| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is yhcH [H]
Identifier: 150006120
GI number: 150006120
Start: 4498248
End: 4498955
Strand: Direct
Name: yhcH [H]
Synonym: BVU_3631
Alternate gene names: 150006120
Gene position: 4498248-4498955 (Clockwise)
Preceding gene: 150006119
Following gene: 150006121
Centisome position: 87.12
GC content: 41.81
Gene sequence:
>708_bases ATGAATATCATAATAAACCAATTACAAAAGAACTTTGGCCCGAAAGTGGCTGTAGACATAGAAAATTACTCCATTCAAAG CGGTAACATGTTGGGACTGGTGGGCAATAACGGAGCAGGAAAAACGACCCTGTTCCGCCTGATGCTGGACTTGCTGAAAG CCGACGGAGGCAGTGTACATATCGGAAACATCGATGTGAGCCGGAGTGAGGAATGGAAAAATATAACGGGAGCTTTCATT GACGAAGGTTTCCTGATAGATTATCTTACCCCCGAAGAATATTTCTACTTTGTAGGAAAAATGTACGGACTAACAAAAGA AGAAGTAGATAAACGTGTCGCTAGGTTTGAACGTTTTATGAATGGCGAAGTCATCGGACAAAAAAAACTGATTCGTAACT ATTCGGCAGGCAACAAACAGAAAATAGGTATCATTTCGGCTATGCTGCACCAACCGCAGGTACTGGTTCTAGATGAACCG TTCAACTTTCTGGACCCTAGTTCGCAGTCCATTATCAAGCATTTACTGAAAGCTTATAATGAAGAAACCGGAGCCACCAT ACTGGTATCCAGCCATAATCTGAACCACACAGTAGATATATGCCCACGCATCGCTCTGTTGGAAAACGGAAAGATTATCC GAGATATTGACAATAAAGGGAATTCCGCCGAAAAGGAATTAGAGGACTATTTTAATGTAACAGAATGA
Upstream 100 bases:
>100_bases AACCCACAATATTTGGATAAAAAATATCTATAACCGTTTCATGAAGCGCCGTTATGAGAATATGGAAGGCTTCCGTGACT CACGTTAAAACGAATTGCGT
Downstream 100 bases:
>100_bases AAAAACTACTATTCCATTTGCTGGTATTAGGTACACTGGCCATGTTGTTGGTTTCATGCGGTACCTCTGCCCCACGTTAT AACTACAAAGAACTGACGCG
Product: ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MNIIINQLQKNFGPKVAVDIENYSIQSGNMLGLVGNNGAGKTTLFRLMLDLLKADGGSVHIGNIDVSRSEEWKNITGAFI DEGFLIDYLTPEEYFYFVGKMYGLTKEEVDKRVARFERFMNGEVIGQKKLIRNYSAGNKQKIGIISAMLHQPQVLVLDEP FNFLDPSSQSIIKHLLKAYNEETGATILVSSHNLNHTVDICPRIALLENGKIIRDIDNKGNSAEKELEDYFNVTE
Sequences:
>Translated_235_residues MNIIINQLQKNFGPKVAVDIENYSIQSGNMLGLVGNNGAGKTTLFRLMLDLLKADGGSVHIGNIDVSRSEEWKNITGAFI DEGFLIDYLTPEEYFYFVGKMYGLTKEEVDKRVARFERFMNGEVIGQKKLIRNYSAGNKQKIGIISAMLHQPQVLVLDEP FNFLDPSSQSIIKHLLKAYNEETGATILVSSHNLNHTVDICPRIALLENGKIIRDIDNKGNSAEKELEDYFNVTE >Mature_235_residues MNIIINQLQKNFGPKVAVDIENYSIQSGNMLGLVGNNGAGKTTLFRLMLDLLKADGGSVHIGNIDVSRSEEWKNITGAFI DEGFLIDYLTPEEYFYFVGKMYGLTKEEVDKRVARFERFMNGEVIGQKKLIRNYSAGNKQKIGIISAMLHQPQVLVLDEP FNFLDPSSQSIIKHLLKAYNEETGATILVSSHNLNHTVDICPRIALLENGKIIRDIDNKGNSAEKELEDYFNVTE
Specific function: Unknown
COG id: COG1131
COG function: function code V; ABC-type multidrug transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI27881501, Length=200, Percent_Identity=28.5, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI30795238, Length=200, Percent_Identity=28.5, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI116734710, Length=215, Percent_Identity=28.3720930232558, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI150417984, Length=213, Percent_Identity=30.0469483568075, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI105990541, Length=200, Percent_Identity=27.5, Blast_Score=85, Evalue=4e-17, Organism=Homo sapiens, GI21536376, Length=203, Percent_Identity=29.5566502463054, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI153792144, Length=203, Percent_Identity=27.5862068965517, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI27477115, Length=193, Percent_Identity=33.6787564766839, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI45446740, Length=201, Percent_Identity=26.3681592039801, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI47078218, Length=201, Percent_Identity=26.3681592039801, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI27262624, Length=231, Percent_Identity=25.5411255411255, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI27262626, Length=231, Percent_Identity=25.5411255411255, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI31657092, Length=202, Percent_Identity=26.2376237623762, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI27436953, Length=211, Percent_Identity=26.5402843601896, Blast_Score=78, Evalue=5e-15, Organism=Homo sapiens, GI171184400, Length=199, Percent_Identity=30.1507537688442, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI6005701, Length=198, Percent_Identity=24.7474747474747, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI9961252, Length=202, Percent_Identity=29.7029702970297, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI9961250, Length=202, Percent_Identity=29.7029702970297, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI4505771, Length=202, Percent_Identity=29.7029702970297, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI42741659, Length=224, Percent_Identity=29.4642857142857, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI87081782, Length=235, Percent_Identity=28.936170212766, Blast_Score=97, Evalue=6e-22, Organism=Escherichia coli, GI48994943, Length=208, Percent_Identity=28.3653846153846, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1787370, Length=208, Percent_Identity=26.4423076923077, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1788450, Length=214, Percent_Identity=22.4299065420561, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788761, Length=220, Percent_Identity=26.8181818181818, Blast_Score=84, Evalue=6e-18, Organism=Escherichia coli, GI1786563, Length=206, Percent_Identity=27.1844660194175, Blast_Score=84, Evalue=6e-18, Organism=Escherichia coli, GI87081791, Length=210, Percent_Identity=23.8095238095238, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786398, Length=197, Percent_Identity=29.9492385786802, Blast_Score=81, Evalue=7e-17, Organism=Escherichia coli, GI1790544, Length=232, Percent_Identity=25, Blast_Score=80, Evalue=9e-17, Organism=Escherichia coli, GI87081709, Length=211, Percent_Identity=25.1184834123223, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1787712, Length=205, Percent_Identity=25.3658536585366, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI1789032, Length=219, Percent_Identity=25.1141552511416, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787164, Length=214, Percent_Identity=24.7663551401869, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1788002, Length=199, Percent_Identity=30.6532663316583, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1788165, Length=185, Percent_Identity=25.9459459459459, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1787500, Length=213, Percent_Identity=27.2300469483568, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1786319, Length=240, Percent_Identity=24.5833333333333, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1790467, Length=211, Percent_Identity=22.7488151658768, Blast_Score=70, Evalue=9e-14, Organism=Escherichia coli, GI1786253, Length=204, Percent_Identity=24.0196078431373, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1790525, Length=222, Percent_Identity=25.2252252252252, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787029, Length=217, Percent_Identity=23.963133640553, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787089, Length=230, Percent_Identity=26.5217391304348, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1789864, Length=228, Percent_Identity=24.5614035087719, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI87082267, Length=186, Percent_Identity=22.5806451612903, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1790190, Length=205, Percent_Identity=26.8292682926829, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI48995001, Length=213, Percent_Identity=24.8826291079812, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI48994883, Length=212, Percent_Identity=27.8301886792453, Blast_Score=61, Evalue=6e-11, Organism=Escherichia coli, GI1787792, Length=202, Percent_Identity=25.2475247524752, Blast_Score=61, Evalue=8e-11, Organism=Caenorhabditis elegans, GI71983510, Length=211, Percent_Identity=31.2796208530806, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI71983516, Length=211, Percent_Identity=31.2796208530806, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI71983523, Length=211, Percent_Identity=31.2796208530806, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI115533608, Length=223, Percent_Identity=25.1121076233184, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17565586, Length=213, Percent_Identity=26.2910798122066, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI193211017, Length=201, Percent_Identity=26.865671641791, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71996809, Length=201, Percent_Identity=26.865671641791, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI193211015, Length=201, Percent_Identity=26.865671641791, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI25146777, Length=200, Percent_Identity=27, Blast_Score=69, Evalue=1e-12, Organism=Caenorhabditis elegans, GI212646699, Length=216, Percent_Identity=28.2407407407407, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI193202349, Length=202, Percent_Identity=30.1980198019802, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17541710, Length=213, Percent_Identity=27.6995305164319, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115532730, Length=208, Percent_Identity=28.8461538461538, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17567265, Length=200, Percent_Identity=28, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17510237, Length=188, Percent_Identity=27.6595744680851, Blast_Score=64, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6321121, Length=193, Percent_Identity=28.4974093264249, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI28574150, Length=216, Percent_Identity=28.7037037037037, Blast_Score=109, Evalue=1e-24, Organism=Drosophila melanogaster, GI116007328, Length=216, Percent_Identity=28.7037037037037, Blast_Score=109, Evalue=1e-24, Organism=Drosophila melanogaster, GI24582014, Length=207, Percent_Identity=24.6376811594203, Blast_Score=87, Evalue=9e-18, Organism=Drosophila melanogaster, GI24582012, Length=207, Percent_Identity=24.6376811594203, Blast_Score=87, Evalue=9e-18, Organism=Drosophila melanogaster, GI24643674, Length=214, Percent_Identity=25.7009345794392, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI23397593, Length=211, Percent_Identity=30.3317535545024, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI28573571, Length=212, Percent_Identity=26.4150943396226, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI28573573, Length=212, Percent_Identity=26.4150943396226, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI24666092, Length=211, Percent_Identity=25.5924170616114, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI221512771, Length=209, Percent_Identity=24.4019138755981, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI116007184, Length=224, Percent_Identity=25.8928571428571, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI221500365, Length=224, Percent_Identity=25.8928571428571, Blast_Score=77, Evalue=7e-15, Organism=Drosophila melanogaster, GI85725262, Length=225, Percent_Identity=24.8888888888889, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24650855, Length=174, Percent_Identity=26.4367816091954, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24650853, Length=174, Percent_Identity=26.4367816091954, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24648314, Length=214, Percent_Identity=25.2336448598131, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI281362751, Length=174, Percent_Identity=26.4367816091954, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI281363262, Length=195, Percent_Identity=29.7435897435897, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24653245, Length=195, Percent_Identity=29.7435897435897, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 26402; Mature: 26402
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIIINQLQKNFGPKVAVDIENYSIQSGNMLGLVGNNGAGKTTLFRLMLDLLKADGGSVH CCHHHHHHHHHCCCEEEEEECCEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEE IGNIDVSRSEEWKNITGAFIDEGFLIDYLTPEEYFYFVGKMYGLTKEEVDKRVARFERFM EECEECCCCCCHHCCCHHHHCCCEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NGEVIGQKKLIRNYSAGNKQKIGIISAMLHQPQVLVLDEPFNFLDPSSQSIIKHLLKAYN CCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHC EETGATILVSSHNLNHTVDICPRIALLENGKIIRDIDNKGNSAEKELEDYFNVTE CCCCCEEEEECCCCCCCHHHCCEEEEECCCCEEEECCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MNIIINQLQKNFGPKVAVDIENYSIQSGNMLGLVGNNGAGKTTLFRLMLDLLKADGGSVH CCHHHHHHHHHCCCEEEEEECCEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEE IGNIDVSRSEEWKNITGAFIDEGFLIDYLTPEEYFYFVGKMYGLTKEEVDKRVARFERFM EECEECCCCCCHHCCCHHHHCCCEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NGEVIGQKKLIRNYSAGNKQKIGIISAMLHQPQVLVLDEPFNFLDPSSQSIIKHLLKAYN CCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHC EETGATILVSSHNLNHTVDICPRIALLENGKIIRDIDNKGNSAEKELEDYFNVTE CCCCCEEEEECCCCCCCHHHCCEEEEECCCCEEEECCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969498; 9384377 [H]