Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
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Accession | NC_009614 |
Length | 5,163,189 |
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The map label for this gene is thiE
Identifier: 150006037
GI number: 150006037
Start: 4395071
End: 4395697
Strand: Direct
Name: thiE
Synonym: BVU_3541
Alternate gene names: 150006037
Gene position: 4395071-4395697 (Clockwise)
Preceding gene: 150006036
Following gene: 150006038
Centisome position: 85.12
GC content: 47.37
Gene sequence:
>627_bases GTGGAGGATAAGACCGTGGAACTTCAATTCATCACTCACTTCACCGACACATATTCCTATTATGATTCCGCACGCATGGC CTTGGAAGGCGGTTGCCGCTGGATCCAGCTACGCATGAAAGACACTCCCGTTGACGAAGTGGAACGGGAAGCCATACGCC TGCAAGGCTTATGCAAAGACTATGGAGCGACATTTGTCATAGACGACCACGTGGAGTTAGTTAAGAAAATTCATGCTGAC GGAGTGCATTTAGGAAAAAAGGACATGCCCGTAGCCGAAGCACGGGGAATATTAGGAAAAGAATTCATCATCGGAGGCAC CGCCAATACATTTGACGATGTAAAGATGCATTACAAAGCCGGAGCTGACTACATCGGCTGTGGCCCGTTCCGTTTTACTA CTACAAAAAAGGATCTCTCTCCAGTGCTGGGACTGGAAGGTTACCGTTCCATTATTCTGCAAATGAAAGAGGCAAATATC CATTTGCCCATCGTTGCTATCGGGGGAATTACTTTGGAAGATATCCCTTCCATCATGGAAACGGGAATCACCGGTATTGC CTTGAGCGGAACCATACTCCGGGCGAAAGACCCGGTAGCGGAAACTAAACGAATCATGAATTTATAA
Upstream 100 bases:
>100_bases GGTATCGCCATAGCGGTAAACAACCGGATGGTTCCCCGTATAGAGTGGGAGAAATGTGTGTTACACCCCAATGACAGTCT GGTAGTCATTAAAGCTGCAT
Downstream 100 bases:
>100_bases TAAAATCACAAAATACAATGAAGAAACTGATTATAGCTGGAAAAGAATTTAATTCCCGTTTATTCCTGGGAACCGGTAAA TTCAATTCAAACACCGTAAT
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MEDKTVELQFITHFTDTYSYYDSARMALEGGCRWIQLRMKDTPVDEVEREAIRLQGLCKDYGATFVIDDHVELVKKIHAD GVHLGKKDMPVAEARGILGKEFIIGGTANTFDDVKMHYKAGADYIGCGPFRFTTTKKDLSPVLGLEGYRSIILQMKEANI HLPIVAIGGITLEDIPSIMETGITGIALSGTILRAKDPVAETKRIMNL
Sequences:
>Translated_208_residues MEDKTVELQFITHFTDTYSYYDSARMALEGGCRWIQLRMKDTPVDEVEREAIRLQGLCKDYGATFVIDDHVELVKKIHAD GVHLGKKDMPVAEARGILGKEFIIGGTANTFDDVKMHYKAGADYIGCGPFRFTTTKKDLSPVLGLEGYRSIILQMKEANI HLPIVAIGGITLEDIPSIMETGITGIALSGTILRAKDPVAETKRIMNL >Mature_208_residues MEDKTVELQFITHFTDTYSYYDSARMALEGGCRWIQLRMKDTPVDEVEREAIRLQGLCKDYGATFVIDDHVELVKKIHAD GVHLGKKDMPVAEARGILGKEFIIGGTANTFDDVKMHYKAGADYIGCGPFRFTTTKKDLSPVLGLEGYRSIILQMKEANI HLPIVAIGGITLEDIPSIMETGITGIALSGTILRAKDPVAETKRIMNL
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family
Homologues:
Organism=Escherichia coli, GI1790426, Length=183, Percent_Identity=31.6939890710383, Blast_Score=82, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6325042, Length=195, Percent_Identity=32.3076923076923, Blast_Score=92, Evalue=7e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): THIE_BACV8 (A6L645)
Other databases:
- EMBL: CP000139 - RefSeq: YP_001300781.1 - ProteinModelPortal: A6L645 - STRING: A6L645 - GeneID: 5304501 - GenomeReviews: CP000139_GR - KEGG: bvu:BVU_3541 - NMPDR: fig|435590.6.peg.3293 - eggNOG: COG0352 - HOGENOM: HBG754477 - OMA: RTCATIC - ProtClustDB: PRK00043 - HAMAP: MF_00097 - InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00693
Pfam domain/function: PF02581 TMP-TENI; SSF51391 TMP_synthase
EC number: =2.5.1.3
Molecular weight: Translated: 23064; Mature: 23064
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDKTVELQFITHFTDTYSYYDSARMALEGGCRWIQLRMKDTPVDEVEREAIRLQGLCKD CCCCEEEEEEEEEHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHH YGATFVIDDHVELVKKIHADGVHLGKKDMPVAEARGILGKEFIIGGTANTFDDVKMHYKA HCCEEEEEHHHHHHHHHHCCCEECCCCCCCHHHHCCCCCCEEEECCCCCCHHHHHHHHHC GADYIGCGPFRFTTTKKDLSPVLGLEGYRSIILQMKEANIHLPIVAIGGITLEDIPSIME CCCEECCCCEEEECCHHHHHHHHCCCHHHHHHEEHCCCCEEEEEEEECCCCHHHHHHHHH TGITGIALSGTILRAKDPVAETKRIMNL CCCCEEEECCEEEECCCCHHHHHHHHCC >Mature Secondary Structure MEDKTVELQFITHFTDTYSYYDSARMALEGGCRWIQLRMKDTPVDEVEREAIRLQGLCKD CCCCEEEEEEEEEHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHH YGATFVIDDHVELVKKIHADGVHLGKKDMPVAEARGILGKEFIIGGTANTFDDVKMHYKA HCCEEEEEHHHHHHHHHHCCCEECCCCCCCHHHHCCCCCCEEEECCCCCCHHHHHHHHHC GADYIGCGPFRFTTTKKDLSPVLGLEGYRSIILQMKEANIHLPIVAIGGITLEDIPSIME CCCEECCCCEEEECCHHHHHHHHCCCHHHHHHEEHCCCCEEEEEEEECCCCHHHHHHHHH TGITGIALSGTILRAKDPVAETKRIMNL CCCCEEEECCEEEECCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA