Click here to switch to the map view.

The map label for this gene is bepD [H]

Identifier: 150008128

GI number: 150008128

Start: 1745356

End: 1746522

Strand: Reverse

Name: bepD [H]

Synonym: BDI_1493

Alternate gene names: 150008128

Gene position: 1746522-1745356 (Counterclockwise)

Preceding gene: 150008130

Following gene: 150008127

Centisome position: 36.3

GC content: 54.24

Gene sequence:

>1167_bases
ATGAGCAGGAAAAGATTGGCAAAAGTACAGGTTATCTTGATAGCCCTTGTAGTAGCGATGACGGGTTGCCGCCATAAGGA
AGAGCAGCAATTGCCCATCGTGATCGTAGACAAACCCTCAAAAGAAGACGTGCAGATTTATGGCGAGTACGTGGGACGTA
TCCGTGCCGCCAGCTTTGTCGAGGTACATGCCCGTGTGGAGGGATTCCTAGAGAAAATGTTGTTTGAGGAAGGTAAACGG
GTGAAGCAGAATGAGCCCCTGTTTATGATTAATCCCGATAAATATCGTGCTAGAGTAGAGAAAGCGAAAGCCCAACTGAA
GAAAAGCCAAGCCCAAGCGGCCAAGGCCCGGCGTGATGTGGAACGCCTGAAACCGTTGTACGAGCAACACGCCGCCAGCC
AACTGGATTTGGATAACGCCACAGCCGCCCTGGAAGATGCCGAGGCGAATATCGCCATGAGCAAGGCGGATCTAGACCAA
GCGGAGATGGAGCTGAGCTATACGGTGGTGACCTCGCCGCTGTCTGGGTATATCAGTGAGCGTTTCGTGGATGTGGGTGC
TTTGGTGGGCCCGGGGGTCAATTCGAAATTGGCGGCTGTTGTGAAAAGTGACACGGTATTGGTCGATTTTAAGATGACCG
CCTTGGATTACCTGCGTGCCGAGCGTCGTAACGTGAAGTTTGGCGAGCAGGATACGACCCGTTCTTGGCAGCCTACCGTG
ACGGTTACCTTGGCGGACGACTCGGAATACCCGGTAAAAGGTATCGTGGACTTCGCCGACCCGCTGGTGGACCCGAAGAC
CGGTACGTTTGGCGTTCGTGCGGAACTATCCAACCCGAACCAGAAATTATTGCCCGGACAGTTCACGAAGGTGAAGCTCC
TGCTGGATGTCCGCGAGCGTTCGATCGTCGTTCCCCGGAAAGCCCTCTCGATCGAGAAAGGAGGTGCATTCATCTATATC
ATCCGTAGGGACGATATCGCCGAGAAGCGTTTCGTGCAGACCGGCCCGGAGATCGGCAACAAGGTCGTGATCGAACGGGG
CTTGGGCGAGAACGAGCGAGTAGTGGTAGAAGGTTATCATAAATTGGTGCCGGGCGTGAAGGTACATGCGGTAGAGGCCG
GCGACGAGAAGGCTATCCAAGCGCTTAGAGAGGAGGAAGAACAATGA

Upstream 100 bases:

>100_bases
TAAGTGAAGTAATGTTAATTATCGGTCTCCTCGAGAAAAATGGAATGATTCTTTCTTTCTTTACATAACAAATGTGACAT
AAGTAATTTATATAGGTAGA

Downstream 100 bases:

>100_bases
AACCGGGATTCTTTATAGACCGTCCTGTCTTTTCGACCGTCTTATCGATACTGATCGTGATTGTCGGAATCATCGGACTG
GCATTGTTGCCTGTGGACCA

Product: acriflavine resistance protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MSRKRLAKVQVILIALVVAMTGCRHKEEQQLPIVIVDKPSKEDVQIYGEYVGRIRAASFVEVHARVEGFLEKMLFEEGKR
VKQNEPLFMINPDKYRARVEKAKAQLKKSQAQAAKARRDVERLKPLYEQHAASQLDLDNATAALEDAEANIAMSKADLDQ
AEMELSYTVVTSPLSGYISERFVDVGALVGPGVNSKLAAVVKSDTVLVDFKMTALDYLRAERRNVKFGEQDTTRSWQPTV
TVTLADDSEYPVKGIVDFADPLVDPKTGTFGVRAELSNPNQKLLPGQFTKVKLLLDVRERSIVVPRKALSIEKGGAFIYI
IRRDDIAEKRFVQTGPEIGNKVVIERGLGENERVVVEGYHKLVPGVKVHAVEAGDEKAIQALREEEEQ

Sequences:

>Translated_388_residues
MSRKRLAKVQVILIALVVAMTGCRHKEEQQLPIVIVDKPSKEDVQIYGEYVGRIRAASFVEVHARVEGFLEKMLFEEGKR
VKQNEPLFMINPDKYRARVEKAKAQLKKSQAQAAKARRDVERLKPLYEQHAASQLDLDNATAALEDAEANIAMSKADLDQ
AEMELSYTVVTSPLSGYISERFVDVGALVGPGVNSKLAAVVKSDTVLVDFKMTALDYLRAERRNVKFGEQDTTRSWQPTV
TVTLADDSEYPVKGIVDFADPLVDPKTGTFGVRAELSNPNQKLLPGQFTKVKLLLDVRERSIVVPRKALSIEKGGAFIYI
IRRDDIAEKRFVQTGPEIGNKVVIERGLGENERVVVEGYHKLVPGVKVHAVEAGDEKAIQALREEEEQ
>Mature_387_residues
SRKRLAKVQVILIALVVAMTGCRHKEEQQLPIVIVDKPSKEDVQIYGEYVGRIRAASFVEVHARVEGFLEKMLFEEGKRV
KQNEPLFMINPDKYRARVEKAKAQLKKSQAQAAKARRDVERLKPLYEQHAASQLDLDNATAALEDAEANIAMSKADLDQA
EMELSYTVVTSPLSGYISERFVDVGALVGPGVNSKLAAVVKSDTVLVDFKMTALDYLRAERRNVKFGEQDTTRSWQPTVT
VTLADDSEYPVKGIVDFADPLVDPKTGTFGVRAELSNPNQKLLPGQFTKVKLLLDVRERSIVVPRKALSIEKGGAFIYII
RRDDIAEKRFVQTGPEIGNKVVIERGLGENERVVVEGYHKLVPGVKVHAVEAGDEKAIQALREEEEQ

Specific function: Involved in resistance to several unrelated toxic compounds, such as dyes, detergents and antibiotics [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1789929, Length=385, Percent_Identity=31.6883116883117, Blast_Score=181, Evalue=5e-47,
Organism=Escherichia coli, GI1786668, Length=378, Percent_Identity=33.0687830687831, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI1789665, Length=365, Percent_Identity=32.6027397260274, Blast_Score=161, Evalue=6e-41,
Organism=Escherichia coli, GI87082036, Length=327, Percent_Identity=29.0519877675841, Blast_Score=159, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 43280; Mature: 43149

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKRLAKVQVILIALVVAMTGCRHKEEQQLPIVIVDKPSKEDVQIYGEYVGRIRAASFV
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH
EVHARVEGFLEKMLFEEGKRVKQNEPLFMINPDKYRARVEKAKAQLKKSQAQAAKARRDV
HHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERLKPLYEQHAASQLDLDNATAALEDAEANIAMSKADLDQAEMELSYTVVTSPLSGYISE
HHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEECCCCCHHHHEEEEEEEECCHHHHHHH
RFVDVGALVGPGVNSKLAAVVKSDTVLVDFKMTALDYLRAERRNVKFGEQDTTRSWQPTV
HHHHHHHHCCCCCCCHHEEEEECCEEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCEE
TVTLADDSEYPVKGIVDFADPLVDPKTGTFGVRAELSNPNQKLLPGQFTKVKLLLDVRER
EEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECCC
SIVVPRKALSIEKGGAFIYIIRRDDIAEKRFVQTGPEIGNKVVIERGLGENERVVVEGYH
EEECCHHHHEEECCCEEEEEEECCCCHHHHHHHCCCCCCCEEEEECCCCCCCEEEEECHH
KLVPGVKVHAVEAGDEKAIQALREEEEQ
HHCCCCEEEEEECCCHHHHHHHHHHCCC
>Mature Secondary Structure 
SRKRLAKVQVILIALVVAMTGCRHKEEQQLPIVIVDKPSKEDVQIYGEYVGRIRAASFV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH
EVHARVEGFLEKMLFEEGKRVKQNEPLFMINPDKYRARVEKAKAQLKKSQAQAAKARRDV
HHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERLKPLYEQHAASQLDLDNATAALEDAEANIAMSKADLDQAEMELSYTVVTSPLSGYISE
HHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEECCCCCHHHHEEEEEEEECCHHHHHHH
RFVDVGALVGPGVNSKLAAVVKSDTVLVDFKMTALDYLRAERRNVKFGEQDTTRSWQPTV
HHHHHHHHCCCCCCCHHEEEEECCEEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCEE
TVTLADDSEYPVKGIVDFADPLVDPKTGTFGVRAELSNPNQKLLPGQFTKVKLLLDVRER
EEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECCC
SIVVPRKALSIEKGGAFIYIIRRDDIAEKRFVQTGPEIGNKVVIERGLGENERVVVEGYH
EEECCHHHHEEECCCEEEEEEECCCCHHHHHHHCCCCCCCEEEEECCCCCCCEEEEECHH
KLVPGVKVHAVEAGDEKAIQALREEEEQ
HHCCCCEEEEEECCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]