| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150006200
Identifier: 150006200
GI number: 150006200
Start: 4585586
End: 4587223
Strand: Direct
Name: 150006200
Synonym: BVU_3711
Alternate gene names: NA
Gene position: 4585586-4587223 (Clockwise)
Preceding gene: 150006199
Following gene: 150006201
Centisome position: 88.81
GC content: 45.24
Gene sequence:
>1638_bases ATGAAATACTTGAAACAATATATGATCATAGGAGCGGTGACAATGATTACATCTTGCTCTGATTTTCTAGATACAGCTCC ATTGGATGCCCTGTCTCCTGCCACTACGTGGAAAACCGAGGATGATGCCCAAAAATTTGCTATCGGGTGTTATGGCGGTA ATAACTACGATACTTCCAGCTGGGAAGATGGTGGCAATATCTTATATCTCGACTGCGGGTCGGATTTTGGATATAACAAC TTTGAATGGGAAAACTATAAGACCATTGGCAACGGTACAATGACTCCGTCAGGGGCTGTTGCAAGCTTTTATGATTTCTC AGTCATCCGCCGTTGTAACACATTCCTGGAAAAGGTAAAGGAGATCCCATTTTCCAATGAGCAGACCAAAAACGATTTGA TCGGTCAGGTCCGTACTATTCGCGCTTATCGCTATTTTGTTATGAACTGGTGGTATGGAGGAGTGCCTGTGATTGACAAC TATAACTCAGCAGATGAAGCTAAAGTTCCCCGCAAGTCGGAGGAGGAAGTGAAAAATTACGTCAATACAGAATTGGACAC AGCCATCGGTGAACTGAATGCATCTCCCTCTGAAAGGGGACGGATCGCAAAGGGCGCTGCTATGGCAATCCGAATGCGCA GCGCACTGTATTATGGTGATTATGTGAAAGCAAAAGAAATGGCCGAGGCCATCATGAATTTGAAACAGTACGATCTGGAA CCGGACTACAGTAATTTGTTCAAAGTTGCCGGTCAGGACTCAAAAGAGATTATTTTGGCTGTTCAATATGTGAATTCCAC TTTGGAATTGGGCACAATAGGCCAGATGTATAATAATGGTGACGGTGGCTGGTCCTCCATTGTTCCGACTCAGAACCTGG TGGATACTTATGAAATGGCTGACGGCTTGACCAAAGAGGAATCCGGCTCTTATGACCCAAACCATCCGTTTGCCGGTCGC GATCCACGTATGGCCATGACCATTATATACCCAGGAATGGACTGGAATGGCACTGTAGTCAATACACTGGACAAGACAAT CAATGGTAAGGATAATGCAAACTATCCTCCTTCTGCGAACAATGCTTCAAAGACCGCCTTAACCTGGAGAAAATATTTGG ATGAACAATATGCTAATGGTATTTGGAACACGAATGCCTGCCCTATTGTAATCCGCTATGCAGAAGTGTTGCTTACTTAT GCGGAAGCAGTCAATGAACTTTCTGGTCCGTCTGCAGATGTTTATGACAAACTGGATCTGATTCGTGGACGTGTAGGAAT GCCGAAAGTGGATCGTGAGAAGTATGCTTCAAAGGAAACATTACGCCGGCTGATCCGCCGTGAACGTGGGGTGGAATTGG CCGGGGAAGGTGTGCGTCGGGCTGATATTCTGCGCTGGAAAGATGATAATGGAAAGATGGTTGCAGAAACAGTCCTGAAT GGTGTTTTGGAAAGGGTTGTCGGAACTGTAAATTATGCCGAGACTGATCCGACGAAACGTGCGGAGATTGACACGAACGC CCCTGCTACTGACAAGAAGATTGAAGACCGTGTATTCAAAGTGCATAATCGATACAATCCAATTCCTCAGGGAGCTATTG ATAATAACCCGAATCTTGAGCAAAACCCCGGGTATTAA
Upstream 100 bases:
>100_bases TCCACAAGCCAACGGCTGTCTTCCTATCCTCTATTACGTACTCATGCATTCGGCGTTAATGTTACATTCTAAATTGTTAT AGACTAAAAAAAATGGAATT
Downstream 100 bases:
>100_bases TACAATGACAGTATCGGTCTTTTGTAATTAGAATGGAAATCCAATAAAAAAATGGAAGGTGTGTCGTAATACACGATGCA CCTTCTTAATTTTTATTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Protein; Ragb/Susd Domain Protein; RagB/SusD Domain-Containing Protein; SusD/RagB Family Protein; Lipoprotein; RagB/SusD Family Protein; Liporotein
Number of amino acids: Translated: 545; Mature: 545
Protein sequence:
>545_residues MKYLKQYMIIGAVTMITSCSDFLDTAPLDALSPATTWKTEDDAQKFAIGCYGGNNYDTSSWEDGGNILYLDCGSDFGYNN FEWENYKTIGNGTMTPSGAVASFYDFSVIRRCNTFLEKVKEIPFSNEQTKNDLIGQVRTIRAYRYFVMNWWYGGVPVIDN YNSADEAKVPRKSEEEVKNYVNTELDTAIGELNASPSERGRIAKGAAMAIRMRSALYYGDYVKAKEMAEAIMNLKQYDLE PDYSNLFKVAGQDSKEIILAVQYVNSTLELGTIGQMYNNGDGGWSSIVPTQNLVDTYEMADGLTKEESGSYDPNHPFAGR DPRMAMTIIYPGMDWNGTVVNTLDKTINGKDNANYPPSANNASKTALTWRKYLDEQYANGIWNTNACPIVIRYAEVLLTY AEAVNELSGPSADVYDKLDLIRGRVGMPKVDREKYASKETLRRLIRRERGVELAGEGVRRADILRWKDDNGKMVAETVLN GVLERVVGTVNYAETDPTKRAEIDTNAPATDKKIEDRVFKVHNRYNPIPQGAIDNNPNLEQNPGY
Sequences:
>Translated_545_residues MKYLKQYMIIGAVTMITSCSDFLDTAPLDALSPATTWKTEDDAQKFAIGCYGGNNYDTSSWEDGGNILYLDCGSDFGYNN FEWENYKTIGNGTMTPSGAVASFYDFSVIRRCNTFLEKVKEIPFSNEQTKNDLIGQVRTIRAYRYFVMNWWYGGVPVIDN YNSADEAKVPRKSEEEVKNYVNTELDTAIGELNASPSERGRIAKGAAMAIRMRSALYYGDYVKAKEMAEAIMNLKQYDLE PDYSNLFKVAGQDSKEIILAVQYVNSTLELGTIGQMYNNGDGGWSSIVPTQNLVDTYEMADGLTKEESGSYDPNHPFAGR DPRMAMTIIYPGMDWNGTVVNTLDKTINGKDNANYPPSANNASKTALTWRKYLDEQYANGIWNTNACPIVIRYAEVLLTY AEAVNELSGPSADVYDKLDLIRGRVGMPKVDREKYASKETLRRLIRRERGVELAGEGVRRADILRWKDDNGKMVAETVLN GVLERVVGTVNYAETDPTKRAEIDTNAPATDKKIEDRVFKVHNRYNPIPQGAIDNNPNLEQNPGY >Mature_545_residues MKYLKQYMIIGAVTMITSCSDFLDTAPLDALSPATTWKTEDDAQKFAIGCYGGNNYDTSSWEDGGNILYLDCGSDFGYNN FEWENYKTIGNGTMTPSGAVASFYDFSVIRRCNTFLEKVKEIPFSNEQTKNDLIGQVRTIRAYRYFVMNWWYGGVPVIDN YNSADEAKVPRKSEEEVKNYVNTELDTAIGELNASPSERGRIAKGAAMAIRMRSALYYGDYVKAKEMAEAIMNLKQYDLE PDYSNLFKVAGQDSKEIILAVQYVNSTLELGTIGQMYNNGDGGWSSIVPTQNLVDTYEMADGLTKEESGSYDPNHPFAGR DPRMAMTIIYPGMDWNGTVVNTLDKTINGKDNANYPPSANNASKTALTWRKYLDEQYANGIWNTNACPIVIRYAEVLLTY AEAVNELSGPSADVYDKLDLIRGRVGMPKVDREKYASKETLRRLIRRERGVELAGEGVRRADILRWKDDNGKMVAETVLN GVLERVVGTVNYAETDPTKRAEIDTNAPATDKKIEDRVFKVHNRYNPIPQGAIDNNPNLEQNPGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61129; Mature: 61129
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYLKQYMIIGAVTMITSCSDFLDTAPLDALSPATTWKTEDDAQKFAIGCYGGNNYDTSS CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC WEDGGNILYLDCGSDFGYNNFEWENYKTIGNGTMTPSGAVASFYDFSVIRRCNTFLEKVK CCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH EIPFSNEQTKNDLIGQVRTIRAYRYFVMNWWYGGVPVIDNYNSADEAKVPRKSEEEVKNY HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCHHHHHHH VNTELDTAIGELNASPSERGRIAKGAAMAIRMRSALYYGDYVKAKEMAEAIMNLKQYDLE HCHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC PDYSNLFKVAGQDSKEIILAVQYVNSTLELGTIGQMYNNGDGGWSSIVPTQNLVDTYEMA CCHHHHHHHCCCCCCEEEEEEEECCCHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHH DGLTKEESGSYDPNHPFAGRDPRMAMTIIYPGMDWNGTVVNTLDKTINGKDNANYPPSAN CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCC NASKTALTWRKYLDEQYANGIWNTNACPIVIRYAEVLLTYAEAVNELSGPSADVYDKLDL CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH IRGRVGMPKVDREKYASKETLRRLIRRERGVELAGEGVRRADILRWKDDNGKMVAETVLN HHCCCCCCCCCHHHHCCHHHHHHHHHHHCCCEECCCCCCHHHEEEEECCCCCCHHHHHHH GVLERVVGTVNYAETDPTKRAEIDTNAPATDKKIEDRVFKVHNRYNPIPQGAIDNNPNLE HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC QNPGY CCCCC >Mature Secondary Structure MKYLKQYMIIGAVTMITSCSDFLDTAPLDALSPATTWKTEDDAQKFAIGCYGGNNYDTSS CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC WEDGGNILYLDCGSDFGYNNFEWENYKTIGNGTMTPSGAVASFYDFSVIRRCNTFLEKVK CCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH EIPFSNEQTKNDLIGQVRTIRAYRYFVMNWWYGGVPVIDNYNSADEAKVPRKSEEEVKNY HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCHHHHHHH VNTELDTAIGELNASPSERGRIAKGAAMAIRMRSALYYGDYVKAKEMAEAIMNLKQYDLE HCHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC PDYSNLFKVAGQDSKEIILAVQYVNSTLELGTIGQMYNNGDGGWSSIVPTQNLVDTYEMA CCHHHHHHHCCCCCCEEEEEEEECCCHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHH DGLTKEESGSYDPNHPFAGRDPRMAMTIIYPGMDWNGTVVNTLDKTINGKDNANYPPSAN CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCC NASKTALTWRKYLDEQYANGIWNTNACPIVIRYAEVLLTYAEAVNELSGPSADVYDKLDL CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH IRGRVGMPKVDREKYASKETLRRLIRRERGVELAGEGVRRADILRWKDDNGKMVAETVLN HHCCCCCCCCCHHHHCCHHHHHHHHHHHCCCEECCCCCCHHHEEEEECCCCCCHHHHHHH GVLERVVGTVNYAETDPTKRAEIDTNAPATDKKIEDRVFKVHNRYNPIPQGAIDNNPNLE HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC QNPGY CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA