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The map label for this gene is 150005897

Identifier: 150005897

GI number: 150005897

Start: 4236884

End: 4237423

Strand: Direct

Name: 150005897

Synonym: BVU_3393

Alternate gene names: NA

Gene position: 4236884-4237423 (Clockwise)

Preceding gene: 150005896

Following gene: 150005898

Centisome position: 82.06

GC content: 51.11

Gene sequence:

>540_bases
ATGGAAAAGAAAATAATCGGTCGCTGTCCCTTGTGTGGCGGCAACGTGGTAAAGACCTGCAAGGGCTACCGCTGTGAGAA
CAACATTGCCGAACAGCCTACCTGTGTGCTGAATATCAACGGTATTATCGGCAACCGCAAGATGAGTGACGAAGAAATTA
CCGAACTGTTGGAGCGCCGCTTTATCCTGTTGGACGGCTTTGCTTCCAAGGAGGGAAAGGTTTTCCCTTCCGTGCTGGAA
CTGGCCGACAACGGTGCCATCAACATACAGTCCATCATTGGCAAATGCCCGCATTGCGGTGGCGATATTCGGGTGGGTAC
ACGCGCTTTCAACTGTTCCAATTACAGCAACCAGCAGGCGCCGTGCAACTTCGCCATCTGGCGCAACATTGGTGGACACC
AGCTGAGCTTGACAGAAGCCAAGGAAATCTGTGAAAAAGAAATTACCTCCAACGAACTGGAAATGTACCGCGACGACGGC
ACCATCTACCGCAAGCGTCTCGGTCTTTCTCCCGATAAACTCCAAATTGTGAAGATATGA

Upstream 100 bases:

>100_bases
TAAATAGGTAAACTAACTTACTAATCAGTTAATAACAAAGTAATAAAGTAAGGAAATAAGAAAGTAATAAAGTAAACAAA
TCATCCAAAAACAAAAGCGT

Downstream 100 bases:

>100_bases
AACCGGGAATGAAACTCACTATCCTGCTGGTGACCGTCGTCTGCTTCTGGAGCGGACTGTTTTACTTCGCCAGCTGTTCC
GACCATCCCGAACAACGGGC

Product: putative DNA topoisomerase I

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MEKKIIGRCPLCGGNVVKTCKGYRCENNIAEQPTCVLNINGIIGNRKMSDEEITELLERRFILLDGFASKEGKVFPSVLE
LADNGAINIQSIIGKCPHCGGDIRVGTRAFNCSNYSNQQAPCNFAIWRNIGGHQLSLTEAKEICEKEITSNELEMYRDDG
TIYRKRLGLSPDKLQIVKI

Sequences:

>Translated_179_residues
MEKKIIGRCPLCGGNVVKTCKGYRCENNIAEQPTCVLNINGIIGNRKMSDEEITELLERRFILLDGFASKEGKVFPSVLE
LADNGAINIQSIIGKCPHCGGDIRVGTRAFNCSNYSNQQAPCNFAIWRNIGGHQLSLTEAKEICEKEITSNELEMYRDDG
TIYRKRLGLSPDKLQIVKI
>Mature_179_residues
MEKKIIGRCPLCGGNVVKTCKGYRCENNIAEQPTCVLNINGIIGNRKMSDEEITELLERRFILLDGFASKEGKVFPSVLE
LADNGAINIQSIIGKCPHCGGDIRVGTRAFNCSNYSNQQAPCNFAIWRNIGGHQLSLTEAKEICEKEITSNELEMYRDDG
TIYRKRLGLSPDKLQIVKI

Specific function: Unknown

COG id: COG0550

COG function: function code L; Topoisomerase IA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19939; Mature: 19939

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKIIGRCPLCGGNVVKTCKGYRCENNIAEQPTCVLNINGIIGNRKMSDEEITELLERR
CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCEECCCCCCHHHHHHHHHHH
FILLDGFASKEGKVFPSVLELADNGAINIQSIIGKCPHCGGDIRVGTRAFNCSNYSNQQA
EEEEECCCCCCCCCCHHHHHHHCCCCEEHHHHHCCCCCCCCCEEECEEEEECCCCCCCCC
PCNFAIWRNIGGHQLSLTEAKEICEKEITSNELEMYRDDGTIYRKRLGLSPDKLQIVKI
CCCEEEECCCCCCEEEHHHHHHHHHHHCCCCHHEEEECCCCEEHHHCCCCCCCEEEEEC
>Mature Secondary Structure
MEKKIIGRCPLCGGNVVKTCKGYRCENNIAEQPTCVLNINGIIGNRKMSDEEITELLERR
CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCEECCCCCCHHHHHHHHHHH
FILLDGFASKEGKVFPSVLELADNGAINIQSIIGKCPHCGGDIRVGTRAFNCSNYSNQQA
EEEEECCCCCCCCCCHHHHHHHCCCCEEHHHHHCCCCCCCCCEEECEEEEECCCCCCCCC
PCNFAIWRNIGGHQLSLTEAKEICEKEITSNELEMYRDDGTIYRKRLGLSPDKLQIVKI
CCCEEEECCCCCCEEEHHHHHHHHHHHCCCCHHEEEECCCCEEHHHCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA