Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
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Accession | NC_009614 |
Length | 5,163,189 |
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The map label for this gene is aroB [H]
Identifier: 150006009
GI number: 150006009
Start: 4362054
End: 4362962
Strand: Direct
Name: aroB [H]
Synonym: BVU_3507
Alternate gene names: 150006009
Gene position: 4362054-4362962 (Clockwise)
Preceding gene: 150006008
Following gene: 150006024
Centisome position: 84.48
GC content: 39.6
Gene sequence:
>909_bases ATGACTGATAGTAAATGTTACGCAGCTATTGACATCGGCTCTAACGCAGTGCGGTTGTTAATCAAAAAGGTGAAGAATAA TGAGAATCTAGCCAATAAGCGCCTTTCCAAAGTGATGCTCCTGCGTGTACCTCTACGTTTAGGCTTTGATGTTTTTTCCT TGGGAGAAGTGTCGGATGCAAAGGTGATGAAATTGCGCAGGTTGATGAAGGCTTTCCGACAATTGATGAAAATTTATGAA GTGATAAACTATAGGGCTTGTGCCACTTCTGCCATGCGTGATGCCCAAAATGGCAAGTCTGTAATCAAAAAGGTATGGAA AGATACGGGAATCAACATTGAAGTGATTAACGGTCAAGAGGAAGCACGTATGATTTATAACAATCATATCGAGTGTTTGG AAGACCGTGCCGGAAACTATATATATGTAGACGTCGGTGGGGGAAGTACGGAAATAAATTTTCTCATCAACGGAGAGTTG GTACAGTCTCTATCATATAATATAGGTACCGTCCGAATGTTGAGCAATTCTGTAAGAGAAGGTAGTTGGGAACAGATGAA AAGTGACTTGACTCGTTTAACTGCTGATTTTCAAGGTGTCAATATTATAGGTTCGGGTGGAAATATTAATAAACTTTATC GTCTTGCTGATAAAAAGGATAAGAAACAATCACGTTTGCCAATCACTTCTTTGCAGGAGCTGTATGATAAGTTAAAAGTT CTAACTCTTGAACAGCGCATGGAAGAATTTAATCTGAAAACTGACCGTGCAGATGTTATTGTTCCCGCCGCTGGGATATT TCTGATAATTGCAGGTATTGTCAAAGCTGAGTATATCCATGTTCCGGTCATTGGCTTAGCAGATGGTATTATTGACAATT TGTATGCCATAGACCTGAAAACGGAATAA
Upstream 100 bases:
>100_bases GTCGACGGAAGCGGTAAGAACTGCCTTTGGACAACGGATACCGAAGAATCTTTTCGCTCGCAAGAAGAACTATATAAGTA TTACAAATCACATATAACGA
Downstream 100 bases:
>100_bases AAGGAATTGTGCATAGCTGTTTTAACTAGGGATATTCAGTAAATCCTATAAAATTAGCCAACTAATTCATACTAAAAGTA TTGCGAATTAGTTGGCTTTT
Product: putative exopolyphosphatase
Products: NA
Alternate protein names: 3-dehydroquinate synthase; Unknown phosphatase [H]
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MTDSKCYAAIDIGSNAVRLLIKKVKNNENLANKRLSKVMLLRVPLRLGFDVFSLGEVSDAKVMKLRRLMKAFRQLMKIYE VINYRACATSAMRDAQNGKSVIKKVWKDTGINIEVINGQEEARMIYNNHIECLEDRAGNYIYVDVGGGSTEINFLINGEL VQSLSYNIGTVRMLSNSVREGSWEQMKSDLTRLTADFQGVNIIGSGGNINKLYRLADKKDKKQSRLPITSLQELYDKLKV LTLEQRMEEFNLKTDRADVIVPAAGIFLIIAGIVKAEYIHVPVIGLADGIIDNLYAIDLKTE
Sequences:
>Translated_302_residues MTDSKCYAAIDIGSNAVRLLIKKVKNNENLANKRLSKVMLLRVPLRLGFDVFSLGEVSDAKVMKLRRLMKAFRQLMKIYE VINYRACATSAMRDAQNGKSVIKKVWKDTGINIEVINGQEEARMIYNNHIECLEDRAGNYIYVDVGGGSTEINFLINGEL VQSLSYNIGTVRMLSNSVREGSWEQMKSDLTRLTADFQGVNIIGSGGNINKLYRLADKKDKKQSRLPITSLQELYDKLKV LTLEQRMEEFNLKTDRADVIVPAAGIFLIIAGIVKAEYIHVPVIGLADGIIDNLYAIDLKTE >Mature_301_residues TDSKCYAAIDIGSNAVRLLIKKVKNNENLANKRLSKVMLLRVPLRLGFDVFSLGEVSDAKVMKLRRLMKAFRQLMKIYEV INYRACATSAMRDAQNGKSVIKKVWKDTGINIEVINGQEEARMIYNNHIECLEDRAGNYIYVDVGGGSTEINFLINGELV QSLSYNIGTVRMLSNSVREGSWEQMKSDLTRLTADFQGVNIIGSGGNINKLYRLADKKDKKQSRLPITSLQELYDKLKVL TLEQRMEEFNLKTDRADVIVPAAGIFLIIAGIVKAEYIHVPVIGLADGIIDNLYAIDLKTE
Specific function: Conversion Of Pppgpp To Ppgpp. Guanosine Pentaphosphate (Pppgpp) Is A Cytoplasmic Signaling Molecule Which Together With Ppgpp Controls The "Stringent Response", An Adaptive Process That Allows Bacteria To Respond To Amino Acid Starvation, Resulting In T
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI48994966, Length=285, Percent_Identity=23.859649122807, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002658 - InterPro: IPR016037 - InterPro: IPR003695 [H]
Pfam domain/function: PF01761 DHQ_synthase; PF02541 Ppx-GppA [H]
EC number: =4.2.3.4 [H]
Molecular weight: Translated: 33927; Mature: 33796
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSKCYAAIDIGSNAVRLLIKKVKNNENLANKRLSKVMLLRVPLRLGFDVFSLGEVSDA CCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHH KVMKLRRLMKAFRQLMKIYEVINYRACATSAMRDAQNGKSVIKKVWKDTGINIEVINGQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEECCCH EARMIYNNHIECLEDRAGNYIYVDVGGGSTEINFLINGELVQSLSYNIGTVRMLSNSVRE HHHHHHHCCHHHHHHCCCCEEEEEECCCCEEEEEEECHHHHHHHHCCCCHHHHHHHHHCC GSWEQMKSDLTRLTADFQGVNIIGSGGNINKLYRLADKKDKKQSRLPITSLQELYDKLKV CCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHH LTLEQRMEEFNLKTDRADVIVPAAGIFLIIAGIVKAEYIHVPVIGLADGIIDNLYAIDLK HHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHCEEEEEEE TE CC >Mature Secondary Structure TDSKCYAAIDIGSNAVRLLIKKVKNNENLANKRLSKVMLLRVPLRLGFDVFSLGEVSDA CCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHH KVMKLRRLMKAFRQLMKIYEVINYRACATSAMRDAQNGKSVIKKVWKDTGINIEVINGQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEECCCH EARMIYNNHIECLEDRAGNYIYVDVGGGSTEINFLINGELVQSLSYNIGTVRMLSNSVRE HHHHHHHCCHHHHHHCCCCEEEEEECCCCEEEEEEECHHHHHHHHCCCCHHHHHHHHHCC GSWEQMKSDLTRLTADFQGVNIIGSGGNINKLYRLADKKDKKQSRLPITSLQELYDKLKV CCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHH LTLEQRMEEFNLKTDRADVIVPAAGIFLIIAGIVKAEYIHVPVIGLADGIIDNLYAIDLK HHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHCEEEEEEE TE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11889109 [H]