| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150005882
Identifier: 150005882
GI number: 150005882
Start: 4220310
End: 4220906
Strand: Direct
Name: 150005882
Synonym: BVU_3378
Alternate gene names: NA
Gene position: 4220310-4220906 (Clockwise)
Preceding gene: 150005881
Following gene: 150005883
Centisome position: 81.74
GC content: 51.93
Gene sequence:
>597_bases ATGCTTATTGAATCATTAGCACAGAAAACGAAACTCGCCCTGATGACGGTGCTGGCCACGATAGGTGGCTGCACCCTCAT CTGCGGGTTCACCGTCTGGTGCTGCATCTCGCTCGTGACGAAAGAGCGCGAGCAGATCTACATACTGGACGGTGACATTC CCTTCCTGGCACAGCGTGCCCGGCTGGAAGCGAACTTCACGATGGAAGCCAAAGCCCATATCCAGCTCTTCCATCAGTAC TTCTTTAATCTGCCTCCTGACAACGACTACATCAAGTGGACGGTCGGCAAGGCGATGTACATGGCAGACGGTACGGCCCT CAAACAGAAGCAGGCTTTGGATGAGAACGGATTCTACTCCGACATCATCTCTTCCTCGGCAGTCTGTACCATCATGTGTG ACTCTATTCAGTTCGACGAACATGAACGGAAGTTTACCTACTACGGAACGCAGCTCATCAAGCGCCGAACCAAGGACTTG AAGCGCAGCATGATTACCACGGGGTACATTGAATCGGTTCCCCGAACCCGGAATAATCCGCATGGACTGCTGATTACCAA CTGGCGAACACTGGAGAATAAAGATCTCGATTACTGA
Upstream 100 bases:
>100_bases TGCAGCCGGCGGAGCGGCAGGTTCCGTAGTGGGCGGTGCCATTTCCATGATCAAGCCCAAGTCCAAGTCAGGAAAGAAAT AATCTCTAATCCCAACGAAT
Downstream 100 bases:
>100_bases TGATAATCAGGTAATTACTCACAAATTACCGAAGAATTACTCAGTAATTACCAAGTAATAACCAAGAATAACTGAAGAAT AACCATCAAATAACTGCCTA
Product: conjugate transposon protein TraK
Products: NA
Alternate protein names: Plasmid Transfer Protein; Conjugate Transposon Protein; Transposon TraK Protein; F Pilus Assembly Protein TraK; Conserved Protein Found In Conjugate Transposon TraK; Conjugate Transposon Protein TraK
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MLIESLAQKTKLALMTVLATIGGCTLICGFTVWCCISLVTKEREQIYILDGDIPFLAQRARLEANFTMEAKAHIQLFHQY FFNLPPDNDYIKWTVGKAMYMADGTALKQKQALDENGFYSDIISSSAVCTIMCDSIQFDEHERKFTYYGTQLIKRRTKDL KRSMITTGYIESVPRTRNNPHGLLITNWRTLENKDLDY
Sequences:
>Translated_198_residues MLIESLAQKTKLALMTVLATIGGCTLICGFTVWCCISLVTKEREQIYILDGDIPFLAQRARLEANFTMEAKAHIQLFHQY FFNLPPDNDYIKWTVGKAMYMADGTALKQKQALDENGFYSDIISSSAVCTIMCDSIQFDEHERKFTYYGTQLIKRRTKDL KRSMITTGYIESVPRTRNNPHGLLITNWRTLENKDLDY >Mature_198_residues MLIESLAQKTKLALMTVLATIGGCTLICGFTVWCCISLVTKEREQIYILDGDIPFLAQRARLEANFTMEAKAHIQLFHQY FFNLPPDNDYIKWTVGKAMYMADGTALKQKQALDENGFYSDIISSSAVCTIMCDSIQFDEHERKFTYYGTQLIKRRTKDL KRSMITTGYIESVPRTRNNPHGLLITNWRTLENKDLDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22788; Mature: 22788
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIESLAQKTKLALMTVLATIGGCTLICGFTVWCCISLVTKEREQIYILDGDIPFLAQRA CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHH RLEANFTMEAKAHIQLFHQYFFNLPPDNDYIKWTVGKAMYMADGTALKQKQALDENGFYS HHCCCEEEHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEECCCHHHHHHHCCCCCCHH DIISSSAVCTIMCDSIQFDEHERKFTYYGTQLIKRRTKDLKRSMITTGYIESVPRTRNNP HHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC HGLLITNWRTLENKDLDY CEEEEECCEECCCCCCCC >Mature Secondary Structure MLIESLAQKTKLALMTVLATIGGCTLICGFTVWCCISLVTKEREQIYILDGDIPFLAQRA CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHH RLEANFTMEAKAHIQLFHQYFFNLPPDNDYIKWTVGKAMYMADGTALKQKQALDENGFYS HHCCCEEEHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEECCCHHHHHHHCCCCCCHH DIISSSAVCTIMCDSIQFDEHERKFTYYGTQLIKRRTKDLKRSMITTGYIESVPRTRNNP HHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC HGLLITNWRTLENKDLDY CEEEEECCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA