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The map label for this gene is yibD [C]

Identifier: 150008048

GI number: 150008048

Start: 1638678

End: 1639655

Strand: Reverse

Name: yibD [C]

Synonym: BDI_1411

Alternate gene names: 150008048

Gene position: 1639655-1638678 (Counterclockwise)

Preceding gene: 150008049

Following gene: 150008047

Centisome position: 34.08

GC content: 31.19

Gene sequence:

>978_bases
ATGAAAGTTACAATTTTACTACCTGCATATAATGCGGCACTTTATCTTAGAGACTCTTTAGATAGCATTATGCGACAAGC
ATTTAAAGATTTTGATGTGCTGTTGATTGATGATGGATCTATGGATGATACCTCAAAAATCGCAATTGAGTATAGTAATA
TTGATAGGCGTATAAAGTATTATAAGAATGAGAAAAATATTGGTCTAATCAAGACGCTTAATAAAGGATTATCGCTTGCT
AAAGGTGAATATATCGTTAGAATGGATGCTGATGATATAATGTTTGATGATAGGCTTTACAAACAAGTAAAATATATGGA
TTCAAATCCTGAATGCTTTGTATGCGGAGGGCAAATGGAGTATATAGGAGGCTTGACTGGAATGGCTCCTATTTTGCCTC
AAAAATATGAAGATTTACTTTATTTATCTTTGATAAACTGTCCTTTGTATCATCCTACAACTATTATTAGGAACAGTGCG
ATTAAGCAGTTTGGATTGAAATACAATGACTCATATAAACATGCGGAAGATTATAAGTTTTGGAGTGATATAATTTTTTC
ACATCCTAACTCTATTGCCAATATCAAAGATGTTGTATTGTTTTATCGTATTTCGAACAACCAAATAACCGCAAAATATA
GTGATGAACAAGATTTAATATCAAAAATAGTGAGAAGAGAAAATGTTCAGCATGTTTTAGTGCCATATGGTATAAAGTTG
CCGGAAGTAGTGAACTGTGAAATAATTGAAAAGGTATCTTCGCTTATAAGAAAGGAGCATATTGATGCAGCTGAAATTCT
GACATTGGTACTATGTATGCTGTATATGTCTATGGAAAATTCTTATGTTAGAATAAAGCATTTTATACTGTCGAATGATT
ATTCTTTATTTGTTAAAAATTCTTCGAGAATCAAATTGGGATTGTCTGTTTTGTTAAGTGGAATTTTCTCTAATAGAGGG
AAAAGATTTGTGATTTAA

Upstream 100 bases:

>100_bases
TGATACATGGCTCCGTGAGTTTGATAATATAGAATTGATGAGCTAATTTTTTTCTGTTATAGACATCATTGCGAAATCTT
ATCTGCAAACATAACAATAA

Downstream 100 bases:

>100_bases
ATCTTATAGTATTCGATTCATTATGCCTAAAGTTAGGTGCTATCAAAATATACTGATTATATTTTGCTTCTTTGTTTATT
TCTTTCCATTTAAAGCTTAC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MKVTILLPAYNAALYLRDSLDSIMRQAFKDFDVLLIDDGSMDDTSKIAIEYSNIDRRIKYYKNEKNIGLIKTLNKGLSLA
KGEYIVRMDADDIMFDDRLYKQVKYMDSNPECFVCGGQMEYIGGLTGMAPILPQKYEDLLYLSLINCPLYHPTTIIRNSA
IKQFGLKYNDSYKHAEDYKFWSDIIFSHPNSIANIKDVVLFYRISNNQITAKYSDEQDLISKIVRRENVQHVLVPYGIKL
PEVVNCEIIEKVSSLIRKEHIDAAEILTLVLCMLYMSMENSYVRIKHFILSNDYSLFVKNSSRIKLGLSVLLSGIFSNRG
KRFVI

Sequences:

>Translated_325_residues
MKVTILLPAYNAALYLRDSLDSIMRQAFKDFDVLLIDDGSMDDTSKIAIEYSNIDRRIKYYKNEKNIGLIKTLNKGLSLA
KGEYIVRMDADDIMFDDRLYKQVKYMDSNPECFVCGGQMEYIGGLTGMAPILPQKYEDLLYLSLINCPLYHPTTIIRNSA
IKQFGLKYNDSYKHAEDYKFWSDIIFSHPNSIANIKDVVLFYRISNNQITAKYSDEQDLISKIVRRENVQHVLVPYGIKL
PEVVNCEIIEKVSSLIRKEHIDAAEILTLVLCMLYMSMENSYVRIKHFILSNDYSLFVKNSSRIKLGLSVLLSGIFSNRG
KRFVI
>Mature_325_residues
MKVTILLPAYNAALYLRDSLDSIMRQAFKDFDVLLIDDGSMDDTSKIAIEYSNIDRRIKYYKNEKNIGLIKTLNKGLSLA
KGEYIVRMDADDIMFDDRLYKQVKYMDSNPECFVCGGQMEYIGGLTGMAPILPQKYEDLLYLSLINCPLYHPTTIIRNSA
IKQFGLKYNDSYKHAEDYKFWSDIIFSHPNSIANIKDVVLFYRISNNQITAKYSDEQDLISKIVRRENVQHVLVPYGIKL
PEVVNCEIIEKVSSLIRKEHIDAAEILTLVLCMLYMSMENSYVRIKHFILSNDYSLFVKNSSRIKLGLSVLLSGIFSNRG
KRFVI

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 37492; Mature: 37492

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVTILLPAYNAALYLRDSLDSIMRQAFKDFDVLLIDDGSMDDTSKIAIEYSNIDRRIKY
CEEEEEEECCCEEEEEHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCHHHHH
YKNEKNIGLIKTLNKGLSLAKGEYIVRMDADDIMFDDRLYKQVKYMDSNPECFVCGGQME
CCCCCCCCHHHHHHHCCCCCCCCEEEEECCCHHEEHHHHHHHHHHCCCCCCEEEECCCCH
YIGGLTGMAPILPQKYEDLLYLSLINCPLYHPTTIIRNSAIKQFGLKYNDSYKHAEDYKF
HHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHH
WSDIIFSHPNSIANIKDVVLFYRISNNQITAKYSDEQDLISKIVRRENVQHVLVPYGIKL
HHHHHHCCCCCCCCCEEEEEEEEECCCEEEEEECCHHHHHHHHHHHCCCCEEEEECCCCC
PEVVNCEIIEKVSSLIRKEHIDAAEILTLVLCMLYMSMENSYVRIKHFILSNDYSLFVKN
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEC
SSRIKLGLSVLLSGIFSNRGKRFVI
CCCEEHHHHHHHHHHHHCCCCEECC
>Mature Secondary Structure
MKVTILLPAYNAALYLRDSLDSIMRQAFKDFDVLLIDDGSMDDTSKIAIEYSNIDRRIKY
CEEEEEEECCCEEEEEHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCHHHHH
YKNEKNIGLIKTLNKGLSLAKGEYIVRMDADDIMFDDRLYKQVKYMDSNPECFVCGGQME
CCCCCCCCHHHHHHHCCCCCCCCEEEEECCCHHEEHHHHHHHHHHCCCCCCEEEECCCCH
YIGGLTGMAPILPQKYEDLLYLSLINCPLYHPTTIIRNSAIKQFGLKYNDSYKHAEDYKF
HHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHH
WSDIIFSHPNSIANIKDVVLFYRISNNQITAKYSDEQDLISKIVRRENVQHVLVPYGIKL
HHHHHHCCCCCCCCCEEEEEEEEECCCEEEEEECCHHHHHHHHHHHCCCCEEEEECCCCC
PEVVNCEIIEKVSSLIRKEHIDAAEILTLVLCMLYMSMENSYVRIKHFILSNDYSLFVKN
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEC
SSRIKLGLSVLLSGIFSNRGKRFVI
CCCEEHHHHHHHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]