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The map label for this gene is araC [C]

Identifier: 150008065

GI number: 150008065

Start: 1659662

End: 1660564

Strand: Reverse

Name: araC [C]

Synonym: BDI_1428

Alternate gene names: 150008065

Gene position: 1660564-1659662 (Counterclockwise)

Preceding gene: 150008068

Following gene: 150008062

Centisome position: 34.51

GC content: 46.95

Gene sequence:

>903_bases
ATGGAGAATCTAATAAAGATCGATACCGTCGATCAATACAACAAGATGTTTGGCTTGGAGACGTTGCACCCTTTGGTGAG
CGTGGTAGATTTATCCAAGTCCGAGACATGGCCTACTAATTTCCGGGTTAATTATGGTATATACGGACTTTTCCTGAAAG
ATACGAAGTGCGGGGATATCCGGTACGGGAGGCAATATTATGATTATCAAGAAGGAACCGTAGTAGGATTCGCTCCTGGG
CAGGTGACGGGTATTGAGCTTAAGGATGGGACCCGGCCTTTGGCGCATGGGTTGCTTTTCCATCCGGACTTGATCCGTGG
TACGGCTTTGGGACGGGACATCAAGCGTTATTCTTTCTTCTCCTATGAATCGAACGAGGCGTTACATCTCTCTGAGGAAG
AGAAGGGGATCTTCGTGGATTGCCTGAGGAAAATCCAGATCGAGTTGGAGCACTCCATCGACAAGCATAGCAAACGGCTG
ATCGCGATGAATATCGAGTTGCTGCTCGATTATTGCCTGCGTTTTTATGATCGTCAGTTTACGACCCGTGCGGAGACGAA
TAAGGATGTGTTGGTGAGGTTCGAACGATTGCTGGATGAATACCTGCAAAGCGATCTGTTAAGACAGGAAGGGCTACCTA
CTGTACGGTATTTCGCCGAGAAGATTTGTTTGTCCCCGAACTATTTCGGTGATCTGATCAAGAAAGAGACAGGGAAAACT
GCCCAAGAAAATATACAAGACCGGATTATTTCCTTAGCGAAAGAATGGATAGTAGGGACAAACAAGACCGTCAGCCAAAT
CGCTTACGACCTAGGATTCCAATACTCCCAGCATTTCAGCCGCATATTCAAGAAGACCGTGGGGTGTACCCCGAATGAAT
ATCGGAAATCCCAGATGTCGTAA

Upstream 100 bases:

>100_bases
TATTTTTCAATACGATATCATCCGGTTTGGTGGATTTTATCTGATGGCATGAGGCTGTTAGATTTGGAATGTTTATCTTT
GCGATAAAACAGATAGCCTT

Downstream 100 bases:

>100_bases
TCGGTGTTACGGGTTATTGGATGTATTTTATGACCTTGGCGGGAACACCTCCCACGATGGCATTGTCCGGTACATCTTTA
GTAACTACCGAGCCGGCTCC

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; AraC Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator Arac Family; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcriptional Regulator AraC Family Protein; Transcription Regulator; Bacterial Regulatory Helix-Turn-Helix Protein; Two-Component Response Regulator; Transcriptional Regulator AraC Type; Two Component Transcriptional Regulator AraC Family

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MENLIKIDTVDQYNKMFGLETLHPLVSVVDLSKSETWPTNFRVNYGIYGLFLKDTKCGDIRYGRQYYDYQEGTVVGFAPG
QVTGIELKDGTRPLAHGLLFHPDLIRGTALGRDIKRYSFFSYESNEALHLSEEEKGIFVDCLRKIQIELEHSIDKHSKRL
IAMNIELLLDYCLRFYDRQFTTRAETNKDVLVRFERLLDEYLQSDLLRQEGLPTVRYFAEKICLSPNYFGDLIKKETGKT
AQENIQDRIISLAKEWIVGTNKTVSQIAYDLGFQYSQHFSRIFKKTVGCTPNEYRKSQMS

Sequences:

>Translated_300_residues
MENLIKIDTVDQYNKMFGLETLHPLVSVVDLSKSETWPTNFRVNYGIYGLFLKDTKCGDIRYGRQYYDYQEGTVVGFAPG
QVTGIELKDGTRPLAHGLLFHPDLIRGTALGRDIKRYSFFSYESNEALHLSEEEKGIFVDCLRKIQIELEHSIDKHSKRL
IAMNIELLLDYCLRFYDRQFTTRAETNKDVLVRFERLLDEYLQSDLLRQEGLPTVRYFAEKICLSPNYFGDLIKKETGKT
AQENIQDRIISLAKEWIVGTNKTVSQIAYDLGFQYSQHFSRIFKKTVGCTPNEYRKSQMS
>Mature_300_residues
MENLIKIDTVDQYNKMFGLETLHPLVSVVDLSKSETWPTNFRVNYGIYGLFLKDTKCGDIRYGRQYYDYQEGTVVGFAPG
QVTGIELKDGTRPLAHGLLFHPDLIRGTALGRDIKRYSFFSYESNEALHLSEEEKGIFVDCLRKIQIELEHSIDKHSKRL
IAMNIELLLDYCLRFYDRQFTTRAETNKDVLVRFERLLDEYLQSDLLRQEGLPTVRYFAEKICLSPNYFGDLIKKETGKT
AQENIQDRIISLAKEWIVGTNKTVSQIAYDLGFQYSQHFSRIFKKTVGCTPNEYRKSQMS

Specific function: This Protein Controls The Expression Of At Least Six Genes That Are Involved In The Transport And Catabolism Of L-Arabinose. It Regulates Initiation Of Transcription Of The Arabad Operon And It Also Controls Its Own Synthesis. The L- Arabinose Operon Dis

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34883; Mature: 34883

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENLIKIDTVDQYNKMFGLETLHPLVSVVDLSKSETWPTNFRVNYGIYGLFLKDTKCGDI
CCCCEEECCHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCCCCC
RYGRQYYDYQEGTVVGFAPGQVTGIELKDGTRPLAHGLLFHPDLIRGTALGRDIKRYSFF
CCCHHHHCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHCCHHHHHEEE
SYESNEALHLSEEEKGIFVDCLRKIQIELEHSIDKHSKRLIAMNIELLLDYCLRFYDRQF
CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHH
TTRAETNKDVLVRFERLLDEYLQSDLLRQEGLPTVRYFAEKICLSPNYFGDLIKKETGKT
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCH
AQENIQDRIISLAKEWIVGTNKTVSQIAYDLGFQYSQHFSRIFKKTVGCTPNEYRKSQMS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHCCCC
>Mature Secondary Structure
MENLIKIDTVDQYNKMFGLETLHPLVSVVDLSKSETWPTNFRVNYGIYGLFLKDTKCGDI
CCCCEEECCHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCCCCC
RYGRQYYDYQEGTVVGFAPGQVTGIELKDGTRPLAHGLLFHPDLIRGTALGRDIKRYSFF
CCCHHHHCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHCCHHHHHEEE
SYESNEALHLSEEEKGIFVDCLRKIQIELEHSIDKHSKRLIAMNIELLLDYCLRFYDRQF
CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHH
TTRAETNKDVLVRFERLLDEYLQSDLLRQEGLPTVRYFAEKICLSPNYFGDLIKKETGKT
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCH
AQENIQDRIISLAKEWIVGTNKTVSQIAYDLGFQYSQHFSRIFKKTVGCTPNEYRKSQMS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA