| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150006205
Identifier: 150006205
GI number: 150006205
Start: 4592948
End: 4594552
Strand: Direct
Name: 150006205
Synonym: BVU_3716
Alternate gene names: NA
Gene position: 4592948-4594552 (Clockwise)
Preceding gene: 150006204
Following gene: 150006206
Centisome position: 88.96
GC content: 54.7
Gene sequence:
>1605_bases ATGGAACATTACATTTTTTATTGCAAGCTGTCGCTTCTGGCAGTCCTGTCACTGATAACGGCCTGCTGCATGCTGAGCCG GAGATGGTATGTCAACCTGGCCGCATTTCTTGCATGCCTCTCGGGCGAGACCTTTCTGGCCCACCTGTTCTTCCCCGGAT ACATGCTGTGTCCGGCGGCCGCCTCGTTCATAATCCTCTTCCTTTCCCGGATATGGGACCTGTCCAGAACCCCGGCAAAG GGGAACGGAGCTGATCCCATCCGGCTGCCGGTCAGGTCAGGAATCCGGGAGTCCCGGCTCGAATTCCATTACCACTACTC CAACTTCCTGGTTTACGGAGAGGCCGGTTCCGGAAAGACGAAAAGTATCGGAAAATGGCTTCTGAGCGAATACATGCGGC TGGGATTCGCCGGATTCATCTATGACTTCAAGGATACGGACTATACCCGTACCGCCTACAATCTCATTAAAAGGCACAGG TATCCGCACAAGTTCTACTATGTCAGTTTCGACAGGCCTGAACGGTCGTACCGGTTCAACCCGCTCAAGGTGGTGAGGGA CCGCACGGAACTGATCCAGCTGATGGAGGACGTGCTGCTCGCGCTGCTTCCCAAGAAGGAACAGCAGAACGAATGGGTCG CCGGAGGTCTGGGCATCCTCCGCGGCGTGGCGTTCCGGTTCTGGGACGAGTTCCCCGAGCATTGCACACTGCCGCATATA CTGGCCTTCATCATGACCGCCTCGGCAAGGCAGCTCTCCCTGTTCCTGCAGCAGAACCTCGTGTCGGAAATGCTGGCCGG CGCCTATCTGAAGGCGGAAGGTTCCGAGAAGACCCAGGCATCCTATCTCTCCACGCTCTGCAACAATCTGGCGACCATAT CTCAGAACGAGGAGATCGCCTATGTCCTTTCAGGGGATGACTTTGATTTCAACCTGATCGATCCGGAGACCCCCAAGCTG TTCGCCGTCAGCAACAACTTTTCCAAGAATTCGGTCTATGCCCCGGTCATCAGCATGCTCATGACCATATCCGCCAGGCA GTTCTCCATGCAGAACAGGGTTCCCTTCGTCTATTTCCTTGATGAGATGACCACGGTGAACATCAAGAACTTCGAGACGC TGCCTTCAGTCCTGCGTGAGTATAAGGCGGCATTCATATTGCTGACCCAGTCCGGCGCCAAACTGGAGAACCTGTACGGG AAACTGGACCGTTCTTCCGTAGAAGCCAATTTCGGAAATATGTTCCTGGGAAGGACGAAAGATGTGGAAGCCCTGAAGTA TTACCCCTTATTCTTCGGCAAGGAAGAAAAGGAAAGACGCTCACGAAGTTCCGGAAAATCAGGCGCATCGTCCAGCAGCA GCGTGACCGTTTCTTCCCAAAAGGAGGACATCTACCAGGGAAAGGATTTTGCCGATCTAGAACCGGGAGAATTTATCGGC TCCGCCACGCGTGCCAACGTCAGCTACTTCAAGGTAAAGCTGGAGATGTATGACGACAGGAACGAGGAGCCCCTGCCCGA TGTTCGGGTCCTTGAGCCGGGAGAGCTGGGCAGGAACTTCGCAAGGATTCTTGAGGAGGTACGGGAGCTGTTCCCGTGTG AATGA
Upstream 100 bases:
>100_bases AAGGAACACTCCTTCCAGGCGGAAATGCAGTAATTGGGCCGGATTACTTATAAAGTATGATATTAGTAAAGTAAATAGTG GTAAAAACTAAAAAAGTACA
Downstream 100 bases:
>100_bases CAATAACTCCCATCCTTTTCGCATTACTTTTACGTAACATTAAATATTTCACCTTATGAAAACGATATATAAAATTTTCA CCTTTACACTCTTTATGAGG
Product: mobilisation protein C
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 534; Mature: 534
Protein sequence:
>534_residues MEHYIFYCKLSLLAVLSLITACCMLSRRWYVNLAAFLACLSGETFLAHLFFPGYMLCPAAASFIILFLSRIWDLSRTPAK GNGADPIRLPVRSGIRESRLEFHYHYSNFLVYGEAGSGKTKSIGKWLLSEYMRLGFAGFIYDFKDTDYTRTAYNLIKRHR YPHKFYYVSFDRPERSYRFNPLKVVRDRTELIQLMEDVLLALLPKKEQQNEWVAGGLGILRGVAFRFWDEFPEHCTLPHI LAFIMTASARQLSLFLQQNLVSEMLAGAYLKAEGSEKTQASYLSTLCNNLATISQNEEIAYVLSGDDFDFNLIDPETPKL FAVSNNFSKNSVYAPVISMLMTISARQFSMQNRVPFVYFLDEMTTVNIKNFETLPSVLREYKAAFILLTQSGAKLENLYG KLDRSSVEANFGNMFLGRTKDVEALKYYPLFFGKEEKERRSRSSGKSGASSSSSVTVSSQKEDIYQGKDFADLEPGEFIG SATRANVSYFKVKLEMYDDRNEEPLPDVRVLEPGELGRNFARILEEVRELFPCE
Sequences:
>Translated_534_residues MEHYIFYCKLSLLAVLSLITACCMLSRRWYVNLAAFLACLSGETFLAHLFFPGYMLCPAAASFIILFLSRIWDLSRTPAK GNGADPIRLPVRSGIRESRLEFHYHYSNFLVYGEAGSGKTKSIGKWLLSEYMRLGFAGFIYDFKDTDYTRTAYNLIKRHR YPHKFYYVSFDRPERSYRFNPLKVVRDRTELIQLMEDVLLALLPKKEQQNEWVAGGLGILRGVAFRFWDEFPEHCTLPHI LAFIMTASARQLSLFLQQNLVSEMLAGAYLKAEGSEKTQASYLSTLCNNLATISQNEEIAYVLSGDDFDFNLIDPETPKL FAVSNNFSKNSVYAPVISMLMTISARQFSMQNRVPFVYFLDEMTTVNIKNFETLPSVLREYKAAFILLTQSGAKLENLYG KLDRSSVEANFGNMFLGRTKDVEALKYYPLFFGKEEKERRSRSSGKSGASSSSSVTVSSQKEDIYQGKDFADLEPGEFIG SATRANVSYFKVKLEMYDDRNEEPLPDVRVLEPGELGRNFARILEEVRELFPCE >Mature_534_residues MEHYIFYCKLSLLAVLSLITACCMLSRRWYVNLAAFLACLSGETFLAHLFFPGYMLCPAAASFIILFLSRIWDLSRTPAK GNGADPIRLPVRSGIRESRLEFHYHYSNFLVYGEAGSGKTKSIGKWLLSEYMRLGFAGFIYDFKDTDYTRTAYNLIKRHR YPHKFYYVSFDRPERSYRFNPLKVVRDRTELIQLMEDVLLALLPKKEQQNEWVAGGLGILRGVAFRFWDEFPEHCTLPHI LAFIMTASARQLSLFLQQNLVSEMLAGAYLKAEGSEKTQASYLSTLCNNLATISQNEEIAYVLSGDDFDFNLIDPETPKL FAVSNNFSKNSVYAPVISMLMTISARQFSMQNRVPFVYFLDEMTTVNIKNFETLPSVLREYKAAFILLTQSGAKLENLYG KLDRSSVEANFGNMFLGRTKDVEALKYYPLFFGKEEKERRSRSSGKSGASSSSSVTVSSQKEDIYQGKDFADLEPGEFIG SATRANVSYFKVKLEMYDDRNEEPLPDVRVLEPGELGRNFARILEEVRELFPCE
Specific function: Unknown
COG id: COG3505
COG function: function code U; Type IV secretory pathway, VirD4 components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61046; Mature: 61046
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHYIFYCKLSLLAVLSLITACCMLSRRWYVNLAAFLACLSGETFLAHLFFPGYMLCPAA CCCEEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHH ASFIILFLSRIWDLSRTPAKGNGADPIRLPVRSGIRESRLEFHYHYSNFLVYGEAGSGKT HHHHHHHHHHHHCCCCCCCCCCCCCCEEECHHCCCHHHHHEEEEEEEEEEEEECCCCCCH KSIGKWLLSEYMRLGFAGFIYDFKDTDYTRTAYNLIKRHRYPHKFYYVSFDRPERSYRFN HHHHHHHHHHHHHHCHHHEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC PLKVVRDRTELIQLMEDVLLALLPKKEQQNEWVAGGLGILRGVAFRFWDEFPEHCTLPHI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LAFIMTASARQLSLFLQQNLVSEMLAGAYLKAEGSEKTQASYLSTLCNNLATISQNEEIA HHHHHHCCHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEE YVLSGDDFDFNLIDPETPKLFAVSNNFSKNSVYAPVISMLMTISARQFSMQNRVPFVYFL EEEECCCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE DEMTTVNIKNFETLPSVLREYKAAFILLTQSGAKLENLYGKLDRSSVEANFGNMFLGRTK CCCEEEECCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCHHHCCCCCCEECCCCC DVEALKYYPLFFGKEEKERRSRSSGKSGASSSSSVTVSSQKEDIYQGKDFADLEPGEFIG CCCHHEEECCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCHHHHHCCCCCCCCCCHHHHC SATRANVSYFKVKLEMYDDRNEEPLPDVRVLEPGELGRNFARILEEVRELFPCE CHHHCCEEEEEEEEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEHYIFYCKLSLLAVLSLITACCMLSRRWYVNLAAFLACLSGETFLAHLFFPGYMLCPAA CCCEEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHH ASFIILFLSRIWDLSRTPAKGNGADPIRLPVRSGIRESRLEFHYHYSNFLVYGEAGSGKT HHHHHHHHHHHHCCCCCCCCCCCCCCEEECHHCCCHHHHHEEEEEEEEEEEEECCCCCCH KSIGKWLLSEYMRLGFAGFIYDFKDTDYTRTAYNLIKRHRYPHKFYYVSFDRPERSYRFN HHHHHHHHHHHHHHCHHHEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC PLKVVRDRTELIQLMEDVLLALLPKKEQQNEWVAGGLGILRGVAFRFWDEFPEHCTLPHI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LAFIMTASARQLSLFLQQNLVSEMLAGAYLKAEGSEKTQASYLSTLCNNLATISQNEEIA HHHHHHCCHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEE YVLSGDDFDFNLIDPETPKLFAVSNNFSKNSVYAPVISMLMTISARQFSMQNRVPFVYFL EEEECCCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE DEMTTVNIKNFETLPSVLREYKAAFILLTQSGAKLENLYGKLDRSSVEANFGNMFLGRTK CCCEEEECCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCHHHCCCCCCEECCCCC DVEALKYYPLFFGKEEKERRSRSSGKSGASSSSSVTVSSQKEDIYQGKDFADLEPGEFIG CCCHHEEECCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCHHHHHCCCCCCCCCCHHHHC SATRANVSYFKVKLEMYDDRNEEPLPDVRVLEPGELGRNFARILEEVRELFPCE CHHHCCEEEEEEEEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA