Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
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Accession | NC_009614 |
Length | 5,163,189 |
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The map label for this gene is oprM [H]
Identifier: 150006084
GI number: 150006084
Start: 4458895
End: 4460349
Strand: Direct
Name: oprM [H]
Synonym: BVU_3593
Alternate gene names: 150006084
Gene position: 4458895-4460349 (Clockwise)
Preceding gene: 150006083
Following gene: 150006085
Centisome position: 86.36
GC content: 41.86
Gene sequence:
>1455_bases ATGAAGAAGATGAAAAATAACAATATAAACAAAACAGGTTTAATAATAGGAGCTTTCTGTCTGATTATGGTAAGTTGCAA AGCCCCTTCCCTTACTCCGACAGAAAAGATAGAGTTACCCGAGTTCTATATGGATAGGGAAACGGACAGCACTACTATCT CTTCCATGTCATGGAAAACATTTTTTCCAGATACGTTATTGCAAAGTTATATAGCCGAAGCGTTAAATAACAATCATTCA TTCCTTCAAACTATAGAACGGATATCCATTGCCCGTTCACAAGTTCGAGTAGGAAAAGGAGCGCTGCTGCCCGATCTTTC ATTAGGCATTGATGGTGGAGTACAACGTTTTGGCGAGTACACTATGGACGGAGTTGGTAACAGCACCACCAACACTCCCG ATTTAGAAAAAGACAAACATATTCCAGATCCCTACCGGAATTTCAACCTAGGACTCAATTTTCAATGGGAAGCTAACATA TGGGGTAAGCTAACCGATAAAAAACGATCGACCGTATCCCGCTGGATGCAGTCTGTAGAAGCTATGCGTCTGGCACGCAC CTTATTGATATCAGAAGTAGGTACACACTATTTTGAATTAATAGGACTGGATAAACAGCGATATGTGCTACGCGAAGCCA TCCTAACAGCCAGAGATGCTTATAATTTAACCGATGAACTGATGAAAGAAGGTGAAGTAACCCGACTTTCTGTAGACCAA TTCCGGTCACGACGCCTTAAATTGGAAGAAATGCTGCTTGCAAACGAACAGCAAATAAGTGAAAAGGAACGTGCCATCGC CACCTTATTAGGACGACTGCCTTTCAAGGTGAAACGAGTGTCATTTGAAACTGCATGTAGTTATGAGTTTCCCACAGATG CAGGAATCCCGTCACAACTTTTGCAATATCGCCCGGATATAAAGGCTGCCGAACTGGAGTTATTAGCTAGTAAATCCGAC GTATCTGCAGCGCGAAAAGCTTTCTTCCCATCCATCGTGATTGGAGGAAACGGAGGTTTTAACGCATTTGATCTGGATAA ATGGTTTACTGCTCCTGCATCCCTGGTTTACAATCTCGGTGCAGGTATCACAGCACCTATATTCAAACAAAATACTATAC GTGCATTATGGAATGATGCGAAAAGCCAGCAACGCATCGCTTTGTTAGGATATCACGATACGGTATTAAAAGCCTATGAA GAAGTATTAAACCTCATTACTGCATCATCGCAAATGCACCAGCGCAAAAAGTTGAAAGAAGAAGAAAGCCGTATCCATCA TCGATCTATTTATAATGCAAATGAAATGTTTAAAGTAGGATTCGCAGGCTATCTGGATGTACTGTCGGCCGATGAACGTT TCCTGGATTGTGAATTGGAACGTATCGCTCTGAATGTGGAATCTTGTAAACTGCATATCATGCTTTACCGTGCCTTAGGA GGTGGAAGCAATTAG
Upstream 100 bases:
>100_bases ATGTTTATCGGTACATTCGTAGGAATCTTCCTTGTACCTGGACTTTACCTTATTTTCGAGAGTTGGTCTGCACATCTTAA CCGTAATAAAGTCAGCTATG
Downstream 100 bases:
>100_bases TTAATATACTTATATTTTTTGATTTGTTTGGTTAGGAACCGCCCCCGGCAAGCGTGTCGTCAGGACGGTTCTTTTTTACT CTTATAATTCAAGAAATATC
Product: outer membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MKKMKNNNINKTGLIIGAFCLIMVSCKAPSLTPTEKIELPEFYMDRETDSTTISSMSWKTFFPDTLLQSYIAEALNNNHS FLQTIERISIARSQVRVGKGALLPDLSLGIDGGVQRFGEYTMDGVGNSTTNTPDLEKDKHIPDPYRNFNLGLNFQWEANI WGKLTDKKRSTVSRWMQSVEAMRLARTLLISEVGTHYFELIGLDKQRYVLREAILTARDAYNLTDELMKEGEVTRLSVDQ FRSRRLKLEEMLLANEQQISEKERAIATLLGRLPFKVKRVSFETACSYEFPTDAGIPSQLLQYRPDIKAAELELLASKSD VSAARKAFFPSIVIGGNGGFNAFDLDKWFTAPASLVYNLGAGITAPIFKQNTIRALWNDAKSQQRIALLGYHDTVLKAYE EVLNLITASSQMHQRKKLKEEESRIHHRSIYNANEMFKVGFAGYLDVLSADERFLDCELERIALNVESCKLHIMLYRALG GGSN
Sequences:
>Translated_484_residues MKKMKNNNINKTGLIIGAFCLIMVSCKAPSLTPTEKIELPEFYMDRETDSTTISSMSWKTFFPDTLLQSYIAEALNNNHS FLQTIERISIARSQVRVGKGALLPDLSLGIDGGVQRFGEYTMDGVGNSTTNTPDLEKDKHIPDPYRNFNLGLNFQWEANI WGKLTDKKRSTVSRWMQSVEAMRLARTLLISEVGTHYFELIGLDKQRYVLREAILTARDAYNLTDELMKEGEVTRLSVDQ FRSRRLKLEEMLLANEQQISEKERAIATLLGRLPFKVKRVSFETACSYEFPTDAGIPSQLLQYRPDIKAAELELLASKSD VSAARKAFFPSIVIGGNGGFNAFDLDKWFTAPASLVYNLGAGITAPIFKQNTIRALWNDAKSQQRIALLGYHDTVLKAYE EVLNLITASSQMHQRKKLKEEESRIHHRSIYNANEMFKVGFAGYLDVLSADERFLDCELERIALNVESCKLHIMLYRALG GGSN >Mature_484_residues MKKMKNNNINKTGLIIGAFCLIMVSCKAPSLTPTEKIELPEFYMDRETDSTTISSMSWKTFFPDTLLQSYIAEALNNNHS FLQTIERISIARSQVRVGKGALLPDLSLGIDGGVQRFGEYTMDGVGNSTTNTPDLEKDKHIPDPYRNFNLGLNFQWEANI WGKLTDKKRSTVSRWMQSVEAMRLARTLLISEVGTHYFELIGLDKQRYVLREAILTARDAYNLTDELMKEGEVTRLSVDQ FRSRRLKLEEMLLANEQQISEKERAIATLLGRLPFKVKRVSFETACSYEFPTDAGIPSQLLQYRPDIKAAELELLASKSD VSAARKAFFPSIVIGGNGGFNAFDLDKWFTAPASLVYNLGAGITAPIFKQNTIRALWNDAKSQQRIALLGYHDTVLKAYE EVLNLITASSQMHQRKKLKEEESRIHHRSIYNANEMFKVGFAGYLDVLSADERFLDCELERIALNVESCKLHIMLYRALG GGSN
Specific function: The ability to export antibiotics and solvents is dramatically decreased in the presence of the proton conductor carbonyl cyanide m-chlorophenylhydrazone (CCCP), showing that an energized inner membrane is required for efflux. It is thought that the mexB
COG id: COG1538
COG function: function code MU; Outer membrane protein
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor. Note=Attached to the outer membrane by a lipid anchor and via the transmembrane beta-barrel. The membrane anchor is not necessary for antibiotic efflux. In one report (PubMed:10889211) the Cys-18- Gly mutant is reported
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]
Homologues:
Organism=Escherichia coli, GI1786785, Length=466, Percent_Identity=24.6781115879828, Blast_Score=137, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003423 - InterPro: IPR010131 [H]
Pfam domain/function: PF02321 OEP [H]
EC number: NA
Molecular weight: Translated: 54728; Mature: 54728
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKMKNNNINKTGLIIGAFCLIMVSCKAPSLTPTEKIELPEFYMDRETDSTTISSMSWKT CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC FFPDTLLQSYIAEALNNNHSFLQTIERISIARSQVRVGKGALLPDLSLGIDGGVQRFGEY CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH TMDGVGNSTTNTPDLEKDKHIPDPYRNFNLGLNFQWEANIWGKLTDKKRSTVSRWMQSVE HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH AMRLARTLLISEVGTHYFELIGLDKQRYVLREAILTARDAYNLTDELMKEGEVTRLSVDQ HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEHHH FRSRRLKLEEMLLANEQQISEKERAIATLLGRLPFKVKRVSFETACSYEFPTDAGIPSQL HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCCCCCCCCCCHHHH LQYRPDIKAAELELLASKSDVSAARKAFFPSIVIGGNGGFNAFDLDKWFTAPASLVYNLG HHCCCCCCHHHHHHHHCCHHHHHHHHHHCCEEEEECCCCCCCEECHHHHCCHHHHHHHHC AGITAPIFKQNTIRALWNDAKSQQRIALLGYHDTVLKAYEEVLNLITASSQMHQRKKLKE CCCCCCHHCCHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EESRIHHRSIYNANEMFKVGFAGYLDVLSADERFLDCELERIALNVESCKLHIMLYRALG HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHEEEHHHHEEEEEEEEECC GGSN CCCC >Mature Secondary Structure MKKMKNNNINKTGLIIGAFCLIMVSCKAPSLTPTEKIELPEFYMDRETDSTTISSMSWKT CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC FFPDTLLQSYIAEALNNNHSFLQTIERISIARSQVRVGKGALLPDLSLGIDGGVQRFGEY CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH TMDGVGNSTTNTPDLEKDKHIPDPYRNFNLGLNFQWEANIWGKLTDKKRSTVSRWMQSVE HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH AMRLARTLLISEVGTHYFELIGLDKQRYVLREAILTARDAYNLTDELMKEGEVTRLSVDQ HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEHHH FRSRRLKLEEMLLANEQQISEKERAIATLLGRLPFKVKRVSFETACSYEFPTDAGIPSQL HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCCCCCCCCCCHHHH LQYRPDIKAAELELLASKSDVSAARKAFFPSIVIGGNGGFNAFDLDKWFTAPASLVYNLG HHCCCCCCHHHHHHHHCCHHHHHHHHHHCCEEEEECCCCCCCEECHHHHCCHHHHHHHHC AGITAPIFKQNTIRALWNDAKSQQRIALLGYHDTVLKAYEEVLNLITASSQMHQRKKLKE CCCCCCHHCCHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EESRIHHRSIYNANEMFKVGFAGYLDVLSADERFLDCELERIALNVESCKLHIMLYRALG HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHEEEHHHHEEEEEEEEECC GGSN CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8226684; 10889211; 10984043; 7968531; 8540696; 9401051; 9603892; 10952562 [H]