| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008050
Identifier: 150008050
GI number: 150008050
Start: 1640668
End: 1641627
Strand: Reverse
Name: 150008050
Synonym: BDI_1413
Alternate gene names: NA
Gene position: 1641627-1640668 (Counterclockwise)
Preceding gene: 150008051
Following gene: 150008049
Centisome position: 34.12
GC content: 28.54
Gene sequence:
>960_bases ATGTTATCTGATAAGCAAAAAAAACATATTTTGGTTAATCGTGATGGTTTGAAGTATTATACTGTTGAAGGGTTGGAAAA AGTACACGAAGAAATGCTACGTCTATTATTGATAATAGATACTATTGCAAAAGAAAATAATATTCCCTATTGGATAGATG GGGGTAGTTTGATTGGTATAGTACGTCATAAAGGATTTATTCCATGGGATGATGATCTGGATATTTCTCTGCTAAAAAAG GATTACCTTAGGTTAATTAAAGAAATATCAATGTATTGTGAAATGCACAATGATGTTGCACTGTTCTATAACGAGCCATT AGTAGAACATACTTGTAACTTTTTTGCCAGTAAAAAAGTATTTTCTCGTACTCAGGGTTCTTGTGTTCTTGTTCCTGTTA AAATAGATATTAGACCTGTTAATTGTATAGTTAAAAATAAAGATAATGTAATAGAAAATAATATTTATAGAGATACTGCA AATTATATCATATTTGGTAAATCTTATGGTTATATGAAAAAAACTTTAAGCCATAAAAATGAACAAATGGATTTTTTAGA ATACTATAATTATAAATATGGGTTAGTAGATTCTGGATTAGAAAATGTTATAATGGTTCATCCTTATTTTGAATTTTCTA ATACATTTGAGCTTACCTATAATGATTTGTTTCCATTAAAAATGCTGCAATTTGAGAATATGTTGTTGCCGGTTCCGAAT AATTATGATTATTTGCTAAAAGAGTTGTATGGAGATTATATGAGTTACCCAAATATTTGCCATAGAGCACCTGTAGCATG TCAAATTTATCAAAGGCAATTGAAAGATAATCGTTTTAACTTGTGCTTGTCGATGTTTAAACATACTAACAGAGGATTGT TGTACAGGATGCGTATTATATTAGTGCAGATAAGATTGTTGGGAGTGTTTGAATATATGAAAATAAAAATTTATGAGTAA
Upstream 100 bases:
>100_bases TCTTTATACAATGGCATTGGCTTTTGTTGCACCCGAATTATTTGTTGCGTTGTATAGGATTTGTATCGTTAAATATAAAA ATATATTAAATTGATGGCGT
Downstream 100 bases:
>100_bases TCGTGATAAAATTTTGAGTTATAGGGATTTGATAAAGAAAAAGCTGATTCCTTTAATAAATGCTGATTATGTATTGTTGG ATGTACCCAACCATCCTAAT
Product: putative cholinephosphotransferase
Products: NA
Alternate protein names: Cholinephosphotransferase
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MLSDKQKKHILVNRDGLKYYTVEGLEKVHEEMLRLLLIIDTIAKENNIPYWIDGGSLIGIVRHKGFIPWDDDLDISLLKK DYLRLIKEISMYCEMHNDVALFYNEPLVEHTCNFFASKKVFSRTQGSCVLVPVKIDIRPVNCIVKNKDNVIENNIYRDTA NYIIFGKSYGYMKKTLSHKNEQMDFLEYYNYKYGLVDSGLENVIMVHPYFEFSNTFELTYNDLFPLKMLQFENMLLPVPN NYDYLLKELYGDYMSYPNICHRAPVACQIYQRQLKDNRFNLCLSMFKHTNRGLLYRMRIILVQIRLLGVFEYMKIKIYE
Sequences:
>Translated_319_residues MLSDKQKKHILVNRDGLKYYTVEGLEKVHEEMLRLLLIIDTIAKENNIPYWIDGGSLIGIVRHKGFIPWDDDLDISLLKK DYLRLIKEISMYCEMHNDVALFYNEPLVEHTCNFFASKKVFSRTQGSCVLVPVKIDIRPVNCIVKNKDNVIENNIYRDTA NYIIFGKSYGYMKKTLSHKNEQMDFLEYYNYKYGLVDSGLENVIMVHPYFEFSNTFELTYNDLFPLKMLQFENMLLPVPN NYDYLLKELYGDYMSYPNICHRAPVACQIYQRQLKDNRFNLCLSMFKHTNRGLLYRMRIILVQIRLLGVFEYMKIKIYE >Mature_319_residues MLSDKQKKHILVNRDGLKYYTVEGLEKVHEEMLRLLLIIDTIAKENNIPYWIDGGSLIGIVRHKGFIPWDDDLDISLLKK DYLRLIKEISMYCEMHNDVALFYNEPLVEHTCNFFASKKVFSRTQGSCVLVPVKIDIRPVNCIVKNKDNVIENNIYRDTA NYIIFGKSYGYMKKTLSHKNEQMDFLEYYNYKYGLVDSGLENVIMVHPYFEFSNTFELTYNDLFPLKMLQFENMLLPVPN NYDYLLKELYGDYMSYPNICHRAPVACQIYQRQLKDNRFNLCLSMFKHTNRGLLYRMRIILVQIRLLGVFEYMKIKIYE
Specific function: Unknown
COG id: COG3475
COG function: function code M; LPS biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37936; Mature: 37936
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSDKQKKHILVNRDGLKYYTVEGLEKVHEEMLRLLLIIDTIAKENNIPYWIDGGSLIGI CCCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEE VRHKGFIPWDDDLDISLLKKDYLRLIKEISMYCEMHNDVALFYNEPLVEHTCNFFASKKV EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHH FSRTQGSCVLVPVKIDIRPVNCIVKNKDNVIENNIYRDTANYIIFGKSYGYMKKTLSHKN HHCCCCCEEEEEEEEEEEEEEEEEECCCCCHHCCCEECCCCEEEEECCCHHHHHHHHCCC EQMDFLEYYNYKYGLVDSGLENVIMVHPYFEFSNTFELTYNDLFPLKMLQFENMLLPVPN CCHHHHHHCCCEECCCCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHCCEEEECCC NYDYLLKELYGDYMSYPNICHRAPVACQIYQRQLKDNRFNLCLSMFKHTNRGLLYRMRII CHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH LVQIRLLGVFEYMKIKIYE HHHHHHHHHEEEEEEEEEC >Mature Secondary Structure MLSDKQKKHILVNRDGLKYYTVEGLEKVHEEMLRLLLIIDTIAKENNIPYWIDGGSLIGI CCCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEE VRHKGFIPWDDDLDISLLKKDYLRLIKEISMYCEMHNDVALFYNEPLVEHTCNFFASKKV EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHH FSRTQGSCVLVPVKIDIRPVNCIVKNKDNVIENNIYRDTANYIIFGKSYGYMKKTLSHKN HHCCCCCEEEEEEEEEEEEEEEEEECCCCCHHCCCEECCCCEEEEECCCHHHHHHHHCCC EQMDFLEYYNYKYGLVDSGLENVIMVHPYFEFSNTFELTYNDLFPLKMLQFENMLLPVPN CCHHHHHHCCCEECCCCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHCCEEEECCC NYDYLLKELYGDYMSYPNICHRAPVACQIYQRQLKDNRFNLCLSMFKHTNRGLLYRMRII CHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH LVQIRLLGVFEYMKIKIYE HHHHHHHHHEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA