| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150006212
Identifier: 150006212
GI number: 150006212
Start: 4600531
End: 4601616
Strand: Direct
Name: 150006212
Synonym: BVU_3723
Alternate gene names: NA
Gene position: 4600531-4601616 (Clockwise)
Preceding gene: 150006211
Following gene: 150006213
Centisome position: 89.1
GC content: 36.65
Gene sequence:
>1086_bases ATGAGACAACAAACATGTACTACTGTAACATTAAGACAACGCCCTATAAGAAACGGACGAATCTCTCTTTACTTGGACTA CTACCCTGCTGTACGTAATCCTAAAACAATGAAACTGAGCAGACGTGAATATTTAGGATTTTACATTTATGCAACCCCCA AGAATGCAATTGAGCTAGATTACAATAATGAAATCCTAGCTAAAGCCGAACTTATCAGATGCCGTCGACAAGAGGCTGTA ATCAATGAAGAATTTGGATTTATGGACAGACACAAAATGAGAGCCGATTTTATGGCATATTTCAAAGAAGTATGCCGTAA AAAAGATCATAAATGGCATATCGTTTATCTGCACTTTGAGAAATTTGTCAATGGCAAATGTATGTTTGGAGAAATCACTG TTGACCTATGTAACCGCTTCCGAGACTATCTTCTCCATGCAAGGCAACTAAAACATACAGATAAAATGGTTTCCCGTAAT TCAGCTGCCAGTTATTTCTCATTATTCCGAGGAGTTTTGAAACTTGCATATAGAGATAAATATTTACGTGAAAATCCCAA TGATTTTCTTGAAAAGATAGAGAGTAGGGATATTCATAAAGAGTTTTTAACACAAGATGAATTAAAGACTCTGGCTTCAA CTCCATGCGATATACCTGTATTAAGAAATGCATCCCTTTTCTCATGTCTTACCGGATTACGCATCAGTGATATATTGAAT CTTAAGTGGGAAAACTTATGCACAGCTCCCGATCTGGGACATTGTATTCGTCTTCGTACGCAAAAGACACAGACAGAAGC CCTACTACCTATCAGTTATGAAGCATACGCACTTTGTGGAGAACCGGGCACAGGTAAAGTGTTTAAAGAACTGCGACGTT GCATGACTGGATATCCTCTTAAAGCATGGATAAAAAAAGCAGGTATTCAAAAACATATAACATTCCACTGCTTGAGTCAC AGTAAACTCTTTTATTTATTGAATATCAGCGAGTTGAGTATTTTAAAGAATGTGACTGCTAACGATTTAGAAACGAGCTA TATTCTTTTTCTTTCACAACTTTGCAATATACAAAGAACGCTTTGA
Upstream 100 bases:
>100_bases TAACTTTAAAATAACCACATCACCAGGAATACACTTGTTTATTTTGCTATCACCACAATAAGAATTAAACCTGAATATAA ATTTTAATACATTATATTTT
Downstream 100 bases:
>100_bases TTTCGAGTGCAAAGTTAAATCTAATTTCTGAAAAACAACATTTTATGCTGTGATTTTACAAAATATTAAGATTAGTCTTT GCAAAGGTAAAAGAGTAGTT
Product: integrase
Products: NA
Alternate protein names: Integrase; Phage Integrase Family Protein; Integrase Family Protein; Site-Specific Recombinase; Bacteriophage Integrase; Site-Specific Recombinase Phage Integrase Family; Mobilizable Transposon; Mobilizable Transposon Int Protein; Mobilizable Transposon Protein Int Protein; Phage Integrase Family Site Specific Recombinase
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MRQQTCTTVTLRQRPIRNGRISLYLDYYPAVRNPKTMKLSRREYLGFYIYATPKNAIELDYNNEILAKAELIRCRRQEAV INEEFGFMDRHKMRADFMAYFKEVCRKKDHKWHIVYLHFEKFVNGKCMFGEITVDLCNRFRDYLLHARQLKHTDKMVSRN SAASYFSLFRGVLKLAYRDKYLRENPNDFLEKIESRDIHKEFLTQDELKTLASTPCDIPVLRNASLFSCLTGLRISDILN LKWENLCTAPDLGHCIRLRTQKTQTEALLPISYEAYALCGEPGTGKVFKELRRCMTGYPLKAWIKKAGIQKHITFHCLSH SKLFYLLNISELSILKNVTANDLETSYILFLSQLCNIQRTL
Sequences:
>Translated_361_residues MRQQTCTTVTLRQRPIRNGRISLYLDYYPAVRNPKTMKLSRREYLGFYIYATPKNAIELDYNNEILAKAELIRCRRQEAV INEEFGFMDRHKMRADFMAYFKEVCRKKDHKWHIVYLHFEKFVNGKCMFGEITVDLCNRFRDYLLHARQLKHTDKMVSRN SAASYFSLFRGVLKLAYRDKYLRENPNDFLEKIESRDIHKEFLTQDELKTLASTPCDIPVLRNASLFSCLTGLRISDILN LKWENLCTAPDLGHCIRLRTQKTQTEALLPISYEAYALCGEPGTGKVFKELRRCMTGYPLKAWIKKAGIQKHITFHCLSH SKLFYLLNISELSILKNVTANDLETSYILFLSQLCNIQRTL >Mature_361_residues MRQQTCTTVTLRQRPIRNGRISLYLDYYPAVRNPKTMKLSRREYLGFYIYATPKNAIELDYNNEILAKAELIRCRRQEAV INEEFGFMDRHKMRADFMAYFKEVCRKKDHKWHIVYLHFEKFVNGKCMFGEITVDLCNRFRDYLLHARQLKHTDKMVSRN SAASYFSLFRGVLKLAYRDKYLRENPNDFLEKIESRDIHKEFLTQDELKTLASTPCDIPVLRNASLFSCLTGLRISDILN LKWENLCTAPDLGHCIRLRTQKTQTEALLPISYEAYALCGEPGTGKVFKELRRCMTGYPLKAWIKKAGIQKHITFHCLSH SKLFYLLNISELSILKNVTANDLETSYILFLSQLCNIQRTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42418; Mature: 42418
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQQTCTTVTLRQRPIRNGRISLYLDYYPAVRNPKTMKLSRREYLGFYIYATPKNAIELD CCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCEEECHHCEEEEEEEECCCCCEEEC YNNEILAKAELIRCRRQEAVINEEFGFMDRHKMRADFMAYFKEVCRKKDHKWHIVYLHFE CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE KFVNGKCMFGEITVDLCNRFRDYLLHARQLKHTDKMVSRNSAASYFSLFRGVLKLAYRDK HHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH YLRENPNDFLEKIESRDIHKEFLTQDELKTLASTPCDIPVLRNASLFSCLTGLRISDILN HHHCCHHHHHHHHHHCHHHHHHHCHHHHHHHHCCCCCCCEECCCHHHHHHHCCHHHHHHC LKWENLCTAPDLGHCIRLRTQKTQTEALLPISYEAYALCGEPGTGKVFKELRRCMTGYPL CCHHCCCCCCCCCHHEEECCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHCCCCH KAWIKKAGIQKHITFHCLSHSKLFYLLNISELSILKNVTANDLETSYILFLSQLCNIQRT HHHHHHCCCHHEEEEEEECCCCEEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC L C >Mature Secondary Structure MRQQTCTTVTLRQRPIRNGRISLYLDYYPAVRNPKTMKLSRREYLGFYIYATPKNAIELD CCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCEEECHHCEEEEEEEECCCCCEEEC YNNEILAKAELIRCRRQEAVINEEFGFMDRHKMRADFMAYFKEVCRKKDHKWHIVYLHFE CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE KFVNGKCMFGEITVDLCNRFRDYLLHARQLKHTDKMVSRNSAASYFSLFRGVLKLAYRDK HHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH YLRENPNDFLEKIESRDIHKEFLTQDELKTLASTPCDIPVLRNASLFSCLTGLRISDILN HHHCCHHHHHHHHHHCHHHHHHHCHHHHHHHHCCCCCCCEECCCHHHHHHHCCHHHHHHC LKWENLCTAPDLGHCIRLRTQKTQTEALLPISYEAYALCGEPGTGKVFKELRRCMTGYPL CCHHCCCCCCCCCHHEEECCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHCCCCH KAWIKKAGIQKHITFHCLSHSKLFYLLNISELSILKNVTANDLETSYILFLSQLCNIQRT HHHHHHCCCHHEEEEEEECCCCEEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA