMPDTDITALVLHHAL KGLEVPYIRGIMGDNISQRIKRRDNVMNLIFNGIKIK >Mature_196_residues PMTVSKTRDMLVDVARQLFARMGVDNTTMNDIAQASRKGRRTLYTYFKSKNEIYLAVVESELDQLHKMLVDVASKDLPAD EKLLTFIYSRLDAVKALVFRNGTLRATFFRDIWRVEKVRKSFDLREVEIIKGILDDGVKEGVFSMPDTDITALVLHHALK GLEVPYIRGIMGDNISQRIKRRDNVMNLIFNGIKIK
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22640; Mature: 22509
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMTVSKTRDMLVDVARQLFARMGVDNTTMNDIAQASRKGRRTLYTYFKSKNEIYLAVVE CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCEEEEEHH SELDQLHKMLVDVASKDLPADEKLLTFIYSRLDAVKALVFRNGTLRATFFRDIWRVEKVR HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH KSFDLREVEIIKGILDDGVKEGVFSMPDTDITALVLHHALKGLEVPYIRGIMGDNISQRI HHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHH KRRDNVMNLIFNGIKIK HHHHHHHHHHHCCCCCC >Mature Secondary Structure PMTVSKTRDMLVDVARQLFARMGVDNTTMNDIAQASRKGRRTLYTYFKSKNEIYLAVVE CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCEEEEEHH SELDQLHKMLVDVASKDLPADEKLLTFIYSRLDAVKALVFRNGTLRATFFRDIWRVEKVR HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH KSFDLREVEIIKGILDDGVKEGVFSMPDTDITALVLHHALKGLEVPYIRGIMGDNISQRI HHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHH KRRDNVMNLIFNGIKIK HHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA