| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150005921
Identifier: 150005921
GI number: 150005921
Start: 4261345
End: 4261878
Strand: Direct
Name: 150005921
Synonym: BVU_3417
Alternate gene names: NA
Gene position: 4261345-4261878 (Clockwise)
Preceding gene: 150005920
Following gene: 150005922
Centisome position: 82.53
GC content: 52.06
Gene sequence:
>534_bases ATGCACCATCCGGTTTGCTCCGTGTCTGCGACACCAAGCAAAGCTCGGTTGATAGGCTTTGGCTACAAATGGAAGCTTCA GTCCATCGCCACTGTGAGAAACAGCAGGCTTTCACTTTTCTCCACTCAGCTGTTTCTCACAGTGTCAATGAGGTTGGGAA GCTGGTCTTCAAACGGTGATTTGCTCGATGGTTCTACCGAACGCAGGCTGACGCTTGCGGAAGTAGAGCCATCGAATGGC TTTGGAGGCTGGCTCACAGATGTTGGCCGCCACTTCCGACTTATCGTATTGCATGCGATGCCGGAAGTGACGACCTTTTG GGAAGATGCACCATCCGGTTTGCTCCGTGTCTGCGACACCAAGCAAAGCCCGGCTGATTGGCTTTTACTACGAGTGGAAA CTCCAGTCCGTTGCCATAGAGAGAACCTACAAGGCTCCACTTCGCTTCACTTTGTAGGTTCTCACAACGGCAACGGTTTT CGGGAATGTGCATCTTCAAGACGATCGGAATGCTGGGTTACGCGGACTTTCTGA
Upstream 100 bases:
>100_bases GAGCCATCGAATGGTTTTGGAGGCTGGCTCACAGATGTTGGCCGCCACTTCCGACTTATCGTATTGCATGCGATGCCGGA AGTGACGACCTTTTGGGAAG
Downstream 100 bases:
>100_bases GGAATATGTTTGAGATGACTTGTTAGAACTAATCTTTTTCCTTGGAGTCATGGTCGGGAAAGTCTTGAAAACCATTGGAG CTTCTTGGTCCAACTCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MHHPVCSVSATPSKARLIGFGYKWKLQSIATVRNSRLSLFSTQLFLTVSMRLGSWSSNGDLLDGSTERRLTLAEVEPSNG FGGWLTDVGRHFRLIVLHAMPEVTTFWEDAPSGLLRVCDTKQSPADWLLLRVETPVRCHRENLQGSTSLHFVGSHNGNGF RECASSRRSECWVTRTF
Sequences:
>Translated_177_residues MHHPVCSVSATPSKARLIGFGYKWKLQSIATVRNSRLSLFSTQLFLTVSMRLGSWSSNGDLLDGSTERRLTLAEVEPSNG FGGWLTDVGRHFRLIVLHAMPEVTTFWEDAPSGLLRVCDTKQSPADWLLLRVETPVRCHRENLQGSTSLHFVGSHNGNGF RECASSRRSECWVTRTF >Mature_177_residues MHHPVCSVSATPSKARLIGFGYKWKLQSIATVRNSRLSLFSTQLFLTVSMRLGSWSSNGDLLDGSTERRLTLAEVEPSNG FGGWLTDVGRHFRLIVLHAMPEVTTFWEDAPSGLLRVCDTKQSPADWLLLRVETPVRCHRENLQGSTSLHFVGSHNGNGF RECASSRRSECWVTRTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19850; Mature: 19850
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHPVCSVSATPSKARLIGFGYKWKLQSIATVRNSRLSLFSTQLFLTVSMRLGSWSSNGD CCCCCCCCCCCCCCEEEEECCCEEEHHHHHHHHCCCHHHEEEEEEEEEEEEECCCCCCCC LLDGSTERRLTLAEVEPSNGFGGWLTDVGRHFRLIVLHAMPEVTTFWEDAPSGLLRVCDT EECCCCCCEEEEEEECCCCCCCCHHHHHCCCEEEEEEECCCCHHHHHCCCCCHHHEECCC KQSPADWLLLRVETPVRCHRENLQGSTSLHFVGSHNGNGFRECASSRRSECWVTRTF CCCCCCEEEEEECCCHHHHHHCCCCCCEEEEEECCCCCHHHHHHCCCCCCEEEEECC >Mature Secondary Structure MHHPVCSVSATPSKARLIGFGYKWKLQSIATVRNSRLSLFSTQLFLTVSMRLGSWSSNGD CCCCCCCCCCCCCCEEEEECCCEEEHHHHHHHHCCCHHHEEEEEEEEEEEEECCCCCCCC LLDGSTERRLTLAEVEPSNGFGGWLTDVGRHFRLIVLHAMPEVTTFWEDAPSGLLRVCDT EECCCCCCEEEEEEECCCCCCCCHHHHHCCCEEEEEEECCCCHHHHHCCCCCHHHEECCC KQSPADWLLLRVETPVRCHRENLQGSTSLHFVGSHNGNGFRECASSRRSECWVTRTF CCCCCCEEEEEECCCHHHHHHCCCCCCEEEEEECCCCCHHHHHHCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA