Definition Bacteroides vulgatus ATCC 8482 chromosome, complete genome.
Accession NC_009614
Length 5,163,189

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The map label for this gene is oprM [H]

Identifier: 150006084

GI number: 150006084

Start: 4458895

End: 4460349

Strand: Direct

Name: oprM [H]

Synonym: BVU_3593

Alternate gene names: 150006084

Gene position: 4458895-4460349 (Clockwise)

Preceding gene: 150006083

Following gene: 150006085

Centisome position: 86.36

GC content: 41.86

Gene sequence:

>1455_bases
ATGAAGAAGATGAAAAATAACAATATAAACAAAACAGGTTTAATAATAGGAGCTTTCTGTCTGATTATGGTAAGTTGCAA
AGCCCCTTCCCTTACTCCGACAGAAAAGATAGAGTTACCCGAGTTCTATATGGATAGGGAAACGGACAGCACTACTATCT
CTTCCATGTCATGGAAAACATTTTTTCCAGATACGTTATTGCAAAGTTATATAGCCGAAGCGTTAAATAACAATCATTCA
TTCCTTCAAACTATAGAACGGATATCCATTGCCCGTTCACAAGTTCGAGTAGGAAAAGGAGCGCTGCTGCCCGATCTTTC
ATTAGGCATTGATGGTGGAGTACAACGTTTTGGCGAGTACACTATGGACGGAGTTGGTAACAGCACCACCAACACTCCCG
ATTTAGAAAAAGACAAACATATTCCAGATCCCTACCGGAATTTCAACCTAGGACTCAATTTTCAATGGGAAGCTAACATA
TGGGGTAAGCTAACCGATAAAAAACGATCGACCGTATCCCGCTGGATGCAGTCTGTAGAAGCTATGCGTCTGGCACGCAC
CTTATTGATATCAGAAGTAGGTACACACTATTTTGAATTAATAGGACTGGATAAACAGCGATATGTGCTACGCGAAGCCA
TCCTAACAGCCAGAGATGCTTATAATTTAACCGATGAACTGATGAAAGAAGGTGAAGTAACCCGACTTTCTGTAGACCAA
TTCCGGTCACGACGCCTTAAATTGGAAGAAATGCTGCTTGCAAACGAACAGCAAATAAGTGAAAAGGAACGTGCCATCGC
CACCTTATTAGGACGACTGCCTTTCAAGGTGAAACGAGTGTCATTTGAAACTGCATGTAGTTATGAGTTTCCCACAGATG
CAGGAATCCCGTCACAACTTTTGCAATATCGCCCGGATATAAAGGCTGCCGAACTGGAGTTATTAGCTAGTAAATCCGAC
GTATCTGCAGCGCGAAAAGCTTTCTTCCCATCCATCGTGATTGGAGGAAACGGAGGTTTTAACGCATTTGATCTGGATAA
ATGGTTTACTGCTCCTGCATCCCTGGTTTACAATCTCGGTGCAGGTATCACAGCACCTATATTCAAACAAAATACTATAC
GTGCATTATGGAATGATGCGAAAAGCCAGCAACGCATCGCTTTGTTAGGATATCACGATACGGTATTAAAAGCCTATGAA
GAAGTATTAAACCTCATTACTGCATCATCGCAAATGCACCAGCGCAAAAAGTTGAAAGAAGAAGAAAGCCGTATCCATCA
TCGATCTATTTATAATGCAAATGAAATGTTTAAAGTAGGATTCGCAGGCTATCTGGATGTACTGTCGGCCGATGAACGTT
TCCTGGATTGTGAATTGGAACGTATCGCTCTGAATGTGGAATCTTGTAAACTGCATATCATGCTTTACCGTGCCTTAGGA
GGTGGAAGCAATTAG

Upstream 100 bases:

>100_bases
ATGTTTATCGGTACATTCGTAGGAATCTTCCTTGTACCTGGACTTTACCTTATTTTCGAGAGTTGGTCTGCACATCTTAA
CCGTAATAAAGTCAGCTATG

Downstream 100 bases:

>100_bases
TTAATATACTTATATTTTTTGATTTGTTTGGTTAGGAACCGCCCCCGGCAAGCGTGTCGTCAGGACGGTTCTTTTTTACT
CTTATAATTCAAGAAATATC

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MKKMKNNNINKTGLIIGAFCLIMVSCKAPSLTPTEKIELPEFYMDRETDSTTISSMSWKTFFPDTLLQSYIAEALNNNHS
FLQTIERISIARSQVRVGKGALLPDLSLGIDGGVQRFGEYTMDGVGNSTTNTPDLEKDKHIPDPYRNFNLGLNFQWEANI
WGKLTDKKRSTVSRWMQSVEAMRLARTLLISEVGTHYFELIGLDKQRYVLREAILTARDAYNLTDELMKEGEVTRLSVDQ
FRSRRLKLEEMLLANEQQISEKERAIATLLGRLPFKVKRVSFETACSYEFPTDAGIPSQLLQYRPDIKAAELELLASKSD
VSAARKAFFPSIVIGGNGGFNAFDLDKWFTAPASLVYNLGAGITAPIFKQNTIRALWNDAKSQQRIALLGYHDTVLKAYE
EVLNLITASSQMHQRKKLKEEESRIHHRSIYNANEMFKVGFAGYLDVLSADERFLDCELERIALNVESCKLHIMLYRALG
GGSN

Sequences:

>Translated_484_residues
MKKMKNNNINKTGLIIGAFCLIMVSCKAPSLTPTEKIELPEFYMDRETDSTTISSMSWKTFFPDTLLQSYIAEALNNNHS
FLQTIERISIARSQVRVGKGALLPDLSLGIDGGVQRFGEYTMDGVGNSTTNTPDLEKDKHIPDPYRNFNLGLNFQWEANI
WGKLTDKKRSTVSRWMQSVEAMRLARTLLISEVGTHYFELIGLDKQRYVLREAILTARDAYNLTDELMKEGEVTRLSVDQ
FRSRRLKLEEMLLANEQQISEKERAIATLLGRLPFKVKRVSFETACSYEFPTDAGIPSQLLQYRPDIKAAELELLASKSD
VSAARKAFFPSIVIGGNGGFNAFDLDKWFTAPASLVYNLGAGITAPIFKQNTIRALWNDAKSQQRIALLGYHDTVLKAYE
EVLNLITASSQMHQRKKLKEEESRIHHRSIYNANEMFKVGFAGYLDVLSADERFLDCELERIALNVESCKLHIMLYRALG
GGSN
>Mature_484_residues
MKKMKNNNINKTGLIIGAFCLIMVSCKAPSLTPTEKIELPEFYMDRETDSTTISSMSWKTFFPDTLLQSYIAEALNNNHS
FLQTIERISIARSQVRVGKGALLPDLSLGIDGGVQRFGEYTMDGVGNSTTNTPDLEKDKHIPDPYRNFNLGLNFQWEANI
WGKLTDKKRSTVSRWMQSVEAMRLARTLLISEVGTHYFELIGLDKQRYVLREAILTARDAYNLTDELMKEGEVTRLSVDQ
FRSRRLKLEEMLLANEQQISEKERAIATLLGRLPFKVKRVSFETACSYEFPTDAGIPSQLLQYRPDIKAAELELLASKSD
VSAARKAFFPSIVIGGNGGFNAFDLDKWFTAPASLVYNLGAGITAPIFKQNTIRALWNDAKSQQRIALLGYHDTVLKAYE
EVLNLITASSQMHQRKKLKEEESRIHHRSIYNANEMFKVGFAGYLDVLSADERFLDCELERIALNVESCKLHIMLYRALG
GGSN

Specific function: The ability to export antibiotics and solvents is dramatically decreased in the presence of the proton conductor carbonyl cyanide m-chlorophenylhydrazone (CCCP), showing that an energized inner membrane is required for efflux. It is thought that the mexB

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor. Note=Attached to the outer membrane by a lipid anchor and via the transmembrane beta-barrel. The membrane anchor is not necessary for antibiotic efflux. In one report (PubMed:10889211) the Cys-18- Gly mutant is reported

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI1786785, Length=466, Percent_Identity=24.6781115879828, Blast_Score=137, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010131 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 54728; Mature: 54728

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMKNNNINKTGLIIGAFCLIMVSCKAPSLTPTEKIELPEFYMDRETDSTTISSMSWKT
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC
FFPDTLLQSYIAEALNNNHSFLQTIERISIARSQVRVGKGALLPDLSLGIDGGVQRFGEY
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
TMDGVGNSTTNTPDLEKDKHIPDPYRNFNLGLNFQWEANIWGKLTDKKRSTVSRWMQSVE
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH
AMRLARTLLISEVGTHYFELIGLDKQRYVLREAILTARDAYNLTDELMKEGEVTRLSVDQ
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEHHH
FRSRRLKLEEMLLANEQQISEKERAIATLLGRLPFKVKRVSFETACSYEFPTDAGIPSQL
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCCCCCCCCCCHHHH
LQYRPDIKAAELELLASKSDVSAARKAFFPSIVIGGNGGFNAFDLDKWFTAPASLVYNLG
HHCCCCCCHHHHHHHHCCHHHHHHHHHHCCEEEEECCCCCCCEECHHHHCCHHHHHHHHC
AGITAPIFKQNTIRALWNDAKSQQRIALLGYHDTVLKAYEEVLNLITASSQMHQRKKLKE
CCCCCCHHCCHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EESRIHHRSIYNANEMFKVGFAGYLDVLSADERFLDCELERIALNVESCKLHIMLYRALG
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHEEEHHHHEEEEEEEEECC
GGSN
CCCC
>Mature Secondary Structure
MKKMKNNNINKTGLIIGAFCLIMVSCKAPSLTPTEKIELPEFYMDRETDSTTISSMSWKT
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC
FFPDTLLQSYIAEALNNNHSFLQTIERISIARSQVRVGKGALLPDLSLGIDGGVQRFGEY
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
TMDGVGNSTTNTPDLEKDKHIPDPYRNFNLGLNFQWEANIWGKLTDKKRSTVSRWMQSVE
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH
AMRLARTLLISEVGTHYFELIGLDKQRYVLREAILTARDAYNLTDELMKEGEVTRLSVDQ
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEHHH
FRSRRLKLEEMLLANEQQISEKERAIATLLGRLPFKVKRVSFETACSYEFPTDAGIPSQL
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCCCCCCCCCCHHHH
LQYRPDIKAAELELLASKSDVSAARKAFFPSIVIGGNGGFNAFDLDKWFTAPASLVYNLG
HHCCCCCCHHHHHHHHCCHHHHHHHHHHCCEEEEECCCCCCCEECHHHHCCHHHHHHHHC
AGITAPIFKQNTIRALWNDAKSQQRIALLGYHDTVLKAYEEVLNLITASSQMHQRKKLKE
CCCCCCHHCCHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EESRIHHRSIYNANEMFKVGFAGYLDVLSADERFLDCELERIALNVESCKLHIMLYRALG
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHEEEHHHHEEEEEEEEECC
GGSN
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8226684; 10889211; 10984043; 7968531; 8540696; 9401051; 9603892; 10952562 [H]