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The map label for this gene is traD [C]

Identifier: 150005980

GI number: 150005980

Start: 4330124

End: 4331752

Strand: Direct

Name: traD [C]

Synonym: BVU_3478

Alternate gene names: 150005980

Gene position: 4330124-4331752 (Clockwise)

Preceding gene: 150005979

Following gene: 150005981

Centisome position: 83.87

GC content: 51.01

Gene sequence:

>1629_bases
ATGAATATGGATCATATGTTTATTATGAGACTGGCAGCCCTGCTTTTTGGCGGCGGCATTGCCAGCTGTCTGTTTCCGGG
AAAATCCCGGATGTCACATGTCCTGTTCCTGCTGTTGGTACTTGCAGAAACAGCTGTCGCACATGCCACTATCCCGGACG
GGTGGTGGTTCCTGCTTCCGGGTGTCGTTTCCGTACTTCTTCGTCTTTCTTTCAAAGGAGGGACAGAAAGCGGAAAGGGC
AGAAAAGCCCTGCTCTCCCTTCACGCTACGGACGGGACAATTATCAGATATTATTACTGGTTCTCCAATTTCCTTGTCTA
TGGAGGAGCCGGTTCCGGCAAGACCAAATCCATAGGCAAACCGCTGATGGAACAGTACATCAGGTCCGGATTCGCCGGTT
TCATCTATGACTTCAAGGATTTTGACTATACCCGGACTGCATACAACCTGATCAGGAAACACGGATACCCCCATGAGTTC
TATTATGTAAATTTCACGGACATGAACCGGACTTACCGCTTCAATCCGCTGGACAGGAGGAATATAAAGGACAGGACGAT
GCTCATGCAGCTGATGGAGGACGTACTGGGCGCGTTGATGCCGCCCACATCCAAACAGGACGAATGGTATACGGGCGCGC
TTGGCATCCTGAACGGCGTGGCGTACAGGCTTTGGGACGAGTTCCCGGAATGTTGCACGCTGCCGCATATCGTCAACTTC
GTGATAAAGGCCGATACGGGACAGCTTCAGGAATTCCTGAAGCTGAACGATATCAGCGCCATGATGGCGGGGGCGTACCT
CAAGGCGGAAGGCAGTGAGAAAACACAGGCCTCCTATGTGTCCACTCTCAGCAACTATGTGGCGAAGCTGGCCACCAATG
AGAACATATGCTATGTGCTGACAGGGAATGACTTCGACTTCAATCTGATTGATCCTGAACATCCGAAACTTTTTGCAATC
AGCAACAACTATGCAACGGAGTCGGTGATATCCCCCGTCATCGCCATGGTAATGAGTATCGCCTCGCGCTCGTTTTCCAT
GGAGAACAGGGTCCCCTTTGTATTTATCCTGGACGAGATGACCACCTTCAAGGTGCGTGACTTCGAGAAGCTGCCTTCCG
TCCTGCGCGAGTACGGGGCGGCGTTCCTGCTGCTCACCCAGTCCGGAGCCAAGCTGGAGAAACTGTACAGCAAACTGGAC
AGGTCGTCCATTGAGGCGAATTTCGGAAATATCTTCCTGGGCCGCACACAGGATGTGGAGGCATTGAAATATTACCCTCT
CTTTTTCGGGAAATACGAGAAGGAGAAGAAGTCCACCAGTTCCGGCAGCAGCGGTGGCGGCCGTAATTCCAGCGTGACCA
TCAGCACACAGAAGGAAGAGATATATGAATCGAAGGACTTCGCTTCATTGGAACCGGGGGAATTTATCGGAATGGGAAAC
CGTTCCAATATCAAAGGGCATTTCAGAAAGAAGTTCAGGCTGTTCGAACTGGAGGAGGAACCGCTGCCGGTAGTCGCGTT
CAGGACGGAGAAGGAAATATCTGACAATTATACCAGAATACTGAAAGATATCGAGAGGGTGCTTGGGATGGAAGACGCAG
AAGTGGATGTAAATTCTTTATTTCCGTGA

Upstream 100 bases:

>100_bases
ACCGGATGTTCCGTTTCATGGTGAATCCGAAACAGGCTCTCATAGCGGAAGCTAAAAGACTGGTAAAGGATGCGCTTACT
GGAAAAATCTAAATCAATTT

Downstream 100 bases:

>100_bases
AATGCTCCGTATCGAAAACCTTTGCTGCCTTGTGGGATTCGATGAAAGGCAGACCGCAACGTTCGTCAAGGGAAAGCTGT
TGGAGTATGCAAGAGAACTC

Product: mobilisation protein C

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MNMDHMFIMRLAALLFGGGIASCLFPGKSRMSHVLFLLLVLAETAVAHATIPDGWWFLLPGVVSVLLRLSFKGGTESGKG
RKALLSLHATDGTIIRYYYWFSNFLVYGGAGSGKTKSIGKPLMEQYIRSGFAGFIYDFKDFDYTRTAYNLIRKHGYPHEF
YYVNFTDMNRTYRFNPLDRRNIKDRTMLMQLMEDVLGALMPPTSKQDEWYTGALGILNGVAYRLWDEFPECCTLPHIVNF
VIKADTGQLQEFLKLNDISAMMAGAYLKAEGSEKTQASYVSTLSNYVAKLATNENICYVLTGNDFDFNLIDPEHPKLFAI
SNNYATESVISPVIAMVMSIASRSFSMENRVPFVFILDEMTTFKVRDFEKLPSVLREYGAAFLLLTQSGAKLEKLYSKLD
RSSIEANFGNIFLGRTQDVEALKYYPLFFGKYEKEKKSTSSGSSGGGRNSSVTISTQKEEIYESKDFASLEPGEFIGMGN
RSNIKGHFRKKFRLFELEEEPLPVVAFRTEKEISDNYTRILKDIERVLGMEDAEVDVNSLFP

Sequences:

>Translated_542_residues
MNMDHMFIMRLAALLFGGGIASCLFPGKSRMSHVLFLLLVLAETAVAHATIPDGWWFLLPGVVSVLLRLSFKGGTESGKG
RKALLSLHATDGTIIRYYYWFSNFLVYGGAGSGKTKSIGKPLMEQYIRSGFAGFIYDFKDFDYTRTAYNLIRKHGYPHEF
YYVNFTDMNRTYRFNPLDRRNIKDRTMLMQLMEDVLGALMPPTSKQDEWYTGALGILNGVAYRLWDEFPECCTLPHIVNF
VIKADTGQLQEFLKLNDISAMMAGAYLKAEGSEKTQASYVSTLSNYVAKLATNENICYVLTGNDFDFNLIDPEHPKLFAI
SNNYATESVISPVIAMVMSIASRSFSMENRVPFVFILDEMTTFKVRDFEKLPSVLREYGAAFLLLTQSGAKLEKLYSKLD
RSSIEANFGNIFLGRTQDVEALKYYPLFFGKYEKEKKSTSSGSSGGGRNSSVTISTQKEEIYESKDFASLEPGEFIGMGN
RSNIKGHFRKKFRLFELEEEPLPVVAFRTEKEISDNYTRILKDIERVLGMEDAEVDVNSLFP
>Mature_542_residues
MNMDHMFIMRLAALLFGGGIASCLFPGKSRMSHVLFLLLVLAETAVAHATIPDGWWFLLPGVVSVLLRLSFKGGTESGKG
RKALLSLHATDGTIIRYYYWFSNFLVYGGAGSGKTKSIGKPLMEQYIRSGFAGFIYDFKDFDYTRTAYNLIRKHGYPHEF
YYVNFTDMNRTYRFNPLDRRNIKDRTMLMQLMEDVLGALMPPTSKQDEWYTGALGILNGVAYRLWDEFPECCTLPHIVNF
VIKADTGQLQEFLKLNDISAMMAGAYLKAEGSEKTQASYVSTLSNYVAKLATNENICYVLTGNDFDFNLIDPEHPKLFAI
SNNYATESVISPVIAMVMSIASRSFSMENRVPFVFILDEMTTFKVRDFEKLPSVLREYGAAFLLLTQSGAKLEKLYSKLD
RSSIEANFGNIFLGRTQDVEALKYYPLFFGKYEKEKKSTSSGSSGGGRNSSVTISTQKEEIYESKDFASLEPGEFIGMGN
RSNIKGHFRKKFRLFELEEEPLPVVAFRTEKEISDNYTRILKDIERVLGMEDAEVDVNSLFP

Specific function: Trad Is A Cell Envelope Protein. The Function Of Trad Is Unknown But It Is Essential For DNA Transfer. It May Form Or May Be Part Of A Non-Specific Pore For DNA Export, Or It May Directly Energizes DNA Transport. [C]

COG id: COG3505

COG function: function code U; Type IV secretory pathway, VirD4 components

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61353; Mature: 61353

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMDHMFIMRLAALLFGGGIASCLFPGKSRMSHVLFLLLVLAETAVAHATIPDGWWFLLP
CCCCHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
GVVSVLLRLSFKGGTESGKGRKALLSLHATDGTIIRYYYWFSNFLVYGGAGSGKTKSIGK
HHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEHHEEHHCEEEECCCCCCCCCCCCH
PLMEQYIRSGFAGFIYDFKDFDYTRTAYNLIRKHGYPHEFYYVNFTDMNRTYRFNPLDRR
HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEECCCCCC
NIKDRTMLMQLMEDVLGALMPPTSKQDEWYTGALGILNGVAYRLWDEFPECCTLPHIVNF
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCCHHHHHH
VIKADTGQLQEFLKLNDISAMMAGAYLKAEGSEKTQASYVSTLSNYVAKLATNENICYVL
HEECCHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE
TGNDFDFNLIDPEHPKLFAISNNYATESVISPVIAMVMSIASRSFSMENRVPFVFILDEM
ECCCCEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
TTFKVRDFEKLPSVLREYGAAFLLLTQSGAKLEKLYSKLDRSSIEANFGNIFLGRTQDVE
CEEEHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCH
ALKYYPLFFGKYEKEKKSTSSGSSGGGRNSSVTISTQKEEIYESKDFASLEPGEFIGMGN
HHEECHHHHCCHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHCCCCCCCCCCCCEEECCC
RSNIKGHFRKKFRLFELEEEPLPVVAFRTEKEISDNYTRILKDIERVLGMEDAEVDVNSL
CCCCCHHHHHHEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC
FP
CC
>Mature Secondary Structure
MNMDHMFIMRLAALLFGGGIASCLFPGKSRMSHVLFLLLVLAETAVAHATIPDGWWFLLP
CCCCHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
GVVSVLLRLSFKGGTESGKGRKALLSLHATDGTIIRYYYWFSNFLVYGGAGSGKTKSIGK
HHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEHHEEHHCEEEECCCCCCCCCCCCH
PLMEQYIRSGFAGFIYDFKDFDYTRTAYNLIRKHGYPHEFYYVNFTDMNRTYRFNPLDRR
HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEECCCCCC
NIKDRTMLMQLMEDVLGALMPPTSKQDEWYTGALGILNGVAYRLWDEFPECCTLPHIVNF
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCCHHHHHH
VIKADTGQLQEFLKLNDISAMMAGAYLKAEGSEKTQASYVSTLSNYVAKLATNENICYVL
HEECCHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE
TGNDFDFNLIDPEHPKLFAISNNYATESVISPVIAMVMSIASRSFSMENRVPFVFILDEM
ECCCCEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
TTFKVRDFEKLPSVLREYGAAFLLLTQSGAKLEKLYSKLDRSSIEANFGNIFLGRTQDVE
CEEEHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCH
ALKYYPLFFGKYEKEKKSTSSGSSGGGRNSSVTISTQKEEIYESKDFASLEPGEFIGMGN
HHEECHHHHCCHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHCCCCCCCCCCCCEEECCC
RSNIKGHFRKKFRLFELEEEPLPVVAFRTEKEISDNYTRILKDIERVLGMEDAEVDVNSL
CCCCCHHHHHHEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC
FP
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA