Click here to switch to the map view.

The map label for this gene is recR

Identifier: 150008070

GI number: 150008070

Start: 1664673

End: 1665299

Strand: Reverse

Name: recR

Synonym: BDI_1434

Alternate gene names: 150008070

Gene position: 1665299-1664673 (Counterclockwise)

Preceding gene: 150008079

Following gene: 150008069

Centisome position: 34.61

GC content: 51.04

Gene sequence:

>627_bases
ATGAATCAAAGATATCCTTCAGCCTTGTTGGAAAATGCCGTAAATGAATTGGCTTCCTTGCCGGGGGTGGGGAGGAAGAC
AGCGCTCCGGCTAGCGCTTTATATGTTGCGCCGGGACGTCGGCTATACGGAAAACTTCGCTGCGGCCTTGGTCGCCCTCC
GTCGGGACGTGAAGTACTGCAAGGTCTGCCATAATATATGTGATGATGAGGTTTGCTCTATTTGCGCCAACCCCAGCCGT
GACCATTCCTTGGTTTGCGTGGTAGAGAATATCAAGGAGGTGATGGCGATAGAGAATACCGGGCAATTCCGTGGCGTATA
CCATGTGTTGGGCGGGATCATCTCGCCAATGGATGGCATCGGACCGGGAGACTTGCGTATCGACAGTCTGGTGCGACGTG
TGGCCGAAGGTGAGGTGAAAGAGATCATCTTGGCGTTGAGCACTACCATGGAAGGCGATACGACTAACTTTTTTATTTAC
CGGAAGCTATCCGGTTACGATGTGAGGATCAGTGTCATCGCACGTGGCGTGTCTATCGGTGATGAGATCGAGTATGCCGA
CGAGATCACCTTAGGACGATCCATTATCAATCGTACTGAGTTCAATCTCACCTCTTCTAATTCATAA

Upstream 100 bases:

>100_bases
TGCGACTTGAATGGGATGGGGGAGAAGCCGAGTAAATAATTTGAGGTTTATCGTTAATTCGTAAATTCTTTCTATTTTTG
TAGTCAAATACAGAAAGTAG

Downstream 100 bases:

>100_bases
TCATAACTCATAATTAATATCCGGAATGACCTACGAAGAAACCAAGTTGTCCGTTATCATCGTTAACTATAACGTGAAGT
ATTTTCTGGAGCAATGCCTC

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MNQRYPSALLENAVNELASLPGVGRKTALRLALYMLRRDVGYTENFAAALVALRRDVKYCKVCHNICDDEVCSICANPSR
DHSLVCVVENIKEVMAIENTGQFRGVYHVLGGIISPMDGIGPGDLRIDSLVRRVAEGEVKEIILALSTTMEGDTTNFFIY
RKLSGYDVRISVIARGVSIGDEIEYADEITLGRSIINRTEFNLTSSNS

Sequences:

>Translated_208_residues
MNQRYPSALLENAVNELASLPGVGRKTALRLALYMLRRDVGYTENFAAALVALRRDVKYCKVCHNICDDEVCSICANPSR
DHSLVCVVENIKEVMAIENTGQFRGVYHVLGGIISPMDGIGPGDLRIDSLVRRVAEGEVKEIILALSTTMEGDTTNFFIY
RKLSGYDVRISVIARGVSIGDEIEYADEITLGRSIINRTEFNLTSSNS
>Mature_208_residues
MNQRYPSALLENAVNELASLPGVGRKTALRLALYMLRRDVGYTENFAAALVALRRDVKYCKVCHNICDDEVCSICANPSR
DHSLVCVVENIKEVMAIENTGQFRGVYHVLGGIISPMDGIGPGDLRIDSLVRRVAEGEVKEIILALSTTMEGDTTNFFIY
RKLSGYDVRISVIARGVSIGDEIEYADEITLGRSIINRTEFNLTSSNS

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=193, Percent_Identity=43.0051813471503, Blast_Score=158, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_PARD8 (A6LBX7)

Other databases:

- EMBL:   CP000140
- RefSeq:   YP_001302813.1
- ProteinModelPortal:   A6LBX7
- SMR:   A6LBX7
- STRING:   A6LBX7
- GeneID:   5306587
- GenomeReviews:   CP000140_GR
- KEGG:   pdi:BDI_1434
- eggNOG:   COG0353
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- BioCyc:   PDIS435591:BDI_1434-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 22966; Mature: 22966

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQRYPSALLENAVNELASLPGVGRKTALRLALYMLRRDVGYTENFAAALVALRRDVKYC
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KVCHNICDDEVCSICANPSRDHSLVCVVENIKEVMAIENTGQFRGVYHVLGGIISPMDGI
HHHHHCCCHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC
GPGDLRIDSLVRRVAEGEVKEIILALSTTMEGDTTNFFIYRKLSGYDVRISVIARGVSIG
CCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCCCCC
DEIEYADEITLGRSIINRTEFNLTSSNS
CCHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNQRYPSALLENAVNELASLPGVGRKTALRLALYMLRRDVGYTENFAAALVALRRDVKYC
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KVCHNICDDEVCSICANPSRDHSLVCVVENIKEVMAIENTGQFRGVYHVLGGIISPMDGI
HHHHHCCCHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC
GPGDLRIDSLVRRVAEGEVKEIILALSTTMEGDTTNFFIYRKLSGYDVRISVIARGVSIG
CCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCCCCC
DEIEYADEITLGRSIINRTEFNLTSSNS
CCHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA